RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 RAI14Q9P0K7 980 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 VPS18Q9P253 973 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 LCMT1Q9UIC8 334 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 CDC23Q9UJX2 597 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 NFE2L3Q9Y4A8 694 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 CSF1RP07333 972 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 PDE4BQ07343 736 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 TRIM28Q13263 835 aaKnown RBP18.26■□□□□ 0.51
MARK3-209ENST00000555235 KARSQ15046 597 aaKnown RBP18.26■□□□□ 0.51
MARK3-209ENST00000555235 FOXP4Q8IVH2 680 aaPredicted RBP18.26■□□□□ 0.51
MARK3-209ENST00000555235 ANKZF1Q9H8Y5 726 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 PDE11AQ9HCR9 933 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 ANGEL1Q9UNK9 670 aaKnown RBP18.26■□□□□ 0.51
MARK3-209ENST00000555235 PAPPAQ13219 1627 aa18.26■□□□□ 0.51
MARK3-209ENST00000555235 TRIM66O15016 1216 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 KIF5CO60282 957 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 BMP6P22004 513 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 NKX1-1Q15270 411 aaPredicted RBP18.25■□□□□ 0.51
MARK3-209ENST00000555235 NKX2-3Q8TAU0 364 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 DESI2Q9BSY9 194 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 SH2B2O14492 632 aaPredicted RBP18.25■□□□□ 0.51
MARK3-209ENST00000555235 PCCAP05165 728 aaPredicted RBP18.25■□□□□ 0.51
MARK3-209ENST00000555235 TUBBP07437 444 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 CDC27P30260 824 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 MCM6Q14566 821 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 KRT40Q6A162 431 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 CPLX2Q6PUV4 134 aaKnown RBP18.25■□□□□ 0.51
MARK3-209ENST00000555235 CYB5R4Q7L1T6 521 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 GBP3Q9H0R5 595 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 MRPL44Q9H9J2 332 aaKnown RBP18.25■□□□□ 0.51
MARK3-209ENST00000555235 DENND2AQ9ULE3 1009 aa18.25■□□□□ 0.51
MARK3-209ENST00000555235 TNS2Q63HR2 1409 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 AKR1B15C9JRZ8 316 aaPredicted RBP18.24■□□□□ 0.51
MARK3-209ENST00000555235 ADD2P35612 726 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 METAP2P50579 478 aaKnown RBP eCLIP18.24■□□□□ 0.51
MARK3-209ENST00000555235 TRDNQ13061 729 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 NT5DC1Q5TFE4 455 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 TBC1D10CQ8IV04 446 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 TRIML1Q8N9V2 468 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.24■□□□□ 0.51
MARK3-209ENST00000555235 RIC1Q4ADV7 1423 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 MCAMP43121 646 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 MDM2Q00987 491 aaPredicted RBP18.24■□□□□ 0.51
MARK3-209ENST00000555235 TAF7LQ5H9L4 462 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 CLIC6Q96NY7 704 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 CCDC85AQ96PX6 553 aaPredicted RBP18.24■□□□□ 0.51
MARK3-209ENST00000555235 MAN1B1Q9UKM7 699 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 L1RE1Q9UN81 338 aa18.24■□□□□ 0.51
MARK3-209ENST00000555235 IFIT5Q13325 482 aaKnown RBP18.23■□□□□ 0.51
MARK3-209ENST00000555235 POSTNQ15063 836 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 PLCD3Q8N3E9 789 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 KRI1Q8N9T8 703 aaKnown RBP18.23■□□□□ 0.51
MARK3-209ENST00000555235 ZSWIM4Q9H7M6 989 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 MKRN1Q9UHC7 482 aaKnown RBP18.23■□□□□ 0.51
MARK3-209ENST00000555235 MYH7P12883 1935 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 SPATA31A3Q5VYP0 1347 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 ATRNO75882 1429 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 TRIM29Q14134 588 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 NR1I3Q14994 352 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 HSP90AA4PQ58FG1 418 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 FAM89AQ96GI7 184 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 ACBD3Q9H3P7 528 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 RIPOR2Q9Y4F9 1068 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 ADGRG1Q9Y653 693 aa18.23■□□□□ 0.51
MARK3-209ENST00000555235 NOP2P46087 812 aaKnown RBP18.22■□□□□ 0.51
MARK3-209ENST00000555235 HSP90B2PQ58FF3 399 aa18.22■□□□□ 0.51
MARK3-209ENST00000555235 APOA5Q6Q788 366 aa18.22■□□□□ 0.51
MARK3-209ENST00000555235 FAM71BQ8TC56 605 aa18.22■□□□□ 0.51
MARK3-209ENST00000555235 ZNF512BQ96KM6 892 aaPredicted RBP18.22■□□□□ 0.51
MARK3-209ENST00000555235 LZTFL1Q9NQ48 299 aa18.22■□□□□ 0.51
MARK3-209ENST00000555235 PUF60Q9UHX1 559 aaKnown RBP18.22■□□□□ 0.51
MARK3-209ENST00000555235 ECM29Q5VYK3 1845 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 A0A1B0GTH6 734 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 FMR1Q06787 632 aaKnown RBP eCLIP18.21■□□□□ 0.51
MARK3-209ENST00000555235 ZBTB38Q8NAP3 1195 aaPredicted RBP18.21■□□□□ 0.51
MARK3-209ENST00000555235 LTBP4Q8N2S1 1624 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 CTAGE9A4FU28 777 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 SOWAHDA6NJG2 315 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 SARSP49591 514 aaKnown RBP18.21■□□□□ 0.51
MARK3-209ENST00000555235 MORC3Q14149 939 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 NTRK3Q16288 839 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 SLC9C2Q5TAH2 1124 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 PHKBQ93100 1093 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 PNKPQ96T60 521 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 IRX2Q9BZI1 471 aaPredicted RBP18.21■□□□□ 0.51
MARK3-209ENST00000555235 SENP2Q9HC62 589 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 DCCP43146 1447 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 WDR17Q8IZU2 1322 aa18.21■□□□□ 0.51
MARK3-209ENST00000555235 AKAP11Q9UKA4 1901 aa18.2■□□□□ 0.5
MARK3-209ENST00000555235 RXRAP19793 462 aa18.2■□□□□ 0.5
MARK3-209ENST00000555235 ERCC5P28715 1186 aaPredicted RBP18.2■□□□□ 0.5
MARK3-209ENST00000555235 MTF1Q14872 753 aa18.2■□□□□ 0.5
MARK3-209ENST00000555235 METTL24Q5JXM2 366 aa18.2■□□□□ 0.5
MARK3-209ENST00000555235 PPFIBP1Q86W92 1011 aa18.2■□□□□ 0.5
MARK3-209ENST00000555235 IGDCC4Q8TDY8 1250 aa18.2■□□□□ 0.5
MARK3-209ENST00000555235 TMEM87BQ96K49 555 aa18.2■□□□□ 0.5
MARK3-209ENST00000555235 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.2■□□□□ 0.5
MARK3-209ENST00000555235 ABCB6Q9NP58 842 aa18.2■□□□□ 0.5
MARK3-209ENST00000555235 MAGEA9P43362 315 aa18.2■□□□□ 0.5
MARK3-209ENST00000555235 PIP4K2BP78356 416 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms