RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 CRACR2BQ8N4Y2 399 aaPredicted RBP16.72■□□□□ 0.27
PRKCH-206ENST00000553830 FAM151AQ8WW52 585 aa16.72■□□□□ 0.27
PRKCH-206ENST00000553830 TCEANC2Q96MN5 208 aa16.72■□□□□ 0.27
PRKCH-206ENST00000553830 NEK1Q96PY6 1258 aa16.72■□□□□ 0.27
PRKCH-206ENST00000553830 TAF1DQ9H5J8 278 aaPredicted RBP16.72■□□□□ 0.27
PRKCH-206ENST00000553830 CLEC11AQ9Y240 323 aa16.72■□□□□ 0.27
PRKCH-206ENST00000553830 POTECB2RU33 542 aa16.71■□□□□ 0.27
PRKCH-206ENST00000553830 B4E1Z4 1266 aa16.71■□□□□ 0.27
PRKCH-206ENST00000553830 PSMA5P28066 241 aa16.71■□□□□ 0.27
PRKCH-206ENST00000553830 PRAMEF18Q5VWM3 479 aa16.71■□□□□ 0.27
PRKCH-206ENST00000553830 BLOC1S2Q6QNY1 142 aa16.71■□□□□ 0.27
PRKCH-206ENST00000553830 NOL8Q76FK4 1167 aaKnown RBP16.71■□□□□ 0.27
PRKCH-206ENST00000553830 CHST3Q7LGC8 479 aa16.71■□□□□ 0.27
PRKCH-206ENST00000553830 APOBEC3FQ8IUX4 373 aaKnown RBP16.71■□□□□ 0.27
PRKCH-206ENST00000553830 NCOA7Q8NI08 942 aa16.71■□□□□ 0.27
PRKCH-206ENST00000553830 STAG1Q8WVM7 1258 aa16.71■□□□□ 0.27
PRKCH-206ENST00000553830 DCPSQ96C86 337 aaKnown RBP16.71■□□□□ 0.27
PRKCH-206ENST00000553830 CSRNP1Q96S65 589 aa16.71■□□□□ 0.27
PRKCH-206ENST00000553830 RNF41Q9H4P4 317 aaPredicted RBP16.71■□□□□ 0.27
PRKCH-206ENST00000553830 ANAPC4Q9UJX5 808 aa16.71■□□□□ 0.27
PRKCH-206ENST00000553830 RANBP6O60518 1105 aaKnown RBP16.7■□□□□ 0.26
PRKCH-206ENST00000553830 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
PRKCH-206ENST00000553830 NEK4P51957 841 aa16.7■□□□□ 0.26
PRKCH-206ENST00000553830 PDE4BQ07343 736 aa16.7■□□□□ 0.26
PRKCH-206ENST00000553830 RABEP1Q15276 862 aa16.7■□□□□ 0.26
PRKCH-206ENST00000553830 TSGA10IPQ3SY00 556 aa16.7■□□□□ 0.26
PRKCH-206ENST00000553830 FKBP1CQ5VVH2 108 aa16.7■□□□□ 0.26
PRKCH-206ENST00000553830 USP50Q70EL3 339 aaPredicted RBP16.7■□□□□ 0.26
PRKCH-206ENST00000553830 NKX2-3Q8TAU0 364 aa16.7■□□□□ 0.26
PRKCH-206ENST00000553830 LRRC2Q9BYS8 371 aa16.7■□□□□ 0.26
PRKCH-206ENST00000553830 DHX36Q9H2U1 1008 aaKnown RBP16.7■□□□□ 0.26
PRKCH-206ENST00000553830 MKNK2Q9HBH9 465 aa16.7■□□□□ 0.26
PRKCH-206ENST00000553830 NMRK2Q9NPI5 230 aa16.7■□□□□ 0.26
PRKCH-206ENST00000553830 CYP46A1Q9Y6A2 500 aa16.7■□□□□ 0.26
PRKCH-206ENST00000553830 ROBO3Q96MS0 1386 aa16.69■□□□□ 0.26
PRKCH-206ENST00000553830 ADM5C9JUS6 153 aa16.69■□□□□ 0.26
PRKCH-206ENST00000553830 KDM4AO75164 1064 aa16.69■□□□□ 0.26
PRKCH-206ENST00000553830 CDK8P49336 464 aa16.69■□□□□ 0.26
PRKCH-206ENST00000553830 FAM47AQ5JRC9 791 aa16.69■□□□□ 0.26
PRKCH-206ENST00000553830 FAM83AQ86UY5 434 aa16.69■□□□□ 0.26
PRKCH-206ENST00000553830 DEFB129Q9H1M3 183 aa16.69■□□□□ 0.26
PRKCH-206ENST00000553830 SERPINB13Q9UIV8 391 aa16.69■□□□□ 0.26
PRKCH-206ENST00000553830 COL2A1P02458 1487 aaPredicted RBP16.68■□□□□ 0.26
PRKCH-206ENST00000553830 POTEIP0CG38 1075 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 POTEJP0CG39 1038 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 RPS6KB1P23443 525 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 ANP32AP39687 249 aaKnown RBP16.68■□□□□ 0.26
PRKCH-206ENST00000553830 FGD1P98174 961 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 DLK2Q6UY11 383 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 C16orf86Q6ZW13 317 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 CYB5R4Q7L1T6 521 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 MIGA2Q7L4E1 593 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 SULF1Q8IWU6 871 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 KRT23Q9C075 422 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 CNNM2Q9H8M5 875 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 PDRG1Q9NUG6 133 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 PI4KBQ9UBF8 816 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.68■□□□□ 0.26
PRKCH-206ENST00000553830 ATAD5Q96QE3 1844 aa16.68■□□□□ 0.26
PRKCH-206ENST00000553830 ATRNL1Q5VV63 1379 aa16.67■□□□□ 0.26
PRKCH-206ENST00000553830 PRC1O43663 620 aa16.67■□□□□ 0.26
PRKCH-206ENST00000553830 VEGFAP15692 232 aaPredicted RBP16.67■□□□□ 0.26
PRKCH-206ENST00000553830 RUFY3Q7L099 469 aa16.67■□□□□ 0.26
PRKCH-206ENST00000553830 KRT26Q7Z3Y9 468 aa16.67■□□□□ 0.26
PRKCH-206ENST00000553830 MB21D2Q8IYB1 491 aaPredicted RBP16.67■□□□□ 0.26
PRKCH-206ENST00000553830 ZNF444Q8N0Y2 327 aaPredicted RBP16.67■□□□□ 0.26
PRKCH-206ENST00000553830 ESR2Q92731 530 aa16.67■□□□□ 0.26
PRKCH-206ENST00000553830 ZKSCAN3Q9BRR0 538 aa16.67■□□□□ 0.26
PRKCH-206ENST00000553830 LARP6Q9BRS8 491 aaKnown RBP16.67■□□□□ 0.26
PRKCH-206ENST00000553830 TM6SF1Q9BZW5 370 aa16.67■□□□□ 0.26
PRKCH-206ENST00000553830 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.67■□□□□ 0.26
PRKCH-206ENST00000553830 ZSWIM6Q9HCJ5 1215 aa16.67■□□□□ 0.26
PRKCH-206ENST00000553830 UTRNP46939 3433 aa16.67■□□□□ 0.26
PRKCH-206ENST00000553830 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
PRKCH-206ENST00000553830 MPHOSPH10O00566 681 aaKnown RBP16.66■□□□□ 0.26
PRKCH-206ENST00000553830 NBPF12Q5TAG4 269 aaPredicted RBP16.66■□□□□ 0.26
PRKCH-206ENST00000553830 USP48Q86UV5 1035 aa16.66■□□□□ 0.26
PRKCH-206ENST00000553830 PNMA8AQ86V59 439 aaPredicted RBP16.66■□□□□ 0.26
PRKCH-206ENST00000553830 EHD4Q9H223 541 aa16.66■□□□□ 0.26
PRKCH-206ENST00000553830 DNAJC18Q9H819 358 aa16.66■□□□□ 0.26
PRKCH-206ENST00000553830 ZNF287Q9HBT7 754 aa16.66■□□□□ 0.26
PRKCH-206ENST00000553830 PITPNM2Q9BZ72 1349 aa16.66■□□□□ 0.26
PRKCH-206ENST00000553830 ORC4O43929 436 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 ST18O60284 1047 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 HMGB1P09429 215 aaKnown RBP16.65■□□□□ 0.26
PRKCH-206ENST00000553830 TSPY3P0CV98 308 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 TSPY8P0CW00 308 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 RASA1P20936 1047 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 MCM5P33992 734 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 SHMT1P34896 483 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 ANTXR2P58335 489 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 TFAP4Q01664 338 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 GABPAQ06546 454 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 Q6ZUG5 572 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 DHX32Q7L7V1 743 aaKnown RBP16.65■□□□□ 0.26
PRKCH-206ENST00000553830 FOXP4Q8IVH2 680 aaPredicted RBP16.65■□□□□ 0.26
PRKCH-206ENST00000553830 IL17RAQ96F46 866 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 TEPSINQ96N21 525 aa16.65■□□□□ 0.26
PRKCH-206ENST00000553830 GLIS2Q9BZE0 524 aaPredicted RBP16.65■□□□□ 0.26
PRKCH-206ENST00000553830 GPHNQ9NQX3 736 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms