RNA–Protein interactions for RNA: ENST00000556080.1

AL135838.1-201, humanhuman

TSL 3 BASIC

Gene AL135838.1, Length 235 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL135838.1-201ENST00000556080 WDR43Q15061 677 aaKnown RBP eCLIP7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 TMEM31Q5JXX7 168 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 MFSD14CQ5VZR4 134 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 CDC42EP5Q6NZY7 148 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 FBXO33Q7Z6M2 555 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 ALYREFQ86V81 257 aaKnown RBP7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 C8orf58Q8NAV2 365 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 DNAAF4Q8WXU2 420 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 LPAR1Q92633 364 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 TIFAQ96CG3 184 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 LRFN3Q9BTN0 628 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 FAM198AQ9UFP1 575 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 DDX20Q9UHI6 824 aaKnown RBP7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 DAGLAQ9Y4D2 1042 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 MROH5Q6ZUA9 1318 aa7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 MYBBP1AQ9BQG0 1328 aaKnown RBP7.98□□□□□ -1.13
AL135838.1-201ENST00000556080 ATRNL1Q5VV63 1379 aa7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 HMGCS2P54868 508 aa7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 FKBP5Q13451 457 aaPredicted RBP7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 CCL14Q16627 93 aa7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 AAK1Q2M2I8 961 aa7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 POTEEQ6S8J3 1075 aa7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 GPRC5AQ8NFJ5 357 aa7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 WDR66Q8TBY9 1149 aa7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 CCER1Q8TC90 406 aaPredicted RBP7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 TBC1D2Q9BYX2 928 aa7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 PDLIM7Q9NR12 457 aa7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 USP40Q9NVE5 1235 aa7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 MUC6Q6W4X9 2439 aa7.97□□□□□ -1.13
AL135838.1-201ENST00000556080 ENTPD3O75355 529 aa7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 GLRX3O76003 335 aaKnown RBP7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 RGS3P49796 1198 aa7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 FLIIQ13045 1269 aa7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 SPP2Q13103 211 aa7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 DIXDC1Q155Q3 683 aa7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 CCDC85BQ15834 202 aaPredicted RBP7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 TRIM60Q495X7 471 aa7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 SLC39A5Q6ZMH5 540 aa7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 CCDC84Q86UT8 332 aaPredicted RBP7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 ARRDC4Q8NCT1 418 aa7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 ZNF280CQ8ND82 737 aa7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 NECAB3Q96P71 396 aaPredicted RBP7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 P2RX7Q99572 595 aaKnown RBP7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 CACNA1AO00555 2505 aa7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 UTYO14607 1347 aa7.96□□□□□ -1.14
AL135838.1-201ENST00000556080 RLFQ13129 1914 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 ATAD5Q96QE3 1844 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 MYCNP04198 464 aaPredicted RBP7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 SLC4A2P04920 1241 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 RAG1P15918 1043 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 IGFBP4P22692 258 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 FPGSQ05932 587 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 METTL24Q5JXM2 366 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 CCDC129Q6ZRS4 1044 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 G2E3Q7L622 706 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 GPR142Q7Z601 462 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 PLEKHH3Q7Z736 793 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 ZFPM1Q8IX07 1006 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 PRDM12Q9H4Q4 367 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 AS3MTQ9HBK9 375 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 TMOD4Q9NZQ9 345 aa7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 CXXC1Q9P0U4 656 aaPredicted RBP7.95□□□□□ -1.14
AL135838.1-201ENST00000556080 LDHBP07195 334 aaKnown RBP7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 IFIT1P09914 478 aaKnown RBP7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 MRE11P49959 708 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 HERVK_113P62684 666 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 ERVK-9P63128 1117 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 ERVK-24P63145 666 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 MAP3K10Q02779 954 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 MAP2K5Q13163 448 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 SNX17Q15036 470 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 NCBP3Q53F19 620 aaKnown RBP7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 MORN1Q5T089 497 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 GJC2Q5T442 439 aaPredicted RBP7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 CCDC174Q6PII3 467 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 TSPYL6Q8N831 410 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 GTF3C2Q8WUA4 911 aaPredicted RBP7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 USP6NLQ92738 828 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 PAGR1Q9BTK6 254 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 IDI2Q9BXS1 227 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 PUS3Q9BZE2 481 aaKnown RBP7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 OSBPL5Q9H0X9 879 aaPredicted RBP7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 TACC3Q9Y6A5 838 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 KIF16BQ96L93 1317 aa7.94□□□□□ -1.14
AL135838.1-201ENST00000556080 TRIM43BA6NCK2 446 aa7.93□□□□□ -1.14
AL135838.1-201ENST00000556080 USP17L5A8MUK1 530 aa7.93□□□□□ -1.14
AL135838.1-201ENST00000556080 GRM8O00222 908 aa7.93□□□□□ -1.14
AL135838.1-201ENST00000556080 PDE8BO95263 885 aa7.93□□□□□ -1.14
AL135838.1-201ENST00000556080 CLTBP09497 229 aa7.93□□□□□ -1.14
AL135838.1-201ENST00000556080 PRDX5P30044 214 aa7.93□□□□□ -1.14
AL135838.1-201ENST00000556080 CCNA1P78396 465 aa7.93□□□□□ -1.14
AL135838.1-201ENST00000556080 ATP2B2Q01814 1243 aa7.93□□□□□ -1.14
AL135838.1-201ENST00000556080 PICALMQ13492 652 aa7.93□□□□□ -1.14
AL135838.1-201ENST00000556080 SKIV2LQ15477 1246 aaKnown RBP7.93□□□□□ -1.14
AL135838.1-201ENST00000556080 SH3D19Q5HYK7 790 aa7.93□□□□□ -1.14
AL135838.1-201ENST00000556080 EPHA10Q5JZY3 1008 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms