RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 GRK4P32298 578 aa19.47■□□□□ 0.71
TUBB3-213ENST00000557262 CAP2P40123 477 aa19.47■□□□□ 0.71
TUBB3-213ENST00000557262 FCGRTP55899 365 aa19.47■□□□□ 0.71
TUBB3-213ENST00000557262 CCDC84Q86UT8 332 aaPredicted RBP19.47■□□□□ 0.71
TUBB3-213ENST00000557262 DHX36Q9H2U1 1008 aaKnown RBP19.47■□□□□ 0.71
TUBB3-213ENST00000557262 AATFQ9NY61 560 aaKnown RBP eCLIP19.47■□□□□ 0.71
TUBB3-213ENST00000557262 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.47■□□□□ 0.71
TUBB3-213ENST00000557262 PI4KBQ9UBF8 816 aa19.47■□□□□ 0.71
TUBB3-213ENST00000557262 HERC5Q9UII4 1024 aaKnown RBP19.47■□□□□ 0.71
TUBB3-213ENST00000557262 MYPNQ86TC9 1320 aa19.47■□□□□ 0.71
TUBB3-213ENST00000557262 COL2A1P02458 1487 aaPredicted RBP19.47■□□□□ 0.71
TUBB3-213ENST00000557262 ZAP70P43403 619 aa19.46■□□□□ 0.71
TUBB3-213ENST00000557262 TBC1D2Q9BYX2 928 aa19.46■□□□□ 0.71
TUBB3-213ENST00000557262 AGTPBP1Q9UPW5 1226 aa19.46■□□□□ 0.71
TUBB3-213ENST00000557262 SPP2Q13103 211 aa19.45■□□□□ 0.7
TUBB3-213ENST00000557262 FOXP4Q8IVH2 680 aaPredicted RBP19.45■□□□□ 0.7
TUBB3-213ENST00000557262 ZNF280CQ8ND82 737 aa19.45■□□□□ 0.7
TUBB3-213ENST00000557262 SMCR8Q8TEV9 937 aaPredicted RBP19.45■□□□□ 0.7
TUBB3-213ENST00000557262 TGFBRAP1Q8WUH2 860 aa19.45■□□□□ 0.7
TUBB3-213ENST00000557262 EAF2Q96CJ1 260 aaPredicted RBP19.45■□□□□ 0.7
TUBB3-213ENST00000557262 GCC1Q96CN9 775 aa19.45■□□□□ 0.7
TUBB3-213ENST00000557262 CCDC8Q9H0W5 538 aaPredicted RBP19.45■□□□□ 0.7
TUBB3-213ENST00000557262 DBNLQ9UJU6 430 aaKnown RBP19.45■□□□□ 0.7
TUBB3-213ENST00000557262 USP17L5A8MUK1 530 aa19.44■□□□□ 0.7
TUBB3-213ENST00000557262 RRP1BQ14684 758 aaKnown RBP19.44■□□□□ 0.7
TUBB3-213ENST00000557262 MTFR1Q15390 333 aa19.44■□□□□ 0.7
TUBB3-213ENST00000557262 PROCA1Q8NCQ7 364 aaPredicted RBP19.44■□□□□ 0.7
TUBB3-213ENST00000557262 ZBED9Q6R2W3 1325 aa19.44■□□□□ 0.7
TUBB3-213ENST00000557262 DOCK1Q14185 1865 aa19.43■□□□□ 0.7
TUBB3-213ENST00000557262 PRKCZQ05513 592 aa19.43■□□□□ 0.7
TUBB3-213ENST00000557262 TREML2Q5T2D2 321 aa19.43■□□□□ 0.7
TUBB3-213ENST00000557262 CEP85Q6P2H3 762 aa19.43■□□□□ 0.7
TUBB3-213ENST00000557262 ADGRA1Q86SQ6 560 aa19.43■□□□□ 0.7
TUBB3-213ENST00000557262 PIH1D3Q9NQM4 214 aaKnown RBP19.43■□□□□ 0.7
TUBB3-213ENST00000557262 BIN2Q9UBW5 565 aaPredicted RBP19.43■□□□□ 0.7
TUBB3-213ENST00000557262 PNMA3Q9UL41 463 aa19.43■□□□□ 0.7
TUBB3-213ENST00000557262 UBXN2AP68543 259 aa19.42■□□□□ 0.7
TUBB3-213ENST00000557262 MAPKAPK5Q8IW41 473 aa19.42■□□□□ 0.7
TUBB3-213ENST00000557262 NKX2-3Q8TAU0 364 aa19.42■□□□□ 0.7
TUBB3-213ENST00000557262 PANK1Q8TE04 598 aa19.42■□□□□ 0.7
TUBB3-213ENST00000557262 AS3MTQ9HBK9 375 aa19.42■□□□□ 0.7
TUBB3-213ENST00000557262 TLR7Q9NYK1 1049 aaKnown RBP19.42■□□□□ 0.7
TUBB3-213ENST00000557262 GABRQQ9UN88 632 aa19.42■□□□□ 0.7
TUBB3-213ENST00000557262 PHIPQ8WWQ0 1821 aa19.41■□□□□ 0.7
TUBB3-213ENST00000557262 MS4A1P11836 297 aa19.41■□□□□ 0.7
TUBB3-213ENST00000557262 CYP7A1P22680 504 aa19.41■□□□□ 0.7
TUBB3-213ENST00000557262 PABPC4Q13310 644 aaKnown RBP eCLIP19.41■□□□□ 0.7
TUBB3-213ENST00000557262 SH3D19Q5HYK7 790 aa19.41■□□□□ 0.7
TUBB3-213ENST00000557262 METTL16Q86W50 562 aaKnown RBP19.41■□□□□ 0.7
TUBB3-213ENST00000557262 ERC1Q8IUD2 1116 aa19.41■□□□□ 0.7
TUBB3-213ENST00000557262 SLAIN1Q8ND83 568 aa19.41■□□□□ 0.7
TUBB3-213ENST00000557262 PALD1Q9ULE6 856 aa19.41■□□□□ 0.7
TUBB3-213ENST00000557262 TNPO2O14787 897 aaKnown RBP19.4■□□□□ 0.7
TUBB3-213ENST00000557262 CCL5P13501 91 aa19.4■□□□□ 0.7
TUBB3-213ENST00000557262 FLT3LGP49771 235 aa19.4■□□□□ 0.7
TUBB3-213ENST00000557262 HMGCS2P54868 508 aa19.4■□□□□ 0.7
TUBB3-213ENST00000557262 ANKRD13CQ8N6S4 541 aa19.4■□□□□ 0.7
TUBB3-213ENST00000557262 WDR18Q9BV38 432 aa19.4■□□□□ 0.7
TUBB3-213ENST00000557262 FLT1P17948 1338 aa19.4■□□□□ 0.7
TUBB3-213ENST00000557262 PTPRFP10586 1907 aa19.39■□□□□ 0.7
TUBB3-213ENST00000557262 ADCY3O60266 1144 aa19.39■□□□□ 0.69
TUBB3-213ENST00000557262 IDH1O75874 414 aaKnown RBP19.39■□□□□ 0.69
TUBB3-213ENST00000557262 GJB1P08034 283 aa19.39■□□□□ 0.69
TUBB3-213ENST00000557262 ASNSP08243 561 aa19.39■□□□□ 0.69
TUBB3-213ENST00000557262 GCLCP48506 637 aaPredicted RBP19.39■□□□□ 0.69
TUBB3-213ENST00000557262 DYNLL1P63167 89 aaKnown RBP19.39■□□□□ 0.69
TUBB3-213ENST00000557262 HSP90AB4PQ58FF6 505 aa19.39■□□□□ 0.69
TUBB3-213ENST00000557262 CERS3Q8IU89 383 aa19.39■□□□□ 0.69
TUBB3-213ENST00000557262 CRACR2BQ8N4Y2 399 aaPredicted RBP19.39■□□□□ 0.69
TUBB3-213ENST00000557262 TRIM34Q9BYJ4 488 aa19.39■□□□□ 0.69
TUBB3-213ENST00000557262 RNF208Q9H0X6 261 aa19.39■□□□□ 0.69
TUBB3-213ENST00000557262 GINM1Q9NU53 330 aa19.39■□□□□ 0.69
TUBB3-213ENST00000557262 EXOC6BQ9Y2D4 811 aa19.39■□□□□ 0.69
TUBB3-213ENST00000557262 GJA8P48165 433 aa19.38■□□□□ 0.69
TUBB3-213ENST00000557262 IRF5Q13568 498 aa19.38■□□□□ 0.69
TUBB3-213ENST00000557262 FAM110CQ1W6H9 321 aa19.38■□□□□ 0.69
TUBB3-213ENST00000557262 AACSQ86V21 672 aa19.38■□□□□ 0.69
TUBB3-213ENST00000557262 PXYLP1Q8TE99 480 aa19.38■□□□□ 0.69
TUBB3-213ENST00000557262 COA7Q96BR5 231 aa19.38■□□□□ 0.69
TUBB3-213ENST00000557262 DNAJC18Q9H819 358 aa19.38■□□□□ 0.69
TUBB3-213ENST00000557262 C19orf81C9J6K1 198 aa19.37■□□□□ 0.69
TUBB3-213ENST00000557262 HLA-DOAP06340 250 aa19.37■□□□□ 0.69
TUBB3-213ENST00000557262 BACE1P56817 501 aa19.37■□□□□ 0.69
TUBB3-213ENST00000557262 JAG1P78504 1218 aa19.37■□□□□ 0.69
TUBB3-213ENST00000557262 MAP3K12Q12852 859 aa19.37■□□□□ 0.69
TUBB3-213ENST00000557262 TMED8Q6PL24 325 aaPredicted RBP19.37■□□□□ 0.69
TUBB3-213ENST00000557262 MAGEB6Q8N7X4 407 aa19.37■□□□□ 0.69
TUBB3-213ENST00000557262 SHISA4Q96DD7 197 aa19.37■□□□□ 0.69
TUBB3-213ENST00000557262 ASCC2Q9H1I8 757 aaPredicted RBP19.37■□□□□ 0.69
TUBB3-213ENST00000557262 SAP30BPQ9UHR5 308 aaKnown RBP19.37■□□□□ 0.69
TUBB3-213ENST00000557262 MGAMO43451 1857 aa19.37■□□□□ 0.69
TUBB3-213ENST00000557262 HABP4Q5JVS0 413 aaKnown RBP19.36■□□□□ 0.69
TUBB3-213ENST00000557262 RPAP2Q8IXW5 612 aaPredicted RBP19.36■□□□□ 0.69
TUBB3-213ENST00000557262 MIGA1Q8NAN2 632 aa19.36■□□□□ 0.69
TUBB3-213ENST00000557262 RHPN1Q8TCX5 695 aa19.36■□□□□ 0.69
TUBB3-213ENST00000557262 ANTXR1Q9H6X2 564 aa19.36■□□□□ 0.69
TUBB3-213ENST00000557262 TMOD4Q9NZQ9 345 aa19.36■□□□□ 0.69
TUBB3-213ENST00000557262 PCDH10Q9P2E7 1040 aa19.36■□□□□ 0.69
TUBB3-213ENST00000557262 NDUFB9Q9Y6M9 179 aa19.36■□□□□ 0.69
TUBB3-213ENST00000557262 ELNP15502 786 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms