RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 TBC1D10BQ4KMP7 808 aaPredicted RBP12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 STOX1Q6ZVD7 989 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 TBC1D10CQ8IV04 446 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 CRACR2BQ8N4Y2 399 aaPredicted RBP12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 TMEM87BQ96K49 555 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 ZSCAN31Q96LW9 406 aaPredicted RBP12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 PI4KBQ9UBF8 816 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 SWAP70Q9UH65 585 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 PCDHAC2Q9Y5I4 1007 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 SCN9AQ15858 1988 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 WDR19Q8NEZ3 1342 aa12.34□□□□□ -0.43
TMEM55B-205ENST00000554028 MYH2Q9UKX2 1941 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 CLRN2A0PK11 232 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 B4E1Z4 1266 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 TCP10L2B9ZVM9 353 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 PRC1O43663 620 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 ORC4O43929 436 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 RANBP6O60518 1105 aaKnown RBP12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 CYP2D6P10635 497 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 CPA1P15085 419 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 CACNB3P54284 484 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 NFIAQ12857 509 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 CCDC178Q5BJE1 867 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 FAM83AQ86UY5 434 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 IQCA1Q86XH1 822 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 FOXP4Q8IVH2 680 aaPredicted RBP12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 FAM151AQ8WW52 585 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 CHMP4CQ96CF2 233 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 UBAC1Q9BSL1 405 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 MTA3Q9BTC8 594 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 TBC1D2Q9BYX2 928 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 DDX4Q9NQI0 724 aaKnown RBP12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 ADARB2Q9NS39 739 aaKnown RBP12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
TMEM55B-205ENST00000554028 TSPY2A6NKD2 308 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 IFIT3O14879 490 aaKnown RBP12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 KDM4AO75164 1064 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 FGRP09769 529 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 PLCD1P51178 756 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 AK2P54819 239 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 EXOSC10Q01780 885 aaKnown RBP12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 SLC4A8Q2Y0W8 1093 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 NBPF9Q3BBW0 867 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 Q6ZUG5 572 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 SAMD7Q7Z3H4 446 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 MB21D2Q8IYB1 491 aaPredicted RBP12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 TMTC2Q8N394 836 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 ZBED3Q96IU2 234 aaPredicted RBP12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 TTC14Q96N46 770 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 NBPF3Q9H094 633 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 ZSWIM5Q9P217 1185 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 SERPINB13Q9UIV8 391 aa12.32□□□□□ -0.44
TMEM55B-205ENST00000554028 IQCA1LA6NCM1 817 aa12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 GLTPD2A6NH11 291 aa12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 CDK8P49336 464 aa12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 SYNE3Q6ZMZ3 975 aa12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 C16orf86Q6ZW13 317 aa12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 NOL8Q76FK4 1167 aaKnown RBP12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 APOBEC3FQ8IUX4 373 aaKnown RBP12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 HOOK2Q96ED9 719 aa12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 DYNLL2Q96FJ2 89 aa12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 EHD4Q9H223 541 aa12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 HACL1Q9UJ83 578 aa12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 NEDD4P46934 1319 aa12.31□□□□□ -0.44
TMEM55B-205ENST00000554028 ROBO3Q96MS0 1386 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 PSME4Q14997 1843 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 SHTN1A0MZ66 631 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 PRDM1O75626 825 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 TSPY3P0CV98 308 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 TSPY8P0CW00 308 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 EPS15P42566 896 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 TFAP4Q01664 338 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 TMEM67Q5HYA8 995 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 PPP4R3BQ5MIZ7 849 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 NFXL1Q6ZNB6 911 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 CHST3Q7LGC8 479 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 FBXL16Q8N461 479 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 BRF1Q92994 677 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 CCDC17Q96LX7 622 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 TCEANC2Q96MN5 208 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 CSRNP1Q96S65 589 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 INCENPQ9NQS7 918 aa12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 ANGEL1Q9UNK9 670 aaKnown RBP12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.3□□□□□ -0.44
TMEM55B-205ENST00000554028 CCDC69A6NI79 296 aa12.29□□□□□ -0.44
TMEM55B-205ENST00000554028 WTAPQ15007 396 aa12.29□□□□□ -0.44
TMEM55B-205ENST00000554028 USP50Q70EL3 339 aaPredicted RBP12.29□□□□□ -0.44
TMEM55B-205ENST00000554028 CYB5R4Q7L1T6 521 aa12.29□□□□□ -0.44
TMEM55B-205ENST00000554028 ZFPM1Q8IX07 1006 aa12.29□□□□□ -0.44
TMEM55B-205ENST00000554028 DCPSQ96C86 337 aaKnown RBP12.29□□□□□ -0.44
TMEM55B-205ENST00000554028 TMX3Q96JJ7 454 aa12.29□□□□□ -0.44
TMEM55B-205ENST00000554028 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
TMEM55B-205ENST00000554028 ZSCAN10Q96SZ4 725 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms