RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PASKQ96RG2 1323 aa19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 MINDY4BA8MYZ0 360 aa19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 ZNF213O14771 459 aa19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 PPP1R12BO60237 982 aaPredicted RBP19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 GABPAQ06546 454 aa19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 CDAN1Q8IWY9 1227 aa19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 CRACR2BQ8N4Y2 399 aaPredicted RBP19.56■□□□□ 0.72
SPTLC2-203ENST00000554901 TRAF5O00463 557 aa19.55■□□□□ 0.72
SPTLC2-203ENST00000554901 NT5C2P49902 561 aa19.55■□□□□ 0.72
SPTLC2-203ENST00000554901 FKBP1BP68106 108 aa19.55■□□□□ 0.72
SPTLC2-203ENST00000554901 NECTIN1Q15223 517 aa19.55■□□□□ 0.72
SPTLC2-203ENST00000554901 RNF20Q5VTR2 975 aa19.55■□□□□ 0.72
SPTLC2-203ENST00000554901 PRAMEF18Q5VWM3 479 aa19.55■□□□□ 0.72
SPTLC2-203ENST00000554901 TRIM34Q9BYJ4 488 aa19.55■□□□□ 0.72
SPTLC2-203ENST00000554901 SSC5DA1L4H1 1573 aa19.54■□□□□ 0.72
SPTLC2-203ENST00000554901 CYP2D6P10635 497 aa19.54■□□□□ 0.72
SPTLC2-203ENST00000554901 C16orf86Q6ZW13 317 aa19.54■□□□□ 0.72
SPTLC2-203ENST00000554901 USP26Q9BXU7 913 aa19.54■□□□□ 0.72
SPTLC2-203ENST00000554901 ZNF341Q9BYN7 854 aa19.54■□□□□ 0.72
SPTLC2-203ENST00000554901 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.54■□□□□ 0.72
SPTLC2-203ENST00000554901 CYP2D7A0A087X1C5 515 aa19.53■□□□□ 0.72
SPTLC2-203ENST00000554901 UNCXA6NJT0 531 aa19.53■□□□□ 0.72
SPTLC2-203ENST00000554901 PDE4BQ07343 736 aa19.53■□□□□ 0.72
SPTLC2-203ENST00000554901 RNF41Q9H4P4 317 aaPredicted RBP19.53■□□□□ 0.72
SPTLC2-203ENST00000554901 LAMB1P07942 1786 aa19.53■□□□□ 0.72
SPTLC2-203ENST00000554901 FGRP09769 529 aa19.52■□□□□ 0.72
SPTLC2-203ENST00000554901 MAP3K11Q16584 847 aa19.52■□□□□ 0.72
SPTLC2-203ENST00000554901 TATDN1Q6P1N9 297 aa19.52■□□□□ 0.72
SPTLC2-203ENST00000554901 ZNF112Q9UJU3 913 aa19.52■□□□□ 0.72
SPTLC2-203ENST00000554901 SIPA1L1O43166 1804 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 CYP21A2P08686 494 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 MCCP23508 829 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 HSPA4P34932 840 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 SLC4A8Q2Y0W8 1093 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 DLK2Q6UY11 383 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 MIGA2Q7L4E1 593 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 ARMC9Q7Z3E5 817 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 STAG1Q8WVM7 1258 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 BACH2Q9BYV9 841 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 DNAJC18Q9H819 358 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 LAMA4Q16363 1823 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 ORC4O43929 436 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 CELF2O95319 508 aaKnown RBP19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 ZKSCAN1P17029 563 aaPredicted RBP19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 IREB2P48200 963 aaKnown RBP19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 CDK8P49336 464 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 TSGA10IPQ3SY00 556 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 AKNAD1Q5T1N1 836 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 CREB3L3Q68CJ9 461 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 C2orf69Q8N8R5 385 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 KLRG1Q96E93 195 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 DYNLL2Q96FJ2 89 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 CCDC17Q96LX7 622 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 GINM1Q9NU53 330 aa19.51■□□□□ 0.71
SPTLC2-203ENST00000554901 PHF20L1A8MW92 1017 aa19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 SLC27A2O14975 620 aa19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 USP2O75604 605 aaPredicted RBP19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 SHMT1P34896 483 aa19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 HAND2P61296 217 aa19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 EVX2Q03828 476 aa19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 CTDSPL2Q05D32 466 aa19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 MFSD6Q6ZSS7 791 aa19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 KCNB2Q92953 911 aa19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 CNNM2Q9H8M5 875 aa19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 UPF2Q9HAU5 1272 aaKnown RBP19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 MKNK2Q9HBH9 465 aa19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 GBA2Q9HCG7 927 aaPredicted RBP19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.5■□□□□ 0.71
SPTLC2-203ENST00000554901 PAPPA2Q9BXP8 1791 aa19.49■□□□□ 0.71
SPTLC2-203ENST00000554901 CTNND1O60716 968 aaKnown RBP19.49■□□□□ 0.71
SPTLC2-203ENST00000554901 SEC24BO95487 1268 aa19.49■□□□□ 0.71
SPTLC2-203ENST00000554901 CST9Q5W186 159 aa19.49■□□□□ 0.71
SPTLC2-203ENST00000554901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.49■□□□□ 0.71
SPTLC2-203ENST00000554901 NBPF3Q9H094 633 aa19.49■□□□□ 0.71
SPTLC2-203ENST00000554901 ZNF408Q9H9D4 720 aa19.49■□□□□ 0.71
SPTLC2-203ENST00000554901 TRPM7Q96QT4 1865 aa19.48■□□□□ 0.71
SPTLC2-203ENST00000554901 SMIM22K7EJ46 135 aa19.48■□□□□ 0.71
SPTLC2-203ENST00000554901 FMR1Q06787 632 aaKnown RBP eCLIP19.48■□□□□ 0.71
SPTLC2-203ENST00000554901 TTLL12Q14166 644 aaPredicted RBP19.48■□□□□ 0.71
SPTLC2-203ENST00000554901 KRT32Q14532 448 aa19.48■□□□□ 0.71
SPTLC2-203ENST00000554901 TBC1D10CQ8IV04 446 aa19.48■□□□□ 0.71
SPTLC2-203ENST00000554901 WRNIP1Q96S55 665 aa19.48■□□□□ 0.71
SPTLC2-203ENST00000554901 ANGEL1Q9UNK9 670 aaKnown RBP19.48■□□□□ 0.71
SPTLC2-203ENST00000554901 FAM196BA6NMK8 535 aa19.47■□□□□ 0.71
SPTLC2-203ENST00000554901 MAP3K9P80192 1104 aa19.47■□□□□ 0.71
SPTLC2-203ENST00000554901 TRDNQ13061 729 aa19.47■□□□□ 0.71
SPTLC2-203ENST00000554901 CERKLQ49MI3 558 aaPredicted RBP19.47■□□□□ 0.71
SPTLC2-203ENST00000554901 NOL9Q5SY16 702 aaKnown RBP19.47■□□□□ 0.71
SPTLC2-203ENST00000554901 ANKRD13AQ8IZ07 590 aa19.47■□□□□ 0.71
SPTLC2-203ENST00000554901 ZNF444Q8N0Y2 327 aaPredicted RBP19.47■□□□□ 0.71
SPTLC2-203ENST00000554901 SLC44A5Q8NCS7 719 aa19.47■□□□□ 0.71
SPTLC2-203ENST00000554901 KRT23Q9C075 422 aa19.47■□□□□ 0.71
SPTLC2-203ENST00000554901 RASA1P20936 1047 aa19.46■□□□□ 0.71
SPTLC2-203ENST00000554901 CAP2P40123 477 aa19.46■□□□□ 0.71
SPTLC2-203ENST00000554901 ANAPC15P60006 121 aa19.46■□□□□ 0.71
SPTLC2-203ENST00000554901 LDLRAD1Q5T700 205 aa19.46■□□□□ 0.71
SPTLC2-203ENST00000554901 TMEM88BA6NKF7 163 aa19.46■□□□□ 0.71
SPTLC2-203ENST00000554901 E7EWF7 191 aa19.46■□□□□ 0.71
SPTLC2-203ENST00000554901 ASNSP08243 561 aa19.46■□□□□ 0.71
SPTLC2-203ENST00000554901 ESR2Q92731 530 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms