RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 POLR3EQ9NVU0 708 aa11.9□□□□□ -0.5
SUPT16H-207ENST00000557394 CDHR2Q9BYE9 1310 aa11.9□□□□□ -0.5
SUPT16H-207ENST00000557394 NCAPD2Q15021 1401 aa11.9□□□□□ -0.5
SUPT16H-207ENST00000557394 BDNFP23560 247 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 BEND3Q5T5X7 828 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 ARHGEF25Q86VW2 580 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 TTC30BQ8N4P2 665 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 AGXT2Q9BYV1 514 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 IRF2BPLQ9H1B7 796 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 TPX2Q9ULW0 747 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 FAM169AQ9Y6X4 670 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 CCDC175P0C221 793 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 CMA1P23946 247 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 IRX2Q9BZI1 471 aaPredicted RBP11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 SIL1Q9H173 461 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 BABAM1Q9NWV8 329 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 ATXN2Q99700 1313 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 KDRP35968 1356 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 USP31Q70CQ4 1352 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 OVOS2A0A0J9YW53 1432 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 OVOS2Q6IE36 1432 aa11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 MARF1Q9Y4F3 1742 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-207ENST00000557394 COL15A1P39059 1388 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 MAP3K19Q56UN5 1328 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 WHAMMP3Q1A5X7 153 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 FBXW10Q5XX13 1052 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 PHAXQ9H814 394 aaKnown RBP11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 SLAIN2Q9P270 581 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 CLIC4Q9Y696 253 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 SPTLC2O15270 562 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 PFKFB1P16118 471 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 RBM5P52756 815 aaKnown RBP eCLIP11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 STK38Q15208 465 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 SPECC1LQ69YQ0 1117 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 AACSQ86V21 672 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 XAGE2Q96GT9 111 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 CCDC85AQ96PX6 553 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 DESI2Q9BSY9 194 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 FANCLQ9NW38 375 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 SYNPO2Q9UMS6 1093 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 ADGRG1Q9Y653 693 aa11.88□□□□□ -0.51
SUPT16H-207ENST00000557394 CEMIPQ8WUJ3 1361 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 EBAG9O00559 213 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 RHOXF2BP0C7M4 288 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 FAM200BP0CF97 657 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 GPTP24298 496 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 PIP4K2BP78356 416 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 BIRC2Q13490 618 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 IGSF22Q8N9C0 903 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 PANX2Q96RD6 677 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 RHOXF2Q9BQY4 288 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 FSD1Q9BTV5 496 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 RANBP17Q9H2T7 1088 aaKnown RBP11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 HPCAL4Q9UM19 191 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 KAT6BQ8WYB5 2073 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 MED1Q15648 1581 aaPredicted RBP11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 ALS2Q96Q42 1657 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 CTAGE15A4D2H0 777 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 KIF5CO60282 957 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 CTAGE8P0CG41 777 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 CCT5P48643 541 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 ADKP55263 362 aaKnown RBP11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 ISM2Q6H9L7 571 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 CTAGE6Q86UF2 777 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 CTAGE4Q8IX94 777 aa11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 SEC62Q99442 399 aaKnown RBP11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 GNL3LQ9NVN8 582 aaKnown RBP11.87□□□□□ -0.51
SUPT16H-207ENST00000557394 CARMIL3Q8ND23 1372 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 NHSL1Q5SYE7 1610 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 FAM237AA0A1B0GTK4 181 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 CTAGE9A4FU28 777 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 CSB-PGBD3P0DP91 1061 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 FNTAP49354 379 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 IRAK1P51617 712 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 PTPN21Q16825 1174 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 HSP90AB2PQ58FF8 381 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 TTLL5Q6EMB2 1281 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 HPSEQ9Y251 543 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 IPO7O95373 1038 aaKnown RBP11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 PARNO95453 639 aaKnown RBP11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 CYP21A2P08686 494 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 ZNF18P17022 549 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 INPP5BP32019 993 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 MTF1Q14872 753 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 KIF4BQ2VIQ3 1234 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 BRINP3Q76B58 766 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 KRT28Q7Z3Y7 464 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 PDILTQ8N807 584 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 EAF2Q96CJ1 260 aaPredicted RBP11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 CABS1Q96KC9 395 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 NAA15Q9BXJ9 866 aaKnown RBP11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 GABBR1Q9UBS5 961 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 PXDNQ92626 1479 aa11.86□□□□□ -0.51
SUPT16H-207ENST00000557394 RFX7Q2KHR2 1363 aa11.85□□□□□ -0.51
SUPT16H-207ENST00000557394 KLHL33A6NCF5 533 aa11.85□□□□□ -0.51
SUPT16H-207ENST00000557394 HMGB1P1B2RPK0 211 aaPredicted RBP11.85□□□□□ -0.51
SUPT16H-207ENST00000557394 PPP1R12AO14974 1030 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms