RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 RIPOR2Q9Y4F9 1068 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 COL4A1P02462 1669 aa15.22■□□□□ 0.03
CPNE6-204ENST00000557829 ECM29Q5VYK3 1845 aa15.21■□□□□ 0.03
CPNE6-204ENST00000557829 PNPLA7Q6ZV29 1317 aa15.21■□□□□ 0.03
CPNE6-204ENST00000557829 KIF28PB7ZC32 967 aa15.21■□□□□ 0.03
CPNE6-204ENST00000557829 HMGB2P26583 209 aaKnown RBP15.21■□□□□ 0.03
CPNE6-204ENST00000557829 TRDNQ13061 729 aa15.21■□□□□ 0.03
CPNE6-204ENST00000557829 CCDC93Q567U6 631 aa15.21■□□□□ 0.03
CPNE6-204ENST00000557829 CPLX2Q6PUV4 134 aaKnown RBP15.21■□□□□ 0.03
CPNE6-204ENST00000557829 ERCC4Q92889 916 aaPredicted RBP15.21■□□□□ 0.03
CPNE6-204ENST00000557829 ANGEL1Q9UNK9 670 aaKnown RBP15.21■□□□□ 0.03
CPNE6-204ENST00000557829 GPAA1O43292 621 aa15.21■□□□□ 0.02
CPNE6-204ENST00000557829 TM4SF1P30408 202 aa15.21■□□□□ 0.02
CPNE6-204ENST00000557829 ADORA1P30542 326 aa15.21■□□□□ 0.02
CPNE6-204ENST00000557829 SYKP43405 635 aa15.21■□□□□ 0.02
CPNE6-204ENST00000557829 HAND2P61296 217 aa15.21■□□□□ 0.02
CPNE6-204ENST00000557829 FANCCQ00597 558 aa15.21■□□□□ 0.02
CPNE6-204ENST00000557829 DDR1Q08345 913 aa15.21■□□□□ 0.02
CPNE6-204ENST00000557829 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.02
CPNE6-204ENST00000557829 SF3B3Q15393 1217 aaKnown RBP15.21■□□□□ 0.02
CPNE6-204ENST00000557829 KMT5BQ4FZB7 885 aa15.21■□□□□ 0.02
CPNE6-204ENST00000557829 KRT222Q8N1A0 295 aa15.21■□□□□ 0.02
CPNE6-204ENST00000557829 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.21■□□□□ 0.02
CPNE6-204ENST00000557829 ZAP70P43403 619 aa15.2■□□□□ 0.02
CPNE6-204ENST00000557829 SLC15A2Q16348 729 aa15.2■□□□□ 0.02
CPNE6-204ENST00000557829 FCHSD1Q86WN1 690 aa15.2■□□□□ 0.02
CPNE6-204ENST00000557829 PUS7LQ9H0K6 701 aaKnown RBP15.2■□□□□ 0.02
CPNE6-204ENST00000557829 CNNM1Q9NRU3 951 aa15.2■□□□□ 0.02
CPNE6-204ENST00000557829 RTL9Q8NET4 1388 aa15.2■□□□□ 0.02
CPNE6-204ENST00000557829 PHLPP2Q6ZVD8 1323 aa15.2■□□□□ 0.02
CPNE6-204ENST00000557829 MYO5AQ9Y4I1 1855 aaKnown RBP15.2■□□□□ 0.02
CPNE6-204ENST00000557829 WDHD1O75717 1129 aaPredicted RBP15.19■□□□□ 0.02
CPNE6-204ENST00000557829 PTPAQ15257 358 aa15.19■□□□□ 0.02
CPNE6-204ENST00000557829 METTL24Q5JXM2 366 aa15.19■□□□□ 0.02
CPNE6-204ENST00000557829 TMEM87BQ96K49 555 aa15.19■□□□□ 0.02
CPNE6-204ENST00000557829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.19■□□□□ 0.02
CPNE6-204ENST00000557829 SH2B2O14492 632 aaPredicted RBP15.19■□□□□ 0.02
CPNE6-204ENST00000557829 CUTAO60888 179 aa15.19■□□□□ 0.02
CPNE6-204ENST00000557829 PPFIA3O75145 1194 aa15.19■□□□□ 0.02
CPNE6-204ENST00000557829 ADD2P35612 726 aa15.19■□□□□ 0.02
CPNE6-204ENST00000557829 PRR5LQ6MZQ0 368 aa15.19■□□□□ 0.02
CPNE6-204ENST00000557829 CNBD1Q8NA66 436 aa15.19■□□□□ 0.02
CPNE6-204ENST00000557829 ALG1Q9BT22 464 aa15.19■□□□□ 0.02
CPNE6-204ENST00000557829 TMX1Q9H3N1 280 aa15.19■□□□□ 0.02
CPNE6-204ENST00000557829 NPHP1O15259 732 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 SERPINB2P05120 415 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 MYL5Q02045 173 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 UBE3CQ15386 1083 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 RESP18Q5W5W9 173 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 SRRTQ9BXP5 876 aaKnown RBP15.18■□□□□ 0.02
CPNE6-204ENST00000557829 HSD3B7Q9H2F3 369 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 ZHX1Q9UKY1 873 aaPredicted RBP15.18■□□□□ 0.02
CPNE6-204ENST00000557829 STK36Q9NRP7 1315 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 POLRMTO00411 1230 aaKnown RBP15.18■□□□□ 0.02
CPNE6-204ENST00000557829 METAP2P50579 478 aaKnown RBP eCLIP15.18■□□□□ 0.02
CPNE6-204ENST00000557829 ETF1P62495 437 aaKnown RBP15.18■□□□□ 0.02
CPNE6-204ENST00000557829 SCARF1Q14162 830 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 ALX1Q15699 326 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 KRT40Q6A162 431 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 VGLL2Q8N8G2 317 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 FBXW7Q969H0 707 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 MAP3K14Q99558 947 aa15.18■□□□□ 0.02
CPNE6-204ENST00000557829 MROH7-TTC4A0A0A0MT08 1334 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 H2AFXP16104 143 aaPredicted RBP15.17■□□□□ 0.02
CPNE6-204ENST00000557829 ELF2Q15723 593 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 FBXO38Q6PIJ6 1188 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 OLFM4Q6UX06 510 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 SGMS1Q86VZ5 419 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 VPS37DQ86XT2 251 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 FLAD1Q8NFF5 587 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 HELBQ8NG08 1087 aaPredicted RBP15.17■□□□□ 0.02
CPNE6-204ENST00000557829 NLRP3Q96P20 1036 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 CHD4Q14839 1912 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 BIN1O00499 593 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 UBASH3AP57075 661 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 SHC4Q6S5L8 630 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 NOL10Q9BSC4 688 aaKnown RBP15.17■□□□□ 0.02
CPNE6-204ENST00000557829 NBPF3Q9H094 633 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 STK32BQ9NY57 414 aa15.17■□□□□ 0.02
CPNE6-204ENST00000557829 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.17■□□□□ 0.02
CPNE6-204ENST00000557829 TNRC6CQ9HCJ0 1690 aaKnown RBP15.16■□□□□ 0.02
CPNE6-204ENST00000557829 MSL1Q68DK7 614 aa15.16■□□□□ 0.02
CPNE6-204ENST00000557829 APOA5Q6Q788 366 aa15.16■□□□□ 0.02
CPNE6-204ENST00000557829 SYT10Q6XYQ8 523 aa15.16■□□□□ 0.02
CPNE6-204ENST00000557829 VSTM4Q8IW00 320 aa15.16■□□□□ 0.02
CPNE6-204ENST00000557829 CELF1Q92879 486 aaKnown RBP15.16■□□□□ 0.02
CPNE6-204ENST00000557829 MPHOSPH8Q99549 860 aa15.16■□□□□ 0.02
CPNE6-204ENST00000557829 HOOK1Q9UJC3 728 aaKnown RBP15.16■□□□□ 0.02
CPNE6-204ENST00000557829 NID2Q14112 1375 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 SLFN14P0C7P3 912 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 LMOD1P29536 600 aaPredicted RBP15.15■□□□□ 0.02
CPNE6-204ENST00000557829 IGHMBP2P38935 993 aaKnown RBP15.15■□□□□ 0.02
CPNE6-204ENST00000557829 LIFRP42702 1097 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 TRIM29Q14134 588 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 BMS1Q14692 1282 aaKnown RBP15.15■□□□□ 0.02
CPNE6-204ENST00000557829 NTRK3Q16288 839 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 CCDC102BQ68D86 513 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 WASF1Q92558 559 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 SNAP23O00161 211 aa15.15■□□□□ 0.02
CPNE6-204ENST00000557829 ZSCAN12O43309 604 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms