RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 ZBTB42B2RXF5 422 aa8.76□□□□□ -1.01
KTN1-213ENST00000554306 PERM1Q5SV97 790 aa8.76□□□□□ -1.01
KTN1-213ENST00000554306 AEBP1Q8IUX7 1158 aa8.76□□□□□ -1.01
KTN1-213ENST00000554306 CLP1Q92989 425 aaKnown RBP8.76□□□□□ -1.01
KTN1-213ENST00000554306 YTHDC1Q96MU7 727 aaKnown RBP8.76□□□□□ -1.01
KTN1-213ENST00000554306 FAM13BQ9NYF5 915 aa8.76□□□□□ -1.01
KTN1-213ENST00000554306 TLR7Q9NYK1 1049 aaKnown RBP8.76□□□□□ -1.01
KTN1-213ENST00000554306 USP35Q9P2H5 1018 aa8.76□□□□□ -1.01
KTN1-213ENST00000554306 KDRP35968 1356 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 APAF1O14727 1248 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 HNRNPUQ00839 825 aaKnown RBP eCLIP8.75□□□□□ -1.01
KTN1-213ENST00000554306 NRG1Q02297 640 aaPredicted RBP8.75□□□□□ -1.01
KTN1-213ENST00000554306 PLEKHO1Q53GL0 409 aaPredicted RBP8.75□□□□□ -1.01
KTN1-213ENST00000554306 MSL1Q68DK7 614 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 ILDR2Q71H61 639 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 FMR1NBQ8N0W7 255 aaPredicted RBP8.75□□□□□ -1.01
KTN1-213ENST00000554306 TCP11L2Q8N4U5 519 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 DTWD1Q8N5C7 304 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 SAP130Q9H0E3 1048 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 C1orf115Q9H7X2 142 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 USP20Q9Y2K6 914 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 THRAP3Q9Y2W1 955 aaKnown RBP8.75□□□□□ -1.01
KTN1-213ENST00000554306 KCNMB2Q9Y691 235 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 DLG5Q8TDM6 1919 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 WNK3Q9BYP7 1800 aa8.75□□□□□ -1.01
KTN1-213ENST00000554306 PSAPP07602 524 aa8.74□□□□□ -1.01
KTN1-213ENST00000554306 IL2RBP14784 551 aa8.74□□□□□ -1.01
KTN1-213ENST00000554306 PLAURQ03405 335 aa8.74□□□□□ -1.01
KTN1-213ENST00000554306 VPS72Q15906 364 aa8.74□□□□□ -1.01
KTN1-213ENST00000554306 AMOTQ4VCS5 1084 aa8.74□□□□□ -1.01
KTN1-213ENST00000554306 ZNF772Q68DY9 489 aaPredicted RBP8.74□□□□□ -1.01
KTN1-213ENST00000554306 ETFBKMTQ8IXQ9 262 aa8.74□□□□□ -1.01
KTN1-213ENST00000554306 DMRTC2Q8IXT2 367 aaPredicted RBP8.74□□□□□ -1.01
KTN1-213ENST00000554306 NGEFQ8N5V2 710 aa8.74□□□□□ -1.01
KTN1-213ENST00000554306 LENG1Q96BZ8 264 aaPredicted RBP8.74□□□□□ -1.01
KTN1-213ENST00000554306 PLEKHF1Q96S99 279 aa8.74□□□□□ -1.01
KTN1-213ENST00000554306 MKNK1Q9BUB5 465 aa8.74□□□□□ -1.01
KTN1-213ENST00000554306 TRPC5Q9UL62 973 aaPredicted RBP8.74□□□□□ -1.01
KTN1-213ENST00000554306 SPG7Q9UQ90 795 aa8.74□□□□□ -1.01
KTN1-213ENST00000554306 BCL9LQ86UU0 1499 aa8.74□□□□□ -1.01
KTN1-213ENST00000554306 NCAPD2Q15021 1401 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 SELPP16109 830 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 SOX18P35713 384 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 RIPK4P57078 832 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 MLLT1Q03111 559 aaPredicted RBP8.73□□□□□ -1.01
KTN1-213ENST00000554306 LMOD3Q0VAK6 560 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 ADGRE1Q14246 886 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 NFE2L2Q16236 605 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 GRIK5Q16478 980 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 SEMA6BQ9H3T3 888 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 TPSG1Q9NRR2 321 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 SPATA31A1Q5TZJ5 1347 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 SPATA31A5Q5VU36 1347 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 SPATA31A7Q8IWB4 1347 aa8.73□□□□□ -1.01
KTN1-213ENST00000554306 VIRMAQ69YN4 1812 aaKnown RBP8.73□□□□□ -1.01
KTN1-213ENST00000554306 HOXD8P13378 290 aaPredicted RBP8.72□□□□□ -1.01
KTN1-213ENST00000554306 EIF2AK2P19525 551 aaKnown RBP8.72□□□□□ -1.01
KTN1-213ENST00000554306 TMPOP42166 694 aaKnown RBP8.72□□□□□ -1.01
KTN1-213ENST00000554306 RSPO4Q2I0M5 234 aaPredicted RBP8.72□□□□□ -1.01
KTN1-213ENST00000554306 C1orf141Q5JVX7 400 aa8.72□□□□□ -1.01
KTN1-213ENST00000554306 WFDC8Q8IUA0 241 aa8.72□□□□□ -1.01
KTN1-213ENST00000554306 ZCRB1Q8TBF4 217 aaKnown RBP8.72□□□□□ -1.01
KTN1-213ENST00000554306 PIK3R5Q8WYR1 880 aa8.72□□□□□ -1.01
KTN1-213ENST00000554306 PHACTR3Q96KR7 559 aa8.72□□□□□ -1.01
KTN1-213ENST00000554306 SMG9Q9H0W8 520 aaKnown RBP8.72□□□□□ -1.01
KTN1-213ENST00000554306 RBSNQ9H1K0 784 aa8.72□□□□□ -1.01
KTN1-213ENST00000554306 PLEKHG2Q9H7P9 1386 aa8.72□□□□□ -1.01
KTN1-213ENST00000554306 PKD1L3Q7Z443 1732 aa8.71□□□□□ -1.01
KTN1-213ENST00000554306 EXOC5O00471 708 aa8.71□□□□□ -1.02
KTN1-213ENST00000554306 TNFRSF10BO14763 440 aa8.71□□□□□ -1.02
KTN1-213ENST00000554306 MMP20O60882 483 aa8.71□□□□□ -1.02
KTN1-213ENST00000554306 GHRHP01286 108 aa8.71□□□□□ -1.02
KTN1-213ENST00000554306 MBTPS1Q14703 1052 aa8.71□□□□□ -1.02
KTN1-213ENST00000554306 NAA30Q147X3 362 aaPredicted RBP8.71□□□□□ -1.02
KTN1-213ENST00000554306 MTHFSDQ2M296 383 aaKnown RBP8.71□□□□□ -1.02
KTN1-213ENST00000554306 NKAPLQ5M9Q1 402 aa8.71□□□□□ -1.02
KTN1-213ENST00000554306 ZNF530Q6P9A1 599 aaPredicted RBP8.71□□□□□ -1.02
KTN1-213ENST00000554306 HFE2Q6ZVN8 426 aa8.71□□□□□ -1.02
KTN1-213ENST00000554306 TXNRD3Q86VQ6 643 aa8.71□□□□□ -1.02
KTN1-213ENST00000554306 RTF1Q92541 710 aaKnown RBP8.71□□□□□ -1.02
KTN1-213ENST00000554306 RRP7AQ9Y3A4 280 aaKnown RBP8.71□□□□□ -1.02
KTN1-213ENST00000554306 ATRNO75882 1429 aa8.71□□□□□ -1.02
KTN1-213ENST00000554306 MEGF6O75095 1541 aa8.7□□□□□ -1.02
KTN1-213ENST00000554306 LOC102724428A0A0B4J2F2 783 aa8.7□□□□□ -1.02
KTN1-213ENST00000554306 GNAT3A8MTJ3 354 aa8.7□□□□□ -1.02
KTN1-213ENST00000554306 HTATSF1O43719 755 aaKnown RBP8.7□□□□□ -1.02
KTN1-213ENST00000554306 HSP90AB1P08238 724 aaKnown RBP8.7□□□□□ -1.02
KTN1-213ENST00000554306 SIK1P57059 783 aa8.7□□□□□ -1.02
KTN1-213ENST00000554306 CALD1Q05682 793 aaKnown RBP8.7□□□□□ -1.02
KTN1-213ENST00000554306 AKAP4Q5JQC9 854 aa8.7□□□□□ -1.02
KTN1-213ENST00000554306 CAPN12Q6ZSI9 719 aa8.7□□□□□ -1.02
KTN1-213ENST00000554306 FBXO11Q86XK2 927 aa8.7□□□□□ -1.02
KTN1-213ENST00000554306 IFNL2Q8IZJ0 200 aa8.7□□□□□ -1.02
KTN1-213ENST00000554306 STIM2Q9P246 746 aa8.7□□□□□ -1.02
KTN1-213ENST00000554306 FNDC3AQ9Y2H6 1198 aaKnown RBP8.7□□□□□ -1.02
KTN1-213ENST00000554306 OVOS2A0A0G2JMS6 1433 aa8.7□□□□□ -1.02
KTN1-213ENST00000554306 DDB1Q16531 1140 aa8.69□□□□□ -1.02
KTN1-213ENST00000554306 CCDC27Q2M243 656 aa8.69□□□□□ -1.02
KTN1-213ENST00000554306 SHISA2Q6UWI4 295 aa8.69□□□□□ -1.02
KTN1-213ENST00000554306 DDX54Q8TDD1 881 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms