RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 GNALP38405 381 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 CCNFP41002 786 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 GUCY2FP51841 1108 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 NEUROD1Q13562 356 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 PPP2R5AQ15172 486 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 WWC2Q6AWC2 1192 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 OVOS1Q6IE37 1185 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 AFAP1L2Q8N4X5 818 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 DDX54Q8TDD1 881 aaKnown RBP9.2□□□□□ -0.94
ZEB1-210ENST00000557827 KLHL6Q8WZ60 621 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 TRERF1Q96PN7 1200 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 SLC9A7Q96T83 725 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 DHRS4Q9BTZ2 278 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 RUSC1Q9BVN2 902 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 CACNA2D2Q9NY47 1150 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 REV1Q9UBZ9 1251 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 DNMT3LQ9UJW3 386 aa9.2□□□□□ -0.94
ZEB1-210ENST00000557827 GSTP1P09211 210 aaKnown RBP9.19□□□□□ -0.94
ZEB1-210ENST00000557827 PTPRAP18433 802 aa9.19□□□□□ -0.94
ZEB1-210ENST00000557827 EIF2AK2P19525 551 aaKnown RBP9.19□□□□□ -0.94
ZEB1-210ENST00000557827 LRRC41Q15345 812 aa9.19□□□□□ -0.94
ZEB1-210ENST00000557827 PCSK7Q16549 785 aa9.19□□□□□ -0.94
ZEB1-210ENST00000557827 NLRC3Q7RTR2 1065 aa9.19□□□□□ -0.94
ZEB1-210ENST00000557827 TARS2Q9BW92 718 aaKnown RBP9.19□□□□□ -0.94
ZEB1-210ENST00000557827 PCGF6Q9BYE7 350 aa9.19□□□□□ -0.94
ZEB1-210ENST00000557827 ADAM19Q9H013 955 aa9.19□□□□□ -0.94
ZEB1-210ENST00000557827 PRDM16Q9HAZ2 1276 aa9.19□□□□□ -0.94
ZEB1-210ENST00000557827 PCDHA4Q9UN74 947 aa9.19□□□□□ -0.94
ZEB1-210ENST00000557827 TNFRSF10CO14798 259 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 SLC7A5Q01650 507 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 MCL1Q07820 350 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 UBE4AQ14139 1066 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 INPP5AQ14642 412 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 FAM209AQ5JX71 171 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 WIPI1Q5MNZ9 446 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-210ENST00000557827 CNNM4Q6P4Q7 775 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 ABHD17AQ96GS6 310 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 CDC6Q99741 560 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 APBA2Q99767 749 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 CNNM2Q9H8M5 875 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 DNAJB12Q9NXW2 375 aaKnown RBP9.18□□□□□ -0.94
ZEB1-210ENST00000557827 MRPS23Q9Y3D9 190 aaKnown RBP9.18□□□□□ -0.94
ZEB1-210ENST00000557827 SNCAIPQ9Y6H5 919 aa9.18□□□□□ -0.94
ZEB1-210ENST00000557827 DNAJC25-GNG10A0A024R161 153 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 FAM86C2PA6NEL3 165 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 DNAJA2O60884 412 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 KATNA1O75449 491 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 RASGRP1O95267 797 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 EYA4O95677 639 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 PLCG1P19174 1290 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 AP3B2Q13367 1082 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.17□□□□□ -0.94
ZEB1-210ENST00000557827 GNPTABQ3T906 1256 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 CDCP2Q5VXM1 449 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 STRA8Q7Z7C7 330 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 LRRTM3Q86VH5 581 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 MICALL1Q8N3F8 863 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 GPBAR1Q8TDU6 330 aa9.17□□□□□ -0.94
ZEB1-210ENST00000557827 A0A1W2PQU0 124 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 H7C1W4 665 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 AGRPO00253 132 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 CAND2O75155 1236 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 BMP1P13497 986 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 SDSP20132 328 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 IKBKEQ14164 716 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 LAPTM4AQ15012 233 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 DBN1Q16643 649 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 LRFN4Q6PJG9 635 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 DDX46Q7L014 1031 aaKnown RBP9.16□□□□□ -0.94
ZEB1-210ENST00000557827 RIN3Q8TB24 985 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 PLPPR2Q96GM1 343 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 IPO9Q96P70 1041 aaKnown RBP9.16□□□□□ -0.94
ZEB1-210ENST00000557827 ASPSCR1Q9BZE9 553 aa9.16□□□□□ -0.94
ZEB1-210ENST00000557827 ZC3H12CQ9C0D7 883 aaKnown RBP9.16□□□□□ -0.94
ZEB1-210ENST00000557827 SH2B1Q9NRF2 756 aaPredicted RBP9.16□□□□□ -0.94
ZEB1-210ENST00000557827 ZNF214Q9UL59 606 aaPredicted RBP9.16□□□□□ -0.94
ZEB1-210ENST00000557827 SHTN1A0MZ66 631 aa9.15□□□□□ -0.94
ZEB1-210ENST00000557827 SOX1O00570 391 aaPredicted RBP9.15□□□□□ -0.94
ZEB1-210ENST00000557827 TBC1D8BQ0IIM8 1120 aa9.15□□□□□ -0.94
ZEB1-210ENST00000557827 SV2CQ496J9 727 aa9.15□□□□□ -0.94
ZEB1-210ENST00000557827 HDXQ7Z353 690 aa9.15□□□□□ -0.94
ZEB1-210ENST00000557827 TRIM46Q7Z4K8 759 aa9.15□□□□□ -0.94
ZEB1-210ENST00000557827 ACSBG1Q96GR2 724 aa9.15□□□□□ -0.94
ZEB1-210ENST00000557827 ZFP42Q96MM3 310 aa9.15□□□□□ -0.94
ZEB1-210ENST00000557827 UBE2OQ9C0C9 1292 aaKnown RBP9.15□□□□□ -0.94
ZEB1-210ENST00000557827 LACRTQ9GZZ8 138 aa9.15□□□□□ -0.94
ZEB1-210ENST00000557827 ARHGEF4Q9NR80 690 aa9.15□□□□□ -0.94
ZEB1-210ENST00000557827 INTS7Q9NVH2 962 aaKnown RBP9.15□□□□□ -0.94
ZEB1-210ENST00000557827 TRBV23-1A0A0A0MS06 115 aa9.14□□□□□ -0.95
ZEB1-210ENST00000557827 TRAV20A0A0B4J274 112 aa9.14□□□□□ -0.95
ZEB1-210ENST00000557827 EIF4EBP3O60516 100 aaPredicted RBP9.14□□□□□ -0.95
ZEB1-210ENST00000557827 ARAFP10398 606 aa9.14□□□□□ -0.95
ZEB1-210ENST00000557827 CPEP16870 476 aa9.14□□□□□ -0.95
ZEB1-210ENST00000557827 RAB27AP51159 221 aa9.14□□□□□ -0.95
ZEB1-210ENST00000557827 TMEM201Q5SNT2 666 aa9.14□□□□□ -0.95
ZEB1-210ENST00000557827 FAM182BQ5T319 152 aa9.14□□□□□ -0.95
ZEB1-210ENST00000557827 YOD1Q5VVQ6 348 aaPredicted RBP9.14□□□□□ -0.95
ZEB1-210ENST00000557827 SCUBE1Q8IWY4 988 aa9.14□□□□□ -0.95
ZEB1-210ENST00000557827 DDX1Q92499 740 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms