RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 HNRNPUQ00839 825 aaKnown RBP eCLIP8.29□□□□□ -1.08
PSEN1-216ENST00000556066 CCL15Q16663 113 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 FBXO46Q6PJ61 603 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-216ENST00000556066 MIGA2Q7L4E1 593 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 FAM83AQ86UY5 434 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.29□□□□□ -1.08
PSEN1-216ENST00000556066 ZKSCAN4Q969J2 545 aaPredicted RBP8.29□□□□□ -1.08
PSEN1-216ENST00000556066 HOOK2Q96ED9 719 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 WRNIP1Q96S55 665 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 PTPN18Q99952 460 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 CFHR5Q9BXR6 569 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 COPRSQ9NQ92 184 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 DENND2AQ9ULE3 1009 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 TNNQ9UQP3 1299 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 DAGLAQ9Y4D2 1042 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 TRIM17Q9Y577 477 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 MKI67P46013 3256 aaKnown RBP8.29□□□□□ -1.08
PSEN1-216ENST00000556066 DOCK2Q92608 1830 aa8.29□□□□□ -1.08
PSEN1-216ENST00000556066 GNAI2P04899 355 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 GTF2A2P52657 109 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 TFCP2Q12800 502 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 TAF1CQ15572 869 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-216ENST00000556066 HABP4Q5JVS0 413 aaKnown RBP8.28□□□□□ -1.08
PSEN1-216ENST00000556066 GORABQ5T7V8 394 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 FKBP1CQ5VVH2 108 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 DCAF15Q66K64 600 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 CCDC102BQ68D86 513 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 CDC42EP5Q6NZY7 148 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 ATF7IPQ6VMQ6 1270 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 CD99L2Q8TCZ2 262 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 NEUROD6Q96NK8 337 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 USP40Q9NVE5 1235 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 ABCF2Q9UG63 623 aa8.28□□□□□ -1.08
PSEN1-216ENST00000556066 A0A1B0GUL7 405 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 SPDYE5A6NIY4 337 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 WDHD1O75717 1129 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-216ENST00000556066 SP3Q02447 781 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 NFIAQ12857 509 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 RASGRF1Q13972 1273 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 OTOP1Q7RTM1 612 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 ERO1BQ86YB8 467 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 DZIP1Q86YF9 867 aaKnown RBP8.27□□□□□ -1.09
PSEN1-216ENST00000556066 ZGPATQ8N5A5 531 aaKnown RBP8.27□□□□□ -1.09
PSEN1-216ENST00000556066 FAM151AQ8WW52 585 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 BRI3BPQ8WY22 251 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 XAGE2Q96GT9 111 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 ERO1AQ96HE7 468 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 ZNF341Q9BYN7 854 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 ZFYVE28Q9HCC9 887 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 AKAP2Q9Y2D5 859 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 SNCAIPQ9Y6H5 919 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 A0A0C4DFX4 3053 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 SALL1Q9NSC2 1324 aa8.27□□□□□ -1.09
PSEN1-216ENST00000556066 RPAP1Q9BWH6 1393 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-216ENST00000556066 PNMA6EA0A0J9YXQ4 647 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 IRF6O14896 467 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 EIF5BO60841 1220 aaKnown RBP8.26□□□□□ -1.09
PSEN1-216ENST00000556066 CETPP11597 493 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 INPP5BP32019 993 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 G3BP1Q13283 466 aaKnown RBP eCLIP8.26□□□□□ -1.09
PSEN1-216ENST00000556066 SNAPC2Q13487 334 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 MTX1Q13505 466 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 MVPQ14764 893 aaKnown RBP8.26□□□□□ -1.09
PSEN1-216ENST00000556066 ZKSCAN2Q63HK3 967 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 ZSCAN29Q8IWY8 852 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-216ENST00000556066 ZFPM1Q8IX07 1006 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 FAM43AQ8N2R8 423 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 TMEM57Q8N5G2 664 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 EFCC1Q9HA90 598 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 VPS9D1Q9Y2B5 631 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 ZSWIM8A7E2V4 1837 aa8.26□□□□□ -1.09
PSEN1-216ENST00000556066 MYO5AQ9Y4I1 1855 aaKnown RBP8.26□□□□□ -1.09
PSEN1-216ENST00000556066 RANBP2P49792 3224 aaKnown RBP8.25□□□□□ -1.09
PSEN1-216ENST00000556066 GRXCR2A6NFK2 248 aa8.25□□□□□ -1.09
PSEN1-216ENST00000556066 RGS3P49796 1198 aa8.25□□□□□ -1.09
PSEN1-216ENST00000556066 PPIL2Q13356 520 aa8.25□□□□□ -1.09
PSEN1-216ENST00000556066 OS9Q13438 667 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-216ENST00000556066 PICALMQ13492 652 aa8.25□□□□□ -1.09
PSEN1-216ENST00000556066 SPTY2D1Q68D10 685 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-216ENST00000556066 SLF2Q8IX21 1173 aa8.25□□□□□ -1.09
PSEN1-216ENST00000556066 FTSJ3Q8IY81 847 aaKnown RBP8.25□□□□□ -1.09
PSEN1-216ENST00000556066 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-216ENST00000556066 FAM198AQ9UFP1 575 aa8.25□□□□□ -1.09
PSEN1-216ENST00000556066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-216ENST00000556066 SZT2Q5T011 3432 aa8.25□□□□□ -1.09
PSEN1-216ENST00000556066 BTBD19C9JJ37 291 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 OSBPP22059 807 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 BTDP43251 543 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 MECOMQ03112 1051 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 PPATQ06203 517 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 ARHGEF6Q15052 776 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 PI16Q6UXB8 463 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 TBC1D9Q6ZT07 1266 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 ITPRIPQ8IWB1 547 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 SPATA5Q8NB90 893 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 WNT2BQ93097 391 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 GCC1Q96CN9 775 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 SLC4A5Q9BY07 1137 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 C1orf115Q9H7X2 142 aa8.24□□□□□ -1.09
PSEN1-216ENST00000556066 RAI14Q9P0K7 980 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms