RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 A6NNZ2 444 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 POTEB2H3BUK9 544 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 RPL17P18621 184 aaKnown RBP9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 TMPOP42166 694 aaKnown RBP9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 PSMC4P43686 418 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 SCNN1BP51168 640 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 LRRFIP1Q32MZ4 808 aaKnown RBP9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 ALDH1L2Q3SY69 923 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 TUBB8Q3ZCM7 444 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 EMC10Q5UCC4 262 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 VPS53Q5VIR6 699 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 ATF7IPQ6VMQ6 1270 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 B4GALNT4Q76KP1 1039 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 HDXQ7Z353 690 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 TRIML1Q8N9V2 468 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 VPS37AQ8NEZ2 397 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 ANKRD27Q96NW4 1050 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 IWS1Q96ST2 819 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 TSC22D3Q99576 134 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 USP26Q9BXU7 913 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 SLC30A1Q9Y6M5 507 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 TBC1D12O60347 775 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 EVI5O60447 810 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 CCDC166P0CW27 439 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 PPP4CP60510 307 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 TUBB4BP68371 445 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 LRMPQ12912 555 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 CNGA3Q16281 694 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 LONRF2Q1L5Z9 754 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 NUTM2DQ5VT03 806 aaPredicted RBP9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 USP33Q8TEY7 942 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 SPAG5Q96R06 1193 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 GINM1Q9NU53 330 aa9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 FBXO9Q9UK97 447 aaPredicted RBP9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 PAIP2BQ9ULR5 123 aaKnown RBP9.68□□□□□ -0.86
HNRNPC-211ENST00000554455 CD163L1Q9NR16 1453 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 MSH6P52701 1360 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 TMEM110-MUSTN1A8MSY1 372 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 ANKRD65E5RJM6 399 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 LUC7L3O95232 432 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 TRIM27P14373 513 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 FOSL1P15407 271 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 AARSP49588 968 aaKnown RBP eCLIP9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 POU5F1Q01860 360 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 BLMHQ13867 455 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 RCN1Q15293 331 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 TMEM132EQ6IEE7 984 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 CRELD2Q6UXH1 353 aaPredicted RBP9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 RSRC2Q7L4I2 434 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 ZBTB8BQ8NAP8 495 aaPredicted RBP9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 CACTINQ8WUQ7 758 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.67□□□□□ -0.862e-8■■■□□ 14.8
HNRNPC-211ENST00000554455 LRRCC1Q9C099 1032 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 BICC1Q9H694 974 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 VIPAS39Q9H9C1 493 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 ATXN10Q9UBB4 475 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 TRIM35Q9UPQ4 493 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 TMEM131LA2VDJ0 1609 aa9.67□□□□□ -0.86
HNRNPC-211ENST00000554455 PIK3R4Q99570 1358 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 DLC1Q96QB1 1528 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 ATP9BO43861 1147 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 TUBBP07437 444 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 RPSAP08865 295 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 MYCLP1P12525 358 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 ATP5JP18859 108 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 CNGA1P29973 690 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 GNAQP50148 359 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 ZNF75DP51815 510 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 EXOSC9Q06265 439 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 KCNA1Q09470 495 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 CCDC152Q4G0S7 254 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 CREB3L3Q68CJ9 461 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 BICDL1Q6ZP65 573 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 LRRC43Q8N309 656 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 TTC30BQ8N4P2 665 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 NAP1L3Q99457 506 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 BCL2L13Q9BXK5 485 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 OXCT2Q9BYC2 517 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 TANGO6Q9C0B7 1094 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 SPO11Q9Y5K1 396 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 PREX1Q8TCU6 1659 aa9.66□□□□□ -0.86
HNRNPC-211ENST00000554455 KDM4FA0A1W2PPD8 638 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 NUTM2FA1L443 756 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 MEFVO15553 781 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 ZSCAN12O43309 604 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 ZBED4O75132 1171 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 PEX14O75381 377 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 TMCC1O94876 653 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 NPTXRO95502 500 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 GNAT1P11488 350 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 ALOX15P16050 662 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 ENPP1P22413 925 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 OXCT1P55809 520 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 ARPC4P59998 168 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 CTAG1AP78358 180 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 ACTN3Q08043 901 aaPredicted RBP9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 SNW1Q13573 536 aaKnown RBP9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 GNPTABQ3T906 1256 aa9.65□□□□□ -0.86
HNRNPC-211ENST00000554455 CCDC40Q4G0X9 1142 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms