RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 AGTPBP1Q9UPW5 1226 aa14.35□□□□□ -0.11
TUBB3-204ENST00000554116 CDK5RAP2Q96SN8 1893 aa14.34□□□□□ -0.11
TUBB3-204ENST00000554116 MYO5AQ9Y4I1 1855 aaKnown RBP14.34□□□□□ -0.11
TUBB3-204ENST00000554116 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
TUBB3-204ENST00000554116 JAG1P78504 1218 aa14.34□□□□□ -0.11
TUBB3-204ENST00000554116 TBC1D9Q6ZT07 1266 aa14.34□□□□□ -0.11
TUBB3-204ENST00000554116 ZSCAN29Q8IWY8 852 aaPredicted RBP14.34□□□□□ -0.11
TUBB3-204ENST00000554116 ANKRD13CQ8N6S4 541 aa14.34□□□□□ -0.11
TUBB3-204ENST00000554116 DIS3LQ8TF46 1054 aaKnown RBP14.34□□□□□ -0.11
TUBB3-204ENST00000554116 NSUN4Q96CB9 384 aaKnown RBP14.34□□□□□ -0.11
TUBB3-204ENST00000554116 DEFB118Q96PH6 123 aa14.34□□□□□ -0.11
TUBB3-204ENST00000554116 HMG20BQ9P0W2 317 aa14.34□□□□□ -0.11
TUBB3-204ENST00000554116 PRUNE2Q8WUY3 3088 aa14.34□□□□□ -0.11
TUBB3-204ENST00000554116 TNPO2O14787 897 aaKnown RBP14.33□□□□□ -0.12
TUBB3-204ENST00000554116 CAPN2P17655 700 aa14.33□□□□□ -0.12
TUBB3-204ENST00000554116 TRIM32Q13049 653 aa14.33□□□□□ -0.12
TUBB3-204ENST00000554116 MTX1Q13505 466 aa14.33□□□□□ -0.12
TUBB3-204ENST00000554116 DZIP1Q86YF9 867 aaKnown RBP14.33□□□□□ -0.12
TUBB3-204ENST00000554116 ZGPATQ8N5A5 531 aaKnown RBP14.33□□□□□ -0.12
TUBB3-204ENST00000554116 TNNQ9UQP3 1299 aa14.33□□□□□ -0.12
TUBB3-204ENST00000554116 EVI5O60447 810 aa14.32□□□□□ -0.12
TUBB3-204ENST00000554116 PEX10O60683 326 aa14.32□□□□□ -0.12
TUBB3-204ENST00000554116 SPP2Q13103 211 aa14.32□□□□□ -0.12
TUBB3-204ENST00000554116 FAM110CQ1W6H9 321 aa14.32□□□□□ -0.12
TUBB3-204ENST00000554116 SHROOM1Q2M3G4 852 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-204ENST00000554116 POTEEQ6S8J3 1075 aa14.32□□□□□ -0.12
TUBB3-204ENST00000554116 LRCH3Q96II8 777 aa14.32□□□□□ -0.12
TUBB3-204ENST00000554116 PAWRQ96IZ0 340 aaKnown RBP14.32□□□□□ -0.12
TUBB3-204ENST00000554116 STAP2Q9UGK3 403 aa14.32□□□□□ -0.12
TUBB3-204ENST00000554116 COL2A1P02458 1487 aaPredicted RBP14.31□□□□□ -0.12
TUBB3-204ENST00000554116 SPTBN5Q9NRC6 3674 aaKnown RBP14.31□□□□□ -0.12
TUBB3-204ENST00000554116 TFRCP02786 760 aaKnown RBP14.31□□□□□ -0.12
TUBB3-204ENST00000554116 RARSP54136 660 aaKnown RBP14.31□□□□□ -0.12
TUBB3-204ENST00000554116 ERICH6Q7L0X2 663 aa14.31□□□□□ -0.12
TUBB3-204ENST00000554116 PROCA1Q8NCQ7 364 aaPredicted RBP14.31□□□□□ -0.12
TUBB3-204ENST00000554116 SMCR8Q8TEV9 937 aaPredicted RBP14.31□□□□□ -0.12
TUBB3-204ENST00000554116 SRGAP3O43295 1099 aa14.3□□□□□ -0.12
TUBB3-204ENST00000554116 CT47B1P0C2W7 299 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-204ENST00000554116 ARID4AP29374 1257 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-204ENST00000554116 CAP2P40123 477 aa14.3□□□□□ -0.12
TUBB3-204ENST00000554116 MCAMP43121 646 aa14.3□□□□□ -0.12
TUBB3-204ENST00000554116 HMGCS2P54868 508 aa14.3□□□□□ -0.12
TUBB3-204ENST00000554116 SH3D19Q5HYK7 790 aa14.3□□□□□ -0.12
TUBB3-204ENST00000554116 SPTY2D1Q68D10 685 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-204ENST00000554116 ZNF280CQ8ND82 737 aa14.3□□□□□ -0.12
TUBB3-204ENST00000554116 GDF15Q99988 308 aa14.3□□□□□ -0.12
TUBB3-204ENST00000554116 API5Q9BZZ5 524 aaKnown RBP14.3□□□□□ -0.12
TUBB3-204ENST00000554116 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.3□□□□□ -0.128e-7■■■■□ 24.2
TUBB3-204ENST00000554116 OSBPL5Q9H0X9 879 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-204ENST00000554116 ASCC2Q9H1I8 757 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-204ENST00000554116 DNAJC18Q9H819 358 aa14.3□□□□□ -0.12
TUBB3-204ENST00000554116 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.3□□□□□ -0.12
TUBB3-204ENST00000554116 CDH23Q9H251 3354 aa14.3□□□□□ -0.12
TUBB3-204ENST00000554116 FOCADQ5VW36 1801 aa14.29□□□□□ -0.12
TUBB3-204ENST00000554116 GPR153Q6NV75 609 aa14.29□□□□□ -0.12
TUBB3-204ENST00000554116 SLF2Q8IX21 1173 aa14.29□□□□□ -0.12
TUBB3-204ENST00000554116 SPATA5Q8NB90 893 aa14.29□□□□□ -0.12
TUBB3-204ENST00000554116 DDX60LQ5H9U9 1706 aaKnown RBP14.29□□□□□ -0.12
TUBB3-204ENST00000554116 PNMA6EA0A0J9YXQ4 647 aa14.28□□□□□ -0.12
TUBB3-204ENST00000554116 MVPQ14764 893 aaKnown RBP14.28□□□□□ -0.12
TUBB3-204ENST00000554116 ADGRA1Q86SQ6 560 aa14.28□□□□□ -0.12
TUBB3-204ENST00000554116 METTL16Q86W50 562 aaKnown RBP14.28□□□□□ -0.12
TUBB3-204ENST00000554116 SH3RF3Q8TEJ3 882 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-204ENST00000554116 COA7Q96BR5 231 aa14.28□□□□□ -0.12
TUBB3-204ENST00000554116 NEUROD6Q96NK8 337 aa14.28□□□□□ -0.12
TUBB3-204ENST00000554116 TXNRD2Q9NNW7 524 aa14.28□□□□□ -0.12
TUBB3-204ENST00000554116 MORF4L1Q9UBU8 362 aa14.28□□□□□ -0.12
TUBB3-204ENST00000554116 GCLCP48506 637 aaPredicted RBP14.27□□□□□ -0.13
TUBB3-204ENST00000554116 HNRNPUQ00839 825 aaKnown RBP eCLIP14.27□□□□□ -0.13
TUBB3-204ENST00000554116 MAP3K21Q5TCX8 1036 aa14.27□□□□□ -0.13
TUBB3-204ENST00000554116 TRIB2Q92519 343 aa14.27□□□□□ -0.13
TUBB3-204ENST00000554116 ARHGAP45Q92619 1136 aa14.27□□□□□ -0.13
TUBB3-204ENST00000554116 P2RX7Q99572 595 aaKnown RBP14.27□□□□□ -0.13
TUBB3-204ENST00000554116 WDR18Q9BV38 432 aa14.27□□□□□ -0.13
TUBB3-204ENST00000554116 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.13
TUBB3-204ENST00000554116 AKAP2Q9Y2D5 859 aa14.27□□□□□ -0.13
TUBB3-204ENST00000554116 RPTORQ8N122 1335 aa14.26□□□□□ -0.13
TUBB3-204ENST00000554116 USP17L5A8MUK1 530 aa14.26□□□□□ -0.13
TUBB3-204ENST00000554116 MAP4K4O95819 1239 aaPredicted RBP14.26□□□□□ -0.13
TUBB3-204ENST00000554116 HMGCRP04035 888 aa14.26□□□□□ -0.13
TUBB3-204ENST00000554116 BMP8BP34820 402 aa14.26□□□□□ -0.13
TUBB3-204ENST00000554116 NECAB2Q7Z6G3 386 aa14.26□□□□□ -0.13
TUBB3-204ENST00000554116 USP6NLQ92738 828 aa14.26□□□□□ -0.13
TUBB3-204ENST00000554116 PNMA3Q9UL41 463 aa14.26□□□□□ -0.13
TUBB3-204ENST00000554116 PFASO15067 1338 aa14.25□□□□□ -0.13
TUBB3-204ENST00000554116 LDHCP07864 332 aa14.25□□□□□ -0.13
TUBB3-204ENST00000554116 GNAI3P08754 354 aa14.25□□□□□ -0.13
TUBB3-204ENST00000554116 HOXA7P31268 230 aaPredicted RBP14.25□□□□□ -0.13
TUBB3-204ENST00000554116 PPP4CP60510 307 aa14.25□□□□□ -0.13
TUBB3-204ENST00000554116 Q3C1V9 767 aa14.25□□□□□ -0.13
TUBB3-204ENST00000554116 TEX11Q8IYF3 940 aa14.25□□□□□ -0.13
TUBB3-204ENST00000554116 ANKLE1Q8NAG6 615 aa14.25□□□□□ -0.13
TUBB3-204ENST00000554116 SNRKQ9NRH2 765 aa14.25□□□□□ -0.13
TUBB3-204ENST00000554116 RAI14Q9P0K7 980 aa14.25□□□□□ -0.13
TUBB3-204ENST00000554116 RBPJLQ9UBG7 517 aa14.25□□□□□ -0.13
TUBB3-204ENST00000554116 OGDHLQ9ULD0 1010 aa14.25□□□□□ -0.13
TUBB3-204ENST00000554116 MAST2Q6P0Q8 1798 aa14.24□□□□□ -0.13
TUBB3-204ENST00000554116 CYP2E1P05181 493 aaPredicted RBP14.24□□□□□ -0.13
TUBB3-204ENST00000554116 TRIM27P14373 513 aa14.24□□□□□ -0.13
TUBB3-204ENST00000554116 BACE1P56817 501 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms