RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 MYSM1Q5VVJ2 828 aa14□□□□□ -0.17
ARHGEF40-206ENST00000555232 ANKRD20A12PQ8NF67 263 aa14□□□□□ -0.17
ARHGEF40-206ENST00000555232 ATF5Q9Y2D1 282 aaPredicted RBP14□□□□□ -0.17
ARHGEF40-206ENST00000555232 SALL3Q9BXA9 1300 aa14□□□□□ -0.17
ARHGEF40-206ENST00000555232 TPM1P09493 284 aa14□□□□□ -0.17
ARHGEF40-206ENST00000555232 GNAT2P19087 354 aa14□□□□□ -0.17
ARHGEF40-206ENST00000555232 KIF5BP33176 963 aa14□□□□□ -0.17
ARHGEF40-206ENST00000555232 BTDP43251 543 aa14□□□□□ -0.17
ARHGEF40-206ENST00000555232 ZFP91Q96JP5 570 aaPredicted RBP14□□□□□ -0.17
ARHGEF40-206ENST00000555232 RPS6KA4O75676 772 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 SPICE1Q8N0Z3 855 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 FANCBQ8NB91 859 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 PCDHA7Q9UN72 937 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 UBE3CQ15386 1083 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 KCNG4Q8TDN1 519 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 CBX8Q9HC52 389 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 NDUFA8P51970 172 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 PNOCQ13519 176 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 STX1AQ16623 288 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 CCDC47Q96A33 483 aaKnown RBP13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 FAM84BQ96KN1 310 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 BLZF1Q9H2G9 400 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 ZSWIM4Q9H7M6 989 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 CPDO75976 1380 aa13.99□□□□□ -0.17
ARHGEF40-206ENST00000555232 CDC27P30260 824 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 LRMPQ12912 555 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 FCHSD1Q86WN1 690 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 ZNF287Q9HBT7 754 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 IFNKQ9P0W0 207 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 ZNF500O60304 480 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 RAD17O75943 681 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 ZNF202O95125 648 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 IBSPP21815 317 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 CASP1P29466 404 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 USH1GQ495M9 461 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 TMEM87BQ96K49 555 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 USP40Q9NVE5 1235 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 NCOA3Q9Y6Q9 1424 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 NRXN3Q9Y4C0 1643 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 PLEKHA8P1O95397 391 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 HLA-DOAP06340 250 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 SP4Q02446 784 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 UTP14CQ5TAP6 766 aaKnown RBP13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 FBXO18Q8NFZ0 1043 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 SMARCE1Q969G3 411 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 GPR108Q9NPR9 543 aa13.98□□□□□ -0.17
ARHGEF40-206ENST00000555232 USP32Q8NFA0 1604 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 CCDC178Q5BJE1 867 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 ZNF34Q8IZ26 560 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 OGFOD1Q8N543 542 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 GUCY1A2P33402 732 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 SLC16A2P36021 539 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 SNAP25P60880 206 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 EN1Q05925 392 aaPredicted RBP13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 UBE4AQ14139 1066 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 TMTC2Q8N394 836 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 NARFQ9UHQ1 456 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 SFPQP23246 707 aaKnown RBP eCLIP13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 CHRNA5P30532 468 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 NRBP1Q9UHY1 535 aa13.97□□□□□ -0.17
ARHGEF40-206ENST00000555232 TCP10L2B9ZVM9 353 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 CASP7P55210 303 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 C2CD5Q86YS7 1000 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 LARGE2Q8N3Y3 721 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 WDR66Q8TBY9 1149 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 H0YIN7 160 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 USP17L2Q6R6M4 530 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 PNMA1Q8ND90 353 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 SH3RF3Q8TEJ3 882 aaPredicted RBP13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 ZSCAN10Q96SZ4 725 aaPredicted RBP13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 CAMTA1Q9Y6Y1 1673 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 GSG1L2A8MUP6 293 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 PPIP5K2O43314 1243 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 GSTO1P78417 241 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 NKX1-1Q15270 411 aaPredicted RBP13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 TXNRD1Q16881 649 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 EYA3Q99504 573 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 CEP131Q9UPN4 1083 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 CARMIL3Q8ND23 1372 aa13.96□□□□□ -0.17
ARHGEF40-206ENST00000555232 OVOS2A0A0G2JMS6 1433 aa13.96□□□□□ -0.18
ARHGEF40-206ENST00000555232 FAM160A1Q05DH4 1040 aa13.96□□□□□ -0.18
ARHGEF40-206ENST00000555232 GOLGA8FQ08AF8 430 aa13.96□□□□□ -0.18
ARHGEF40-206ENST00000555232 GOLGA8DPQ0D2H9 430 aa13.96□□□□□ -0.18
ARHGEF40-206ENST00000555232 ZNF274Q96GC6 653 aaPredicted RBP13.96□□□□□ -0.18
ARHGEF40-206ENST00000555232 KCNH3Q9ULD8 1083 aa13.96□□□□□ -0.18
ARHGEF40-206ENST00000555232 PEAK1Q9H792 1746 aa13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 SPATA31A5Q5VU36 1347 aa13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 SPATA31A7Q8IWB4 1347 aa13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 CSF1RP07333 972 aa13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 SLURP2P0DP57 97 aa13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 KRT2P35908 639 aa13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 EVX2Q03828 476 aa13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 TRIM28Q13263 835 aaKnown RBP13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 RRAGBQ5VZM2 374 aa13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 PDCL2Q8N4E4 241 aa13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 BIN2Q9UBW5 565 aaPredicted RBP13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 NTSR2O95665 410 aa13.95□□□□□ -0.18
ARHGEF40-206ENST00000555232 TOP1P11387 765 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms