RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 KIRREL1Q96J84 757 aa7.56□□□□□ -1.2
SNX6-204ENST00000555541 CACNA2D2Q9NY47 1150 aa7.56□□□□□ -1.2
SNX6-204ENST00000555541 JAG2Q9Y219 1238 aa7.56□□□□□ -1.2
SNX6-204ENST00000555541 RNF214Q8ND24 703 aa7.55□□□□□ -1.2
SNX6-204ENST00000555541 C20orf173Q96LM9 149 aa7.55□□□□□ -1.2
SNX6-204ENST00000555541 DMRTB1Q96MA1 342 aa7.55□□□□□ -1.2
SNX6-204ENST00000555541 INHBBP09529 407 aa7.54□□□□□ -1.2
SNX6-204ENST00000555541 MED14OSP0DP75 135 aa7.54□□□□□ -1.2
SNX6-204ENST00000555541 FCGRTP55899 365 aa7.54□□□□□ -1.2
SNX6-204ENST00000555541 ERVK-24P63145 666 aa7.54□□□□□ -1.2
SNX6-204ENST00000555541 DSC3Q14574 896 aa7.54□□□□□ -1.2
SNX6-204ENST00000555541 CYFIP1Q7L576 1253 aa7.54□□□□□ -1.2
SNX6-204ENST00000555541 FBXO15Q8NCQ5 510 aaPredicted RBP7.54□□□□□ -1.2
SNX6-204ENST00000555541 TMEM39AQ9NV64 488 aa7.54□□□□□ -1.2
SNX6-204ENST00000555541 NPIPB6E9PJ23 425 aa7.53□□□□□ -1.2
SNX6-204ENST00000555541 EOMESO95936 686 aa7.53□□□□□ -1.2
SNX6-204ENST00000555541 CLCN7P51798 805 aa7.53□□□□□ -1.2
SNX6-204ENST00000555541 ZNF252P-AS1Q0IIN9 211 aa7.53□□□□□ -1.2
SNX6-204ENST00000555541 TMC7Q7Z402 723 aa7.53□□□□□ -1.2
SNX6-204ENST00000555541 UBE3DQ7Z6J8 389 aa7.53□□□□□ -1.2
SNX6-204ENST00000555541 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.53□□□□□ -1.2
SNX6-204ENST00000555541 BCO2Q9BYV7 579 aa7.53□□□□□ -1.2
SNX6-204ENST00000555541 SEMA3GQ9NS98 782 aa7.53□□□□□ -1.2
SNX6-204ENST00000555541 GTF2IRD1Q9UHL9 959 aa7.53□□□□□ -1.2
SNX6-204ENST00000555541 NFIBO00712 420 aa7.52□□□□□ -1.21
SNX6-204ENST00000555541 TMEM67Q5HYA8 995 aa7.52□□□□□ -1.21
SNX6-204ENST00000555541 MPRIPQ6WCQ1 1025 aa7.52□□□□□ -1.21
SNX6-204ENST00000555541 DTHD1Q6ZMT9 781 aa7.52□□□□□ -1.21
SNX6-204ENST00000555541 TMC1Q8TDI8 760 aa7.52□□□□□ -1.21
SNX6-204ENST00000555541 KCNK12Q9HB15 430 aa7.52□□□□□ -1.21
SNX6-204ENST00000555541 PRDM10Q9NQV6 1147 aa7.52□□□□□ -1.21
SNX6-204ENST00000555541 SOWAHDA6NJG2 315 aa7.51□□□□□ -1.21
SNX6-204ENST00000555541 ARNTP27540 789 aa7.51□□□□□ -1.21
SNX6-204ENST00000555541 GDNFP39905 211 aa7.51□□□□□ -1.21
SNX6-204ENST00000555541 RING1Q06587 406 aa7.51□□□□□ -1.21
SNX6-204ENST00000555541 MPZL3Q6UWV2 235 aa7.51□□□□□ -1.21
SNX6-204ENST00000555541 RETREG2Q8NC44 543 aa7.51□□□□□ -1.21
SNX6-204ENST00000555541 C3orf58Q8NDZ4 430 aa7.51□□□□□ -1.21
SNX6-204ENST00000555541 XRCC5P13010 732 aaKnown RBP7.5□□□□□ -1.21
SNX6-204ENST00000555541 KCNA10Q16322 511 aa7.5□□□□□ -1.21
SNX6-204ENST00000555541 NXPE4Q6UWF7 544 aa7.5□□□□□ -1.21
SNX6-204ENST00000555541 SULF2Q8IWU5 870 aa7.5□□□□□ -1.21
SNX6-204ENST00000555541 KCNB2Q92953 911 aa7.5□□□□□ -1.21
SNX6-204ENST00000555541 NSUN3Q9H649 340 aaKnown RBP7.5□□□□□ -1.21
SNX6-204ENST00000555541 CARS2Q9HA77 564 aaKnown RBP7.5□□□□□ -1.21
SNX6-204ENST00000555541 GPN3Q9UHW5 284 aaPredicted RBP7.5□□□□□ -1.21
SNX6-204ENST00000555541 HOXA5P20719 270 aa7.49□□□□□ -1.21
SNX6-204ENST00000555541 BMP6P22004 513 aa7.49□□□□□ -1.21
SNX6-204ENST00000555541 PPP2R3AQ06190 1150 aa7.49□□□□□ -1.21
SNX6-204ENST00000555541 GPBAR1Q8TDU6 330 aa7.49□□□□□ -1.21
SNX6-204ENST00000555541 DIRC2Q96SL1 478 aa7.49□□□□□ -1.21
SNX6-204ENST00000555541 NME2P22392 152 aa7.48□□□□□ -1.21
SNX6-204ENST00000555541 GLDCP23378 1020 aa7.48□□□□□ -1.21
SNX6-204ENST00000555541 CTSWP56202 376 aa7.48□□□□□ -1.21
SNX6-204ENST00000555541 NECAB3Q96P71 396 aaPredicted RBP7.48□□□□□ -1.21
SNX6-204ENST00000555541 ATP13A1Q9HD20 1204 aa7.48□□□□□ -1.21
SNX6-204ENST00000555541 CNTNAP4Q9C0A0 1308 aa7.48□□□□□ -1.21
SNX6-204ENST00000555541 ENOX2Q16206 610 aaKnown RBP7.47□□□□□ -1.21
SNX6-204ENST00000555541 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.47□□□□□ -1.21
SNX6-204ENST00000555541 MAP1SQ66K74 1059 aaPredicted RBP7.47□□□□□ -1.21
SNX6-204ENST00000555541 ATG14Q6ZNE5 492 aa7.47□□□□□ -1.21
SNX6-204ENST00000555541 C14orf37Q86TY3 774 aa7.47□□□□□ -1.21
SNX6-204ENST00000555541 GRIN3AQ8TCU5 1115 aa7.47□□□□□ -1.21
SNX6-204ENST00000555541 NLRP2Q9NX02 1062 aa7.47□□□□□ -1.21
SNX6-204ENST00000555541 ETV2O00321 342 aaPredicted RBP7.46□□□□□ -1.22
SNX6-204ENST00000555541 TREHO43280 583 aa7.46□□□□□ -1.22
SNX6-204ENST00000555541 RASIP1Q5U651 963 aa7.46□□□□□ -1.22
SNX6-204ENST00000555541 C22orf34Q6ZV56 151 aa7.46□□□□□ -1.22
SNX6-204ENST00000555541 HSPA12BQ96MM6 686 aa7.46□□□□□ -1.22
SNX6-204ENST00000555541 SSU72Q9NP77 194 aaKnown RBP7.46□□□□□ -1.22
SNX6-204ENST00000555541 PPP4R2Q9NY27 417 aa7.46□□□□□ -1.22
SNX6-204ENST00000555541 SMG5Q9UPR3 1016 aaKnown RBP7.46□□□□□ -1.22
SNX6-204ENST00000555541 MAPK8IP1Q9UQF2 711 aa7.46□□□□□ -1.22
SNX6-204ENST00000555541 GNEQ9Y223 722 aaKnown RBP7.46□□□□□ -1.22
SNX6-204ENST00000555541 AKAP2Q9Y2D5 859 aa7.46□□□□□ -1.22
SNX6-204ENST00000555541 PRR33A8MZF0 331 aa7.45□□□□□ -1.22
SNX6-204ENST00000555541 ENC1O14682 589 aa7.45□□□□□ -1.22
SNX6-204ENST00000555541 PAGE1O75459 146 aa7.45□□□□□ -1.22
SNX6-204ENST00000555541 PPM1JQ5JR12 505 aa7.45□□□□□ -1.22
SNX6-204ENST00000555541 DCTN4Q9UJW0 460 aa7.45□□□□□ -1.22
SNX6-204ENST00000555541 PNMA6FA0A0J9YX94 578 aa7.44□□□□□ -1.22
SNX6-204ENST00000555541 TMEM253P0C7T8 217 aa7.44□□□□□ -1.22
SNX6-204ENST00000555541 PLCB3Q01970 1234 aa7.44□□□□□ -1.22
SNX6-204ENST00000555541 NPAS4Q8IUM7 802 aa7.44□□□□□ -1.22
SNX6-204ENST00000555541 EMILIN2Q9BXX0 1053 aa7.44□□□□□ -1.22
SNX6-204ENST00000555541 OSBPL7Q9BZF2 842 aa7.44□□□□□ -1.22
SNX6-204ENST00000555541 ST14Q9Y5Y6 855 aa7.44□□□□□ -1.22
SNX6-204ENST00000555541 GNAT3A8MTJ3 354 aa7.43□□□□□ -1.22
SNX6-204ENST00000555541 SRFP11831 508 aa7.43□□□□□ -1.22
SNX6-204ENST00000555541 LINC00310P59036 64 aa7.43□□□□□ -1.22
SNX6-204ENST00000555541 KRTAP10-2P60368 255 aa7.43□□□□□ -1.22
SNX6-204ENST00000555541 HNRNPUQ00839 825 aaKnown RBP eCLIP7.43□□□□□ -1.22
SNX6-204ENST00000555541 CIAPIN1Q6FI81 312 aa7.43□□□□□ -1.22
SNX6-204ENST00000555541 ANKRD24Q8TF21 1146 aa7.43□□□□□ -1.22
SNX6-204ENST00000555541 FOXQ1Q9C009 403 aa7.43□□□□□ -1.22
SNX6-204ENST00000555541 RBAK-RBAKDNI3L0D1 243 aa7.42□□□□□ -1.22
SNX6-204ENST00000555541 SLITRK5O94991 958 aa7.42□□□□□ -1.22
SNX6-204ENST00000555541 ZBTB37Q5TC79 503 aa7.42□□□□□ -1.22
SNX6-204ENST00000555541 SETDB2Q96T68 719 aa7.42□□□□□ -1.22
SNX6-204ENST00000555541 EPB41L4BQ9H329 900 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms