RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 LRP10Q7Z4F1 713 aa8.31□□□□□ -1.08
SLIRP-204ENST00000555890 NECAB3Q96P71 396 aaPredicted RBP8.31□□□□□ -1.08
SLIRP-204ENST00000555890 BCL11AQ9H165 835 aa8.31□□□□□ -1.08
SLIRP-204ENST00000555890 R3HDMLQ9H3Y0 253 aa8.31□□□□□ -1.08
SLIRP-204ENST00000555890 OSBPL3Q9H4L5 887 aa8.31□□□□□ -1.08
SLIRP-204ENST00000555890 ADARB2Q9NS39 739 aaKnown RBP8.31□□□□□ -1.08
SLIRP-204ENST00000555890 PCDHGC3Q9UN70 934 aa8.31□□□□□ -1.08
SLIRP-204ENST00000555890 LHX6Q9UPM6 363 aa8.31□□□□□ -1.08
SLIRP-204ENST00000555890 COL15A1P39059 1388 aa8.31□□□□□ -1.08
SLIRP-204ENST00000555890 ATG7O95352 703 aa8.3□□□□□ -1.08
SLIRP-204ENST00000555890 PDE6BP35913 854 aa8.3□□□□□ -1.08
SLIRP-204ENST00000555890 PIP4K2AP48426 406 aaPredicted RBP8.3□□□□□ -1.08
SLIRP-204ENST00000555890 EIF5P55010 431 aaKnown RBP8.3□□□□□ -1.08
SLIRP-204ENST00000555890 FKBP4Q02790 459 aaKnown RBP eCLIP8.3□□□□□ -1.08
SLIRP-204ENST00000555890 KIF6Q6ZMV9 814 aa8.3□□□□□ -1.08
SLIRP-204ENST00000555890 CNKSR1Q969H4 720 aa8.3□□□□□ -1.08
SLIRP-204ENST00000555890 KIF1BPQ96EK5 621 aa8.3□□□□□ -1.08
SLIRP-204ENST00000555890 ZNF318Q5VUA4 2279 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 MAGEA10P43363 369 aaPredicted RBP8.29□□□□□ -1.08
SLIRP-204ENST00000555890 PDE1AP54750 535 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 G3BP1Q13283 466 aaKnown RBP eCLIP8.29□□□□□ -1.08
SLIRP-204ENST00000555890 BECN1Q14457 450 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 RASAL3Q86YV0 1011 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 RHPN1Q8TCX5 695 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 LRRN4Q8WUT4 740 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 TSC1Q92574 1164 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 SUCLG2Q96I99 432 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 C22orf23Q9BZE7 217 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 VRTNQ9H8Y1 702 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 CWC25Q9NXE8 425 aaPredicted RBP8.29□□□□□ -1.08
SLIRP-204ENST00000555890 TFIP11Q9UBB9 837 aaKnown RBP8.29□□□□□ -1.08
SLIRP-204ENST00000555890 AK9Q5TCS8 1911 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 AOX1Q06278 1338 aa8.29□□□□□ -1.08
SLIRP-204ENST00000555890 A0A087WZG4 1122 aa8.28□□□□□ -1.08
SLIRP-204ENST00000555890 KLRG2A4D1S0 409 aaPredicted RBP8.28□□□□□ -1.08
SLIRP-204ENST00000555890 MX1P20591 662 aa8.28□□□□□ -1.08
SLIRP-204ENST00000555890 ID4P47928 161 aa8.28□□□□□ -1.08
SLIRP-204ENST00000555890 EIF6P56537 245 aaKnown RBP8.28□□□□□ -1.08
SLIRP-204ENST00000555890 HSP90AB3PQ58FF7 597 aa8.28□□□□□ -1.08
SLIRP-204ENST00000555890 TTLL7Q6ZT98 887 aa8.28□□□□□ -1.08
SLIRP-204ENST00000555890 SND1Q7KZF4 910 aaKnown RBP eCLIP8.28□□□□□ -1.081e-12■■□□□ 11.5
SLIRP-204ENST00000555890 USP48Q86UV5 1035 aa8.28□□□□□ -1.08
SLIRP-204ENST00000555890 CLASRPQ8N2M8 674 aaKnown RBP8.28□□□□□ -1.08
SLIRP-204ENST00000555890 CCDC191Q8NCU4 936 aa8.28□□□□□ -1.08
SLIRP-204ENST00000555890 OTUD7AQ8TE49 926 aaPredicted RBP8.28□□□□□ -1.08
SLIRP-204ENST00000555890 MASTLQ96GX5 879 aa8.28□□□□□ -1.08
SLIRP-204ENST00000555890 TBC1D32Q96NH3 1257 aa8.28□□□□□ -1.08
SLIRP-204ENST00000555890 BICC1Q9H694 974 aaKnown RBP8.28□□□□□ -1.08
SLIRP-204ENST00000555890 RALYQ9UKM9 306 aaKnown RBP8.28□□□□□ -1.08
SLIRP-204ENST00000555890 ACACBO00763 2458 aa8.28□□□□□ -1.08
SLIRP-204ENST00000555890 ZFHX2Q9C0A1 2572 aaPredicted RBP8.27□□□□□ -1.08
SLIRP-204ENST00000555890 ATP5J2-PTCD1G3V325 749 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 H7C1W4 665 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 SMAPO00193 183 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 GFRA3O60609 400 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 GSPT1P15170 499 aaKnown RBP8.27□□□□□ -1.09
SLIRP-204ENST00000555890 SDSP20132 328 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 GUCA2AQ02747 115 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 SEMA3FQ13275 785 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 CCDC93Q567U6 631 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 TBC1D9Q6ZT07 1266 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 UBE3BQ7Z3V4 1068 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 PRR7Q8TB68 274 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 GPATCH3Q96I76 525 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 UIMC1Q96RL1 719 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 UCN2Q96RP3 112 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 IVNS1ABPQ9Y6Y0 642 aa8.27□□□□□ -1.09
SLIRP-204ENST00000555890 USP9XQ93008 2570 aaPredicted RBP8.27□□□□□ -1.09
SLIRP-204ENST00000555890 ANKRD36CQ5JPF3 1778 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 CFAP99D6REC4 459 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 ERC2O15083 957 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 IFIT2P09913 472 aaKnown RBP8.26□□□□□ -1.09
SLIRP-204ENST00000555890 IL6STP40189 918 aaPredicted RBP8.26□□□□□ -1.09
SLIRP-204ENST00000555890 IARSP41252 1262 aaKnown RBP8.26□□□□□ -1.09
SLIRP-204ENST00000555890 TRIM28Q13263 835 aaKnown RBP8.26□□□□□ -1.09
SLIRP-204ENST00000555890 TCIRG1Q13488 830 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 ST3GAL2Q16842 350 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 GRIPAP1Q4V328 841 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 DLK2Q6UY11 383 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 CD99L2Q8TCZ2 262 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 JDP2Q8WYK2 163 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 KAZALD1Q96I82 304 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 IL1RAPL2Q9NP60 686 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 ZMYND8Q9ULU4 1186 aaPredicted RBP8.26□□□□□ -1.09
SLIRP-204ENST00000555890 MAFBQ9Y5Q3 323 aaPredicted RBP8.26□□□□□ -1.09
SLIRP-204ENST00000555890 TTC41PQ6P2S7 1318 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 MAP3K15Q6ZN16 1313 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 SALL3Q9BXA9 1300 aa8.26□□□□□ -1.09
SLIRP-204ENST00000555890 BCORQ6W2J9 1755 aa8.25□□□□□ -1.09
SLIRP-204ENST00000555890 NUP98P52948 1817 aa8.25□□□□□ -1.09
SLIRP-204ENST00000555890 MED19A0JLT2 244 aaPredicted RBP8.25□□□□□ -1.09
SLIRP-204ENST00000555890 CARNS1A5YM72 827 aa8.25□□□□□ -1.09
SLIRP-204ENST00000555890 C6orf229H3BNL8 230 aa8.25□□□□□ -1.09
SLIRP-204ENST00000555890 FARP2O94887 1054 aaPredicted RBP8.25□□□□□ -1.09
SLIRP-204ENST00000555890 REC8O95072 547 aa8.25□□□□□ -1.09
SLIRP-204ENST00000555890 ALDH1A1P00352 501 aa8.25□□□□□ -1.09
SLIRP-204ENST00000555890 HIRAP54198 1017 aaPredicted RBP8.25□□□□□ -1.09
SLIRP-204ENST00000555890 RABL6Q3YEC7 729 aaPredicted RBP8.25□□□□□ -1.09
SLIRP-204ENST00000555890 SLF2Q8IX21 1173 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms