RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 WDHD1O75717 1129 aaPredicted RBP28.16■■■□□ 2.1
TMEM260-207ENST00000555497 ZNF165P49910 485 aa28.16■■■□□ 2.1
TMEM260-207ENST00000555497 GRAPQ13588 217 aa28.16■■■□□ 2.1
TMEM260-207ENST00000555497 FANCBQ8NB91 859 aa28.16■■■□□ 2.1
TMEM260-207ENST00000555497 GRAPLQ8TC17 118 aaPredicted RBP28.16■■■□□ 2.1
TMEM260-207ENST00000555497 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.16■■■□□ 2.1
TMEM260-207ENST00000555497 EP400Q96L91 3159 aa28.16■■■□□ 2.1
TMEM260-207ENST00000555497 SLC39A14Q15043 492 aa28.16■■■□□ 2.1
TMEM260-207ENST00000555497 C11orf57Q6ZUT1 292 aaPredicted RBP28.16■■■□□ 2.1
TMEM260-207ENST00000555497 NUP133Q8WUM0 1156 aa28.16■■■□□ 2.1
TMEM260-207ENST00000555497 TRPC5Q9UL62 973 aaPredicted RBP28.16■■■□□ 2.1
TMEM260-207ENST00000555497 FGRP09769 529 aa28.15■■■□□ 2.1
TMEM260-207ENST00000555497 PRR5LQ6MZQ0 368 aa28.15■■■□□ 2.1
TMEM260-207ENST00000555497 UBR3Q6ZT12 1888 aa28.15■■■□□ 2.1
TMEM260-207ENST00000555497 CRACR2BQ8N4Y2 399 aaPredicted RBP28.15■■■□□ 2.1
TMEM260-207ENST00000555497 ENAHQ8N8S7 591 aaPredicted RBP28.15■■■□□ 2.1
TMEM260-207ENST00000555497 MARCKSP29966 332 aaPredicted RBP28.15■■■□□ 2.1
TMEM260-207ENST00000555497 TRIM29Q14134 588 aa28.15■■■□□ 2.1
TMEM260-207ENST00000555497 ANKIB1Q9P2G1 1089 aa28.15■■■□□ 2.1
TMEM260-207ENST00000555497 CCDC88AQ3V6T2 1871 aa28.15■■■□□ 2.1
TMEM260-207ENST00000555497 PTPAQ15257 358 aa28.14■■■□□ 2.1
TMEM260-207ENST00000555497 TDRD7Q8NHU6 1098 aaKnown RBP28.14■■■□□ 2.1
TMEM260-207ENST00000555497 MAP3K14Q99558 947 aa28.14■■■□□ 2.1
TMEM260-207ENST00000555497 DCP1AQ9NPI6 582 aaPredicted RBP28.14■■■□□ 2.1
TMEM260-207ENST00000555497 ZSCAN10Q96SZ4 725 aaPredicted RBP28.14■■■□□ 2.09
TMEM260-207ENST00000555497 GNL2Q13823 731 aaKnown RBP28.13■■■□□ 2.09
TMEM260-207ENST00000555497 GPR101Q96P66 508 aaPredicted RBP28.13■■■□□ 2.09
TMEM260-207ENST00000555497 TTC12Q9H892 705 aaPredicted RBP28.13■■■□□ 2.09
TMEM260-207ENST00000555497 KCNJ14Q9UNX9 436 aa28.13■■■□□ 2.09
TMEM260-207ENST00000555497 RCAN1P53805 252 aa28.12■■■□□ 2.09
TMEM260-207ENST00000555497 MROH7-TTC4A0A0A0MT08 1334 aa28.12■■■□□ 2.09
TMEM260-207ENST00000555497 MAST2Q6P0Q8 1798 aa28.12■■■□□ 2.09
TMEM260-207ENST00000555497 CYP2D6P10635 497 aa28.12■■■□□ 2.09
TMEM260-207ENST00000555497 GYS1P13807 737 aa28.12■■■□□ 2.09
TMEM260-207ENST00000555497 IQCB1Q15051 598 aa28.12■■■□□ 2.09
TMEM260-207ENST00000555497 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.12■■■□□ 2.09
TMEM260-207ENST00000555497 ADRA2BP18089 450 aa28.11■■■□□ 2.09
TMEM260-207ENST00000555497 STX1AQ16623 288 aa28.11■■■□□ 2.09
TMEM260-207ENST00000555497 TRIM22Q8IYM9 498 aa28.11■■■□□ 2.09
TMEM260-207ENST00000555497 CERKQ8TCT0 537 aa28.11■■■□□ 2.09
TMEM260-207ENST00000555497 WASF1Q92558 559 aa28.11■■■□□ 2.09
TMEM260-207ENST00000555497 CRNKL1Q9BZJ0 848 aaKnown RBP28.11■■■□□ 2.09
TMEM260-207ENST00000555497 BTBD18B2RXH4 712 aa28.11■■■□□ 2.09
TMEM260-207ENST00000555497 OFD1O75665 1012 aa28.11■■■□□ 2.09
TMEM260-207ENST00000555497 MMP1P03956 469 aa28.11■■■□□ 2.09
TMEM260-207ENST00000555497 LEMD3Q9Y2U8 911 aa28.11■■■□□ 2.09
TMEM260-207ENST00000555497 CCDC196A0A1B0GTZ2 297 aa28.1■■■□□ 2.09
TMEM260-207ENST00000555497 CMA1P23946 247 aa28.1■■■□□ 2.09
TMEM260-207ENST00000555497 NAP1L5Q96NT1 182 aaPredicted RBP28.1■■■□□ 2.09
TMEM260-207ENST00000555497 MYH6P13533 1939 aa28.1■■■□□ 2.09
TMEM260-207ENST00000555497 ZBTB22O15209 634 aa28.1■■■□□ 2.09
TMEM260-207ENST00000555497 GRIK5Q16478 980 aa28.1■■■□□ 2.09
TMEM260-207ENST00000555497 SPC24Q8NBT2 197 aa28.1■■■□□ 2.09
TMEM260-207ENST00000555497 SDF4Q9BRK5 362 aa28.1■■■□□ 2.09
TMEM260-207ENST00000555497 PFKFB1P16118 471 aa28.09■■■□□ 2.09
TMEM260-207ENST00000555497 LAMB1P07942 1786 aa28.08■■■□□ 2.09
TMEM260-207ENST00000555497 DLEC1Q9Y238 1755 aa28.08■■■□□ 2.09
TMEM260-207ENST00000555497 ZNF202O95125 648 aa28.08■■■□□ 2.09
TMEM260-207ENST00000555497 DEXIO95424 95 aa28.08■■■□□ 2.09
TMEM260-207ENST00000555497 CAVIN2O95810 425 aa28.08■■■□□ 2.09
TMEM260-207ENST00000555497 NOSTRINQ8IVI9 506 aa28.08■■■□□ 2.09
TMEM260-207ENST00000555497 SHISA4Q96DD7 197 aa28.08■■■□□ 2.09
TMEM260-207ENST00000555497 QTRT2Q9H974 415 aaKnown RBP28.08■■■□□ 2.09
TMEM260-207ENST00000555497 ATP8A2Q9NTI2 1148 aa28.08■■■□□ 2.09
TMEM260-207ENST00000555497 KIAA1551Q9HCM1 1747 aa28.08■■■□□ 2.09
TMEM260-207ENST00000555497 IFIT1BQ5T764 474 aaKnown RBP28.08■■■□□ 2.09
TMEM260-207ENST00000555497 DZIP1Q86YF9 867 aaKnown RBP28.08■■■□□ 2.09
TMEM260-207ENST00000555497 DIS3L2Q8IYB7 885 aaKnown RBP28.08■■■□□ 2.09
TMEM260-207ENST00000555497 XDHP47989 1333 aa28.08■■■□□ 2.09
TMEM260-207ENST00000555497 NMT2O60551 498 aa28.07■■■□□ 2.08
TMEM260-207ENST00000555497 PPP6R2O75170 966 aa28.07■■■□□ 2.08
TMEM260-207ENST00000555497 PCP11498 1178 aaKnown RBP28.07■■■□□ 2.08
TMEM260-207ENST00000555497 TOB1P50616 345 aaPredicted RBP28.07■■■□□ 2.08
TMEM260-207ENST00000555497 GPSM2P81274 684 aa28.07■■■□□ 2.08
TMEM260-207ENST00000555497 FUT2Q10981 343 aa28.07■■■□□ 2.08
TMEM260-207ENST00000555497 ORC4O43929 436 aa28.07■■■□□ 2.08
TMEM260-207ENST00000555497 SHC4Q6S5L8 630 aa28.07■■■□□ 2.08
TMEM260-207ENST00000555497 SERPINB2P05120 415 aa28.06■■■□□ 2.08
TMEM260-207ENST00000555497 CRY2Q49AN0 593 aa28.06■■■□□ 2.08
TMEM260-207ENST00000555497 SPTY2D1Q68D10 685 aaPredicted RBP28.06■■■□□ 2.08
TMEM260-207ENST00000555497 IQCA1Q86XH1 822 aa28.06■■■□□ 2.08
TMEM260-207ENST00000555497 CLIC6Q96NY7 704 aa28.06■■■□□ 2.08
TMEM260-207ENST00000555497 TROAPQ12815 778 aa28.06■■■□□ 2.08
TMEM260-207ENST00000555497 FAM47AQ5JRC9 791 aa28.06■■■□□ 2.08
TMEM260-207ENST00000555497 PLA2G4DQ86XP0 818 aa28.06■■■□□ 2.08
TMEM260-207ENST00000555497 RPGRQ92834 1020 aaKnown RBP28.06■■■□□ 2.08
TMEM260-207ENST00000555497 ZNF75DP51815 510 aa28.05■■■□□ 2.08
TMEM260-207ENST00000555497 NR5A1Q13285 461 aa28.05■■■□□ 2.08
TMEM260-207ENST00000555497 PKN1Q16512 942 aa28.05■■■□□ 2.08
TMEM260-207ENST00000555497 SBK1Q52WX2 424 aa28.05■■■□□ 2.08
TMEM260-207ENST00000555497 OXER1Q8TDS5 423 aa28.05■■■□□ 2.08
TMEM260-207ENST00000555497 FBXW7Q969H0 707 aa28.05■■■□□ 2.08
TMEM260-207ENST00000555497 ANO10Q9NW15 660 aa28.05■■■□□ 2.08
TMEM260-207ENST00000555497 KIAA1468Q9P260 1216 aa28.05■■■□□ 2.08
TMEM260-207ENST00000555497 PLEKHA8P1O95397 391 aa28.04■■■□□ 2.08
TMEM260-207ENST00000555497 LDHBP07195 334 aaKnown RBP28.04■■■□□ 2.08
TMEM260-207ENST00000555497 USP17L8P0C7I0 530 aa28.04■■■□□ 2.08
TMEM260-207ENST00000555497 SLC4A8Q2Y0W8 1093 aa28.04■■■□□ 2.08
TMEM260-207ENST00000555497 WDR66Q8TBY9 1149 aa28.04■■■□□ 2.08
TMEM260-207ENST00000555497 RNF26Q9BY78 433 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms