RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 ATP8B2P98198 1209 aa19.28■□□□□ 0.68
ARHGEF40-205ENST00000555052 RRP1BQ14684 758 aaKnown RBP19.28■□□□□ 0.68
ARHGEF40-205ENST00000555052 TEX11Q8IYF3 940 aa19.28■□□□□ 0.68
ARHGEF40-205ENST00000555052 SH3RF3Q8TEJ3 882 aaPredicted RBP19.28■□□□□ 0.68
ARHGEF40-205ENST00000555052 DBNDD2Q9BQY9 259 aa19.28■□□□□ 0.68
ARHGEF40-205ENST00000555052 LRP2BPQ9P2M1 347 aa19.28■□□□□ 0.68
ARHGEF40-205ENST00000555052 CDK5RAP2Q96SN8 1893 aa19.27■□□□□ 0.68
ARHGEF40-205ENST00000555052 MYO5AQ9Y4I1 1855 aaKnown RBP19.27■□□□□ 0.68
ARHGEF40-205ENST00000555052 TREML2Q5T2D2 321 aa19.27■□□□□ 0.68
ARHGEF40-205ENST00000555052 PROCA1Q8NCQ7 364 aaPredicted RBP19.27■□□□□ 0.68
ARHGEF40-205ENST00000555052 SNRKQ9NRH2 765 aa19.27■□□□□ 0.68
ARHGEF40-205ENST00000555052 GABRQQ9UN88 632 aa19.27■□□□□ 0.68
ARHGEF40-205ENST00000555052 FOCADQ5VW36 1801 aa19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 CYP2E1P05181 493 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 RLBP1P12271 317 aa19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 CCL5P13501 91 aa19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 PPP4CP60510 307 aa19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 TTC39AQ5SRH9 613 aa19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 NAA16Q6N069 864 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 UBE2Q1Q7Z7E8 422 aa19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 SLAIN1Q8ND83 568 aa19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 SMCR8Q8TEV9 937 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 ZNF512BQ96KM6 892 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 C1orf115Q9H7X2 142 aa19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 HERC5Q9UII4 1024 aaKnown RBP19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 NOP58Q9Y2X3 529 aaKnown RBP19.26■□□□□ 0.67
ARHGEF40-205ENST00000555052 GJB1P08034 283 aa19.25■□□□□ 0.67
ARHGEF40-205ENST00000555052 CAP2P40123 477 aa19.25■□□□□ 0.67
ARHGEF40-205ENST00000555052 GJA8P48165 433 aa19.25■□□□□ 0.67
ARHGEF40-205ENST00000555052 CCDC158Q5M9N0 1113 aa19.25■□□□□ 0.67
ARHGEF40-205ENST00000555052 ADGRA1Q86SQ6 560 aa19.25■□□□□ 0.67
ARHGEF40-205ENST00000555052 ZNF280CQ8ND82 737 aa19.25■□□□□ 0.67
ARHGEF40-205ENST00000555052 TBC1D2Q9BYX2 928 aa19.25■□□□□ 0.67
ARHGEF40-205ENST00000555052 AATFQ9NY61 560 aaKnown RBP eCLIP19.25■□□□□ 0.67
ARHGEF40-205ENST00000555052 ZBTB7BO15156 539 aaPredicted RBP19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 IGSF3O75054 1194 aa19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 SURF6O75683 361 aaKnown RBP19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 FLT3LGP49771 235 aa19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 SPP2Q13103 211 aa19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 OS9Q13438 667 aaPredicted RBP19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 IRF5Q13568 498 aa19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 FAM110CQ1W6H9 321 aa19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 METTL16Q86W50 562 aaKnown RBP19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 FTSJ3Q8IY81 847 aaKnown RBP19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 NKX2-3Q8TAU0 364 aa19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 DHX36Q9H2U1 1008 aaKnown RBP19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 PI4KBQ9UBF8 816 aa19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 DBNLQ9UJU6 430 aaKnown RBP19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 PNMA3Q9UL41 463 aa19.24■□□□□ 0.67
ARHGEF40-205ENST00000555052 BAG3O95817 575 aa19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 PLCG2P16885 1265 aa19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 HMGCS2P54868 508 aa19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 UBXN2AP68543 259 aa19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 HNRNPUQ00839 825 aaKnown RBP eCLIP19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 SH3D19Q5HYK7 790 aa19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 ANKRD13CQ8N6S4 541 aa19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 NOL10Q9BSC4 688 aaKnown RBP19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 RNF208Q9H0X6 261 aa19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 DNAJC18Q9H819 358 aa19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 TLR7Q9NYK1 1049 aaKnown RBP19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 FLT1P17948 1338 aa19.23■□□□□ 0.67
ARHGEF40-205ENST00000555052 USP17L5A8MUK1 530 aa19.22■□□□□ 0.67
ARHGEF40-205ENST00000555052 TNPO2O14787 897 aaKnown RBP19.22■□□□□ 0.67
ARHGEF40-205ENST00000555052 ADCY3O60266 1144 aa19.22■□□□□ 0.67
ARHGEF40-205ENST00000555052 ZAP70P43403 619 aa19.22■□□□□ 0.67
ARHGEF40-205ENST00000555052 ITPRIPQ8IWB1 547 aa19.22■□□□□ 0.67
ARHGEF40-205ENST00000555052 PXYLP1Q8TE99 480 aa19.22■□□□□ 0.67
ARHGEF40-205ENST00000555052 UNC93B1Q9H1C4 597 aa19.22■□□□□ 0.67
ARHGEF40-205ENST00000555052 PIH1D3Q9NQM4 214 aaKnown RBP19.22■□□□□ 0.67
ARHGEF40-205ENST00000555052 BIN2Q9UBW5 565 aaPredicted RBP19.22■□□□□ 0.67
ARHGEF40-205ENST00000555052 H0YGN5 161 aa19.21■□□□□ 0.67
ARHGEF40-205ENST00000555052 ELNP15502 786 aa19.21■□□□□ 0.67
ARHGEF40-205ENST00000555052 DNAH12Q6ZR08 3092 aa19.21■□□□□ 0.67
ARHGEF40-205ENST00000555052 MAPKAPK5Q8IW41 473 aa19.21■□□□□ 0.67
ARHGEF40-205ENST00000555052 TGFBRAP1Q8WUH2 860 aa19.21■□□□□ 0.67
ARHGEF40-205ENST00000555052 EAF2Q96CJ1 260 aaPredicted RBP19.21■□□□□ 0.67
ARHGEF40-205ENST00000555052 WDR18Q9BV38 432 aa19.21■□□□□ 0.67
ARHGEF40-205ENST00000555052 INHAP05111 366 aa19.2■□□□□ 0.66
ARHGEF40-205ENST00000555052 GCLCP48506 637 aaPredicted RBP19.2■□□□□ 0.66
ARHGEF40-205ENST00000555052 JAG1P78504 1218 aa19.2■□□□□ 0.66
ARHGEF40-205ENST00000555052 CEP85Q6P2H3 762 aa19.2■□□□□ 0.66
ARHGEF40-205ENST00000555052 U2AF1L4Q8WU68 220 aaKnown RBP19.2■□□□□ 0.66
ARHGEF40-205ENST00000555052 ASCC2Q9H1I8 757 aaPredicted RBP19.2■□□□□ 0.66
ARHGEF40-205ENST00000555052 ASNSP08243 561 aa19.19■□□□□ 0.66
ARHGEF40-205ENST00000555052 FXR1P51114 621 aaKnown RBP eCLIP19.19■□□□□ 0.66
ARHGEF40-205ENST00000555052 PABPC4Q13310 644 aaKnown RBP eCLIP19.19■□□□□ 0.66
ARHGEF40-205ENST00000555052 MIER1Q8N108 512 aa19.19■□□□□ 0.66
ARHGEF40-205ENST00000555052 CCDC8Q9H0W5 538 aaPredicted RBP19.19■□□□□ 0.66
ARHGEF40-205ENST00000555052 AS3MTQ9HBK9 375 aa19.19■□□□□ 0.66
ARHGEF40-205ENST00000555052 COLQQ9Y215 455 aaPredicted RBP19.19■□□□□ 0.66
ARHGEF40-205ENST00000555052 MTMR2Q13614 643 aa19.18■□□□□ 0.66
ARHGEF40-205ENST00000555052 SHROOM1Q2M3G4 852 aaPredicted RBP19.18■□□□□ 0.66
ARHGEF40-205ENST00000555052 FOXP4Q8IVH2 680 aaPredicted RBP19.18■□□□□ 0.66
ARHGEF40-205ENST00000555052 COA7Q96BR5 231 aa19.18■□□□□ 0.66
ARHGEF40-205ENST00000555052 PALD1Q9ULE6 856 aa19.18■□□□□ 0.66
ARHGEF40-205ENST00000555052 A0A0C4DFX4 3053 aa19.17■□□□□ 0.66
ARHGEF40-205ENST00000555052 SGPL1O95470 568 aa19.17■□□□□ 0.66
ARHGEF40-205ENST00000555052 BACE1P56817 501 aa19.17■□□□□ 0.66
ARHGEF40-205ENST00000555052 DYNLL1P63167 89 aaKnown RBP19.17■□□□□ 0.66
ARHGEF40-205ENST00000555052 PAK6Q9NQU5 681 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms