RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 ATP1A2P50993 1020 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 VAV2P52735 878 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 AMPD3Q01432 767 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 KCNJ12Q14500 433 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 NAA25Q14CX7 972 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 SMYD4Q8IYR2 804 aaPredicted RBP5.61□□□□□ -1.51
SYNE2-223ENST00000557005 DSCC1Q9BVC3 393 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 BMP2KQ9NSY1 1161 aaPredicted RBP5.61□□□□□ -1.51
SYNE2-223ENST00000557005 AKR1B10O60218 316 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 RAD51AP2Q09MP3 1159 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 WHAMMP3Q1A5X7 153 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 DZIP1Q86YF9 867 aaKnown RBP5.61□□□□□ -1.51
SYNE2-223ENST00000557005 GSPT2Q8IYD1 628 aaKnown RBP5.61□□□□□ -1.51
SYNE2-223ENST00000557005 SLC35F6Q8N357 371 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 PYM1Q9BRP8 204 aaKnown RBP5.61□□□□□ -1.51
SYNE2-223ENST00000557005 NRKQ7Z2Y5 1582 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 AATKQ6ZMQ8 1374 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 TSPY2A6NKD2 308 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 GPAA1O43292 621 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 RNF40O75150 1001 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 POLA2Q14181 598 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 LONRF2Q1L5Z9 754 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 TYW1BQ6NUM6 668 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 SND1Q7KZF4 910 aaKnown RBP eCLIP5.61□□□□□ -1.51
SYNE2-223ENST00000557005 POTEDQ86YR6 584 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 FAM71BQ8TC56 605 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 PRM3Q9NNZ6 103 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 ABCB6Q9NP58 842 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 LUC7L2Q9Y383 392 aaKnown RBP5.61□□□□□ -1.51
SYNE2-223ENST00000557005 ADGRB2O60241 1585 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 GOLGA8KD6RF30 607 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 BUB1O43683 1085 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 KIF4AO95239 1232 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 CLNS1AP54105 237 aaKnown RBP5.61□□□□□ -1.51
SYNE2-223ENST00000557005 TRIM14Q14142 442 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 MYSM1Q5VVJ2 828 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 C8orf74Q6P047 294 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 ARMCX5Q6P1M9 558 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 KLHL7Q8IXQ5 586 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 CCDC42Q96M95 316 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 UIMC1Q96RL1 719 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 IL25Q9H293 177 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 INCENPQ9NQS7 918 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 TCP11L1Q9NUJ3 509 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 MKRN1Q9UHC7 482 aaKnown RBP5.61□□□□□ -1.51
SYNE2-223ENST00000557005 JAG2Q9Y219 1238 aa5.61□□□□□ -1.51
SYNE2-223ENST00000557005 TAF5LO75529 589 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 PRR29P0C7W0 189 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 CASP14P31944 242 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 PTPROQ16827 1216 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 NBPF6Q5VWK0 638 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 VSTM4Q8IW00 320 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 NBPF4Q96M43 638 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 HAUS7Q99871 368 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 PHF23Q9BUL5 403 aaPredicted RBP5.6□□□□□ -1.51
SYNE2-223ENST00000557005 CAPS2Q9BXY5 557 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 RTEL1Q9NZ71 1219 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 WWC3Q9ULE0 1092 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 INO80Q9ULG1 1556 aaPredicted RBP5.6□□□□□ -1.51
SYNE2-223ENST00000557005 ANKRD65E5RJM6 399 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 CCNT1O60563 726 aaKnown RBP5.6□□□□□ -1.51
SYNE2-223ENST00000557005 UQCRFS1P1P0C7P4 283 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 HSPD1P10809 573 aaKnown RBP5.6□□□□□ -1.51
SYNE2-223ENST00000557005 ATP5JP18859 108 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 CCT5P48643 541 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 TUBB2AQ13885 445 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 CFAP58Q5T655 872 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 TUBB2BQ9BVA1 445 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 ITSN1Q15811 1721 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 NEBLO76041 1014 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 TSPY3P0CV98 308 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 TSPY8P0CW00 308 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 ATP1A3P13637 1013 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 ST5P78524 1137 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 GCKRQ14397 625 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 TCERG1LQ5VWI1 586 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 SRGAP1Q7Z6B7 1085 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 CDC5LQ99459 802 aaKnown RBP5.6□□□□□ -1.51
SYNE2-223ENST00000557005 CSRNP2Q9H175 543 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 VPS54Q9P1Q0 977 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 METP08581 1390 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 BICDL2A1A5D9 508 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 NDUFAB1O14561 156 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 PSMA7O14818 248 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 DEXIO95424 95 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 UBA7P41226 1012 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 B4GALNT4Q76KP1 1039 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 ZNF444Q8N0Y2 327 aaPredicted RBP5.6□□□□□ -1.51
SYNE2-223ENST00000557005 KBTBD3Q8NAB2 608 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 MLKLQ8NB16 471 aa5.6□□□□□ -1.51
SYNE2-223ENST00000557005 ZNF274Q96GC6 653 aaPredicted RBP5.6□□□□□ -1.51
SYNE2-223ENST00000557005 CMA1P23946 247 aa5.59□□□□□ -1.51
SYNE2-223ENST00000557005 CCZ1BP86790 482 aa5.59□□□□□ -1.51
SYNE2-223ENST00000557005 CCZ1P86791 482 aaPredicted RBP5.59□□□□□ -1.51
SYNE2-223ENST00000557005 LRRC24Q50LG9 513 aa5.59□□□□□ -1.51
SYNE2-223ENST00000557005 DIS3L2Q8IYB7 885 aaKnown RBP5.59□□□□□ -1.51
SYNE2-223ENST00000557005 IP6K1Q92551 441 aa5.59□□□□□ -1.51
SYNE2-223ENST00000557005 SYMPKQ92797 1274 aaKnown RBP5.59□□□□□ -1.51
SYNE2-223ENST00000557005 SELENOOQ9BVL4 669 aa5.59□□□□□ -1.51
SYNE2-223ENST00000557005 NSRP1Q9H0G5 558 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms