RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.86□□□□□ -0.83
VTI1B-206ENST00000556461 PAG1Q9NWQ8 432 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 PALD1Q9ULE6 856 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 KCNH4Q9UQ05 1017 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 SIPA1L1O43166 1804 aa9.86□□□□□ -0.83
VTI1B-206ENST00000556461 CTNND1O60716 968 aaKnown RBP9.85□□□□□ -0.83
VTI1B-206ENST00000556461 FKTNO75072 461 aa9.85□□□□□ -0.83
VTI1B-206ENST00000556461 CETPP11597 493 aa9.85□□□□□ -0.83
VTI1B-206ENST00000556461 PLCG2P16885 1265 aa9.85□□□□□ -0.83
VTI1B-206ENST00000556461 TTF1Q15361 905 aaPredicted RBP9.85□□□□□ -0.83
VTI1B-206ENST00000556461 OTUD7BQ6GQQ9 843 aa9.85□□□□□ -0.83
VTI1B-206ENST00000556461 METTL16Q86W50 562 aaKnown RBP9.85□□□□□ -0.83
VTI1B-206ENST00000556461 AFG3L2Q9Y4W6 797 aa9.85□□□□□ -0.83
VTI1B-206ENST00000556461 ZHX2Q9Y6X8 837 aa9.85□□□□□ -0.83
VTI1B-206ENST00000556461 CENPFP49454 3210 aa9.84□□□□□ -0.83
VTI1B-206ENST00000556461 MAGEB6P1A0A0J9YX57 407 aa9.84□□□□□ -0.83
VTI1B-206ENST00000556461 USP5P45974 858 aa9.84□□□□□ -0.83
VTI1B-206ENST00000556461 TAF1CQ15572 869 aaPredicted RBP9.84□□□□□ -0.83
VTI1B-206ENST00000556461 GPAT2Q6NUI2 795 aa9.84□□□□□ -0.83
VTI1B-206ENST00000556461 LCORLQ8N3X6 602 aa9.84□□□□□ -0.83
VTI1B-206ENST00000556461 EXOC6Q8TAG9 804 aa9.84□□□□□ -0.83
VTI1B-206ENST00000556461 CD99L2Q8TCZ2 262 aa9.84□□□□□ -0.83
VTI1B-206ENST00000556461 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
VTI1B-206ENST00000556461 ECHDC1Q9NTX5 307 aa9.84□□□□□ -0.83
VTI1B-206ENST00000556461 PI4KBQ9UBF8 816 aa9.84□□□□□ -0.83
VTI1B-206ENST00000556461 CDK5RAP2Q96SN8 1893 aa9.84□□□□□ -0.83
VTI1B-206ENST00000556461 A0A0G2JLL6 359 aaPredicted RBP9.83□□□□□ -0.84
VTI1B-206ENST00000556461 TRIM75PA6NK02 468 aa9.83□□□□□ -0.84
VTI1B-206ENST00000556461 CCDC85CA6NKD9 419 aa9.83□□□□□ -0.84
VTI1B-206ENST00000556461 PDHXO00330 501 aa9.83□□□□□ -0.84
VTI1B-206ENST00000556461 CXCL11O14625 94 aa9.83□□□□□ -0.84
VTI1B-206ENST00000556461 PRKAB2O43741 272 aa9.83□□□□□ -0.84
VTI1B-206ENST00000556461 ADD2P35612 726 aa9.83□□□□□ -0.84
VTI1B-206ENST00000556461 CAP2P40123 477 aa9.83□□□□□ -0.84
VTI1B-206ENST00000556461 PRRT2Q7Z6L0 340 aaPredicted RBP9.83□□□□□ -0.84
VTI1B-206ENST00000556461 SDR42E1Q8WUS8 393 aa9.83□□□□□ -0.84
VTI1B-206ENST00000556461 DHX36Q9H2U1 1008 aaKnown RBP9.83□□□□□ -0.84
VTI1B-206ENST00000556461 ARMT1Q9H993 441 aa9.83□□□□□ -0.84
VTI1B-206ENST00000556461 ZFYVE28Q9HCC9 887 aa9.83□□□□□ -0.84
VTI1B-206ENST00000556461 HERC5Q9UII4 1024 aaKnown RBP9.83□□□□□ -0.84
VTI1B-206ENST00000556461 ADGRA2Q96PE1 1338 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 FOCADQ5VW36 1801 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 SMIM22K7EJ46 135 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 MBD4O95243 580 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 GDF11O95390 407 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 CYP2C8P10632 490 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 CYP2D6P10635 497 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 PLCD1P51178 756 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 OTOP1Q7RTM1 612 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 ANKRD23Q86SG2 305 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 FOXP4Q8IVH2 680 aaPredicted RBP9.82□□□□□ -0.84
VTI1B-206ENST00000556461 PI4K2BQ8TCG2 481 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 ARHGAP39Q9C0H5 1083 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 CPA4Q9UI42 421 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 TRIM17Q9Y577 477 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 SUPT16HQ9Y5B9 1047 aaKnown RBP9.82□□□□□ -0.84
VTI1B-206ENST00000556461 DOCK1Q14185 1865 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 PHIPQ8WWQ0 1821 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 SALL3Q9BXA9 1300 aa9.82□□□□□ -0.84
VTI1B-206ENST00000556461 TLR2O60603 784 aa9.81□□□□□ -0.84
VTI1B-206ENST00000556461 ECM2O94769 699 aaPredicted RBP9.81□□□□□ -0.84
VTI1B-206ENST00000556461 CTGFP29279 349 aa9.81□□□□□ -0.84
VTI1B-206ENST00000556461 SP3Q02447 781 aa9.81□□□□□ -0.84
VTI1B-206ENST00000556461 SPP2Q13103 211 aa9.81□□□□□ -0.84
VTI1B-206ENST00000556461 HDAC1Q13547 482 aaPredicted RBP9.81□□□□□ -0.84
VTI1B-206ENST00000556461 UBE3CQ15386 1083 aa9.81□□□□□ -0.84
VTI1B-206ENST00000556461 TREML2Q5T2D2 321 aa9.81□□□□□ -0.84
VTI1B-206ENST00000556461 ANKRD45Q5TZF3 282 aa9.81□□□□□ -0.84
VTI1B-206ENST00000556461 TMED8Q6PL24 325 aaPredicted RBP9.81□□□□□ -0.84
VTI1B-206ENST00000556461 GADL1Q6ZQY3 521 aa9.81□□□□□ -0.84
VTI1B-206ENST00000556461 CRACR2BQ8N4Y2 399 aaPredicted RBP9.81□□□□□ -0.84
VTI1B-206ENST00000556461 CRNKL1Q9BZJ0 848 aaKnown RBP9.81□□□□□ -0.84
VTI1B-206ENST00000556461 PUS7LQ9H0K6 701 aaKnown RBP9.81□□□□□ -0.84
VTI1B-206ENST00000556461 ZCCHC17Q9NP64 241 aaKnown RBP9.81□□□□□ -0.84
VTI1B-206ENST00000556461 DCP1AQ9NPI6 582 aaPredicted RBP9.81□□□□□ -0.84
VTI1B-206ENST00000556461 HPS5Q9UPZ3 1129 aa9.81□□□□□ -0.84
VTI1B-206ENST00000556461 BRCA2P51587 3418 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 DDX60LQ5H9U9 1706 aaKnown RBP9.8□□□□□ -0.84
VTI1B-206ENST00000556461 CYP2D7A0A087X1C5 515 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 USP17L5A8MUK1 530 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 IGHDP01880 384 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 HLA-DOAP06340 250 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 SHMT1P34896 483 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 HMGCS2P54868 508 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 IRX6P78412 446 aaPredicted RBP9.8□□□□□ -0.84
VTI1B-206ENST00000556461 TATDN1Q6P1N9 297 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 FBXO46Q6PJ61 603 aaPredicted RBP9.8□□□□□ -0.84
VTI1B-206ENST00000556461 C17orf99Q6UX52 265 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 CERS3Q8IU89 383 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 KBTBD3Q8NAB2 608 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 ZNF280CQ8ND82 737 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 ERO1AQ96HE7 468 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.8□□□□□ -0.84
VTI1B-206ENST00000556461 EHD4Q9H223 541 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 MCM9Q9NXL9 1143 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 SERPINB13Q9UIV8 391 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 ZBTB21Q9ULJ3 1066 aa9.8□□□□□ -0.84
VTI1B-206ENST00000556461 ZSWIM8A7E2V4 1837 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 GH2P01242 217 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 POLR3DP05423 398 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms