RNA–Protein interactions for RNA: ENST00000557659.5

CNIH1-206, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2

Gene CNIH1, Length 856 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-206ENST00000557659 TEX11Q8IYF3 940 aa13.87□□□□□ -0.19
CNIH1-206ENST00000557659 PI4K2BQ8TCG2 481 aa13.87□□□□□ -0.19
CNIH1-206ENST00000557659 ZNF384Q8TF68 577 aa13.87□□□□□ -0.19
CNIH1-206ENST00000557659 KLRG1Q96E93 195 aa13.87□□□□□ -0.19
CNIH1-206ENST00000557659 AATFQ9NY61 560 aaKnown RBP eCLIP13.87□□□□□ -0.19
CNIH1-206ENST00000557659 COLQQ9Y215 455 aaPredicted RBP13.87□□□□□ -0.19
CNIH1-206ENST00000557659 ATRNL1Q5VV63 1379 aa13.86□□□□□ -0.19
CNIH1-206ENST00000557659 MAGEB6P1A0A0J9YX57 407 aa13.86□□□□□ -0.19
CNIH1-206ENST00000557659 POTEFA5A3E0 1075 aa13.86□□□□□ -0.19
CNIH1-206ENST00000557659 WDHD1O75717 1129 aaPredicted RBP13.86□□□□□ -0.19
CNIH1-206ENST00000557659 ADD2P35612 726 aa13.86□□□□□ -0.19
CNIH1-206ENST00000557659 RGMBQ6NW40 437 aa13.86□□□□□ -0.19
CNIH1-206ENST00000557659 EVI5LQ96CN4 794 aa13.86□□□□□ -0.19
CNIH1-206ENST00000557659 DDRGK1Q96HY6 314 aa13.86□□□□□ -0.19
CNIH1-206ENST00000557659 TEPSINQ96N21 525 aa13.86□□□□□ -0.19
CNIH1-206ENST00000557659 TMEM39BQ9GZU3 492 aa13.86□□□□□ -0.19
CNIH1-206ENST00000557659 GTF3C3Q9Y5Q9 886 aa13.86□□□□□ -0.19
CNIH1-206ENST00000557659 MYO5AQ9Y4I1 1855 aaKnown RBP13.86□□□□□ -0.19
CNIH1-206ENST00000557659 FOCADQ5VW36 1801 aa13.85□□□□□ -0.19
CNIH1-206ENST00000557659 MAP2K2P36507 400 aa13.85□□□□□ -0.19
CNIH1-206ENST00000557659 RGS3P49796 1198 aa13.85□□□□□ -0.19
CNIH1-206ENST00000557659 NBPF12Q5TAG4 269 aaPredicted RBP13.85□□□□□ -0.19
CNIH1-206ENST00000557659 ZSCAN29Q8IWY8 852 aaPredicted RBP13.85□□□□□ -0.19
CNIH1-206ENST00000557659 ANKRD13AQ8IZ07 590 aa13.85□□□□□ -0.19
CNIH1-206ENST00000557659 CRNKL1Q9BZJ0 848 aaKnown RBP13.85□□□□□ -0.19
CNIH1-206ENST00000557659 FAM198AQ9UFP1 575 aa13.85□□□□□ -0.19
CNIH1-206ENST00000557659 NDUFB9Q9Y6M9 179 aa13.85□□□□□ -0.19
CNIH1-206ENST00000557659 ZNF532Q9HCE3 1301 aa13.85□□□□□ -0.19
CNIH1-206ENST00000557659 CACNB3P54284 484 aa13.84□□□□□ -0.19
CNIH1-206ENST00000557659 FMR1Q06787 632 aaKnown RBP eCLIP13.84□□□□□ -0.19
CNIH1-206ENST00000557659 TCP10Q12799 353 aa13.84□□□□□ -0.19
CNIH1-206ENST00000557659 NOGQ13253 232 aa13.84□□□□□ -0.19
CNIH1-206ENST00000557659 DNAJC5GQ8N7S2 189 aa13.84□□□□□ -0.19
CNIH1-206ENST00000557659 CSRNP1Q96S65 589 aa13.84□□□□□ -0.19
CNIH1-206ENST00000557659 ZNF341Q9BYN7 854 aa13.84□□□□□ -0.19
CNIH1-206ENST00000557659 OSBPL5Q9H0X9 879 aaPredicted RBP13.84□□□□□ -0.19
CNIH1-206ENST00000557659 HERC5Q9UII4 1024 aaKnown RBP13.84□□□□□ -0.19
CNIH1-206ENST00000557659 ANGEL1Q9UNK9 670 aaKnown RBP13.84□□□□□ -0.19
CNIH1-206ENST00000557659 TCRBV5S4A2TA0A5A2 114 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 RNF113AO15541 343 aaKnown RBP13.83□□□□□ -0.2
CNIH1-206ENST00000557659 TBC1D12O60347 775 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 HLA-DOAP06340 250 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 GNAT2P19087 354 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 USP5P45974 858 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 ZNF157P51786 506 aaPredicted RBP13.83□□□□□ -0.2
CNIH1-206ENST00000557659 NFIAQ12857 509 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 PICALMQ13492 652 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 LDLRAD1Q5T700 205 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 PRAMEF18Q5VWM3 479 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 ADGRA1Q86SQ6 560 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 PLEKHM2Q8IWE5 1019 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 AMOTL1Q8IY63 956 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 SH3RF3Q8TEJ3 882 aaPredicted RBP13.83□□□□□ -0.2
CNIH1-206ENST00000557659 APPBP2Q92624 585 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 AIDAQ96BJ3 306 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 CCDC136Q96JN2 1154 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
CNIH1-206ENST00000557659 FSD1Q9BTV5 496 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 ATP8A2Q9NTI2 1148 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 SCAF8Q9UPN6 1271 aaKnown RBP13.83□□□□□ -0.2
CNIH1-206ENST00000557659 CSADQ9Y600 493 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 AK9Q5TCS8 1911 aa13.83□□□□□ -0.2
CNIH1-206ENST00000557659 WDR33Q9C0J8 1336 aaKnown RBP13.83□□□□□ -0.2
CNIH1-206ENST00000557659 HIP1O00291 1037 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 GPR37O15354 613 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 MAP3K10Q02779 954 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 TTC6Q86TZ1 520 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 GPIHBP1Q8IV16 184 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 JMYQ8N9B5 988 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 MIGA1Q8NAN2 632 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 OTUD7AQ8TE49 926 aaPredicted RBP13.82□□□□□ -0.2
CNIH1-206ENST00000557659 TGFBRAP1Q8WUH2 860 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 CAPNS2Q96L46 248 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 MKRN1Q9UHC7 482 aaKnown RBP13.82□□□□□ -0.2
CNIH1-206ENST00000557659 SSC5DA1L4H1 1573 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 FLT1P17948 1338 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 THSD7BQ9C0I4 1608 aa13.82□□□□□ -0.2
CNIH1-206ENST00000557659 USP2O75604 605 aaPredicted RBP13.81□□□□□ -0.2
CNIH1-206ENST00000557659 ZBTB48P10074 688 aaPredicted RBP13.81□□□□□ -0.2
CNIH1-206ENST00000557659 MAP3K9P80192 1104 aa13.81□□□□□ -0.2
CNIH1-206ENST00000557659 MAP2K1Q02750 393 aaPredicted RBP13.81□□□□□ -0.2
CNIH1-206ENST00000557659 TSHZ3Q63HK5 1081 aa13.81□□□□□ -0.2
CNIH1-206ENST00000557659 FOXP4Q8IVH2 680 aaPredicted RBP13.81□□□□□ -0.2
CNIH1-206ENST00000557659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.81□□□□□ -0.23e-15■■□□□ 12.3
CNIH1-206ENST00000557659 SLC10A4Q96EP9 437 aa13.81□□□□□ -0.2
CNIH1-206ENST00000557659 EDC3Q96F86 508 aaKnown RBP13.81□□□□□ -0.2
CNIH1-206ENST00000557659 TRIM34Q9BYJ4 488 aa13.81□□□□□ -0.2
CNIH1-206ENST00000557659 DDX4Q9NQI0 724 aaKnown RBP13.81□□□□□ -0.2
CNIH1-206ENST00000557659 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
CNIH1-206ENST00000557659 GINM1Q9NU53 330 aa13.81□□□□□ -0.2
CNIH1-206ENST00000557659 CDK5RAP2Q96SN8 1893 aa13.8□□□□□ -0.2
CNIH1-206ENST00000557659 TRIM6-TRIM34B2RNG4 842 aa13.8□□□□□ -0.2
CNIH1-206ENST00000557659 UBE2Q2LH0YL09 131 aa13.8□□□□□ -0.2
CNIH1-206ENST00000557659 SLC10A3P09131 477 aa13.8□□□□□ -0.2
CNIH1-206ENST00000557659 VEGFBP49765 207 aa13.8□□□□□ -0.2
CNIH1-206ENST00000557659 MFAP1P55081 439 aaKnown RBP13.8□□□□□ -0.2
CNIH1-206ENST00000557659 INHBEP58166 350 aa13.8□□□□□ -0.2
CNIH1-206ENST00000557659 HTRA3P83110 453 aa13.8□□□□□ -0.2
CNIH1-206ENST00000557659 GIMAP6Q6P9H5 292 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms