RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 MTA3Q9BTC8 594 aa17.06■□□□□ 0.32
ARHGEF40-208ENST00000557498 ZSWIM5Q9P217 1185 aa17.06■□□□□ 0.32
ARHGEF40-208ENST00000557498 PLCD1P51178 756 aa17.05■□□□□ 0.32
ARHGEF40-208ENST00000557498 TTC6Q86TZ1 520 aa17.05■□□□□ 0.32
ARHGEF40-208ENST00000557498 TDRD3Q9H7E2 651 aaKnown RBP17.05■□□□□ 0.32
ARHGEF40-208ENST00000557498 GPHNQ9NQX3 736 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF40-208ENST00000557498 ANGEL1Q9UNK9 670 aaKnown RBP17.05■□□□□ 0.32
ARHGEF40-208ENST00000557498 COL2A1P02458 1487 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF40-208ENST00000557498 SOCS7O14512 581 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 PRDM1O75626 825 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 DDIT3P35638 169 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 GMPSP49915 693 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 CACNB3P54284 484 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 EVCP57679 992 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 ZNF280AP59817 542 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 APOBRQ0VD83 1088 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 ST3GAL1Q11201 340 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 TMEM67Q5HYA8 995 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 C16orf86Q6ZW13 317 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 DYNLL2Q96FJ2 89 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 TMOD2Q9NZR1 351 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 FAM198AQ9UFP1 575 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 GJA3Q9Y6H8 435 aa17.04■□□□□ 0.32
ARHGEF40-208ENST00000557498 SIPA1L1O43166 1804 aa17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 IFIT3O14879 490 aaKnown RBP17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 ENTPD3O75355 529 aa17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 SART3Q15020 963 aaKnown RBP17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 CCDC83Q8IWF9 413 aa17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 NECAB1Q8N987 351 aa17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 IGDCC4Q8TDY8 1250 aa17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 DPF2Q92785 391 aa17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 ZNF274Q96GC6 653 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 ZBED3Q96IU2 234 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 LY9Q9HBG7 655 aa17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 ZNF287Q9HBT7 754 aa17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 MYOZ2Q9NPC6 264 aa17.03■□□□□ 0.32
ARHGEF40-208ENST00000557498 KLF18A0A0U1RQI7 1052 aa17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 SHTN1A0MZ66 631 aa17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 RANBP6O60518 1105 aaKnown RBP17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 PFKFB2O60825 505 aa17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 HLA-DOAP06340 250 aa17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 LIFRP42702 1097 aa17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 SLC44A5Q8NCS7 719 aa17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 GTF3C6Q969F1 213 aa17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 UBAC1Q9BSL1 405 aa17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 MKNK2Q9HBH9 465 aa17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 CWC22Q9HCG8 908 aaKnown RBP17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 ZNF70Q9UC06 446 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 BRPF3Q9ULD4 1205 aa17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 CIZ1Q9ULV3 898 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF40-208ENST00000557498 ERICH2A1L162 156 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 CDK8P49336 464 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 GABPAQ06546 454 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 TCP10Q12799 353 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 STK3Q13188 491 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 WTAPQ15007 396 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 SGMS1Q86VZ5 419 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 IQCA1Q86XH1 822 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 ZFPM1Q8IX07 1006 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 MICALL2Q8IY33 904 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 ZKSCAN3Q9BRR0 538 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 EHD4Q9H223 541 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 DHX36Q9H2U1 1008 aaKnown RBP17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 CHMP5Q9NZZ3 219 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 RNF181Q9P0P0 153 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 MYH8P13535 1937 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 ATRNL1Q5VV63 1379 aa17.01■□□□□ 0.31
ARHGEF40-208ENST00000557498 TNKSO95271 1327 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 CLRN2A0PK11 232 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 TSPY2A6NKD2 308 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 GOLGA8BA8MQT2 603 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 MYO1BO43795 1136 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 RASA1P20936 1047 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 PDIA3P30101 505 aaKnown RBP17■□□□□ 0.31
ARHGEF40-208ENST00000557498 SCRN1Q12765 414 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 SEC23AQ15436 765 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 FAM47AQ5JRC9 791 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 FKBP1CQ5VVH2 108 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 GPC2Q8N158 579 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 ZSCAN10Q96SZ4 725 aaPredicted RBP17■□□□□ 0.31
ARHGEF40-208ENST00000557498 SENP2Q9HC62 589 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 SWAP70Q9UH65 585 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 CNOT7Q9UIV1 285 aaKnown RBP17■□□□□ 0.31
ARHGEF40-208ENST00000557498 SERPINB13Q9UIV8 391 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 TAOK2Q9UL54 1235 aa17■□□□□ 0.31
ARHGEF40-208ENST00000557498 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
ARHGEF40-208ENST00000557498 CCDC69A6NI79 296 aa16.99■□□□□ 0.31
ARHGEF40-208ENST00000557498 WNT10BO00744 389 aa16.99■□□□□ 0.31
ARHGEF40-208ENST00000557498 GPR162Q16538 588 aa16.99■□□□□ 0.31
ARHGEF40-208ENST00000557498 C9orf131Q5VYM1 1079 aa16.99■□□□□ 0.31
ARHGEF40-208ENST00000557498 NFXL1Q6ZNB6 911 aa16.99■□□□□ 0.31
ARHGEF40-208ENST00000557498 SH3BP5LQ7L8J4 393 aa16.99■□□□□ 0.31
ARHGEF40-208ENST00000557498 ZNF444Q8N0Y2 327 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF40-208ENST00000557498 SMC3Q9UQE7 1217 aa16.99■□□□□ 0.31
ARHGEF40-208ENST00000557498 DDTLA6NHG4 134 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 TCP10L2B9ZVM9 353 aa16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 TFAP4Q01664 338 aa16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 APOA5Q6Q788 366 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms