RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 PTPN18Q99952 460 aa24.7■■□□□ 1.54
XRCC3-205ENST00000553807 PI4KBQ9UBF8 816 aa24.7■■□□□ 1.54
XRCC3-205ENST00000553807 MYH7P12883 1935 aa24.7■■□□□ 1.54
XRCC3-205ENST00000553807 TTC41PQ6P2S7 1318 aa24.69■■□□□ 1.54
XRCC3-205ENST00000553807 TESPA1A2RU30 521 aaPredicted RBP24.69■■□□□ 1.54
XRCC3-205ENST00000553807 CHGBP05060 677 aa24.69■■□□□ 1.54
XRCC3-205ENST00000553807 CRACR2BQ8N4Y2 399 aaPredicted RBP24.69■■□□□ 1.54
XRCC3-205ENST00000553807 TRIM34Q9BYJ4 488 aa24.69■■□□□ 1.54
XRCC3-205ENST00000553807 RWDD1Q9H446 243 aaPredicted RBP24.69■■□□□ 1.54
XRCC3-205ENST00000553807 HERC5Q9UII4 1024 aaKnown RBP24.69■■□□□ 1.54
XRCC3-205ENST00000553807 NAV1Q8NEY1 1877 aa24.68■■□□□ 1.54
XRCC3-205ENST00000553807 HLA-DOAP06340 250 aa24.68■■□□□ 1.54
XRCC3-205ENST00000553807 CETPP11597 493 aa24.68■■□□□ 1.54
XRCC3-205ENST00000553807 MX1P20591 662 aa24.68■■□□□ 1.54
XRCC3-205ENST00000553807 LCORLQ8N3X6 602 aa24.68■■□□□ 1.54
XRCC3-205ENST00000553807 CRNKL1Q9BZJ0 848 aaKnown RBP24.68■■□□□ 1.54
XRCC3-205ENST00000553807 R3HDMLQ9H3Y0 253 aa24.68■■□□□ 1.54
XRCC3-205ENST00000553807 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.68■■□□□ 1.54
XRCC3-205ENST00000553807 MYH1P12882 1939 aa24.67■■□□□ 1.54
XRCC3-205ENST00000553807 ERC2O15083 957 aa24.67■■□□□ 1.54
XRCC3-205ENST00000553807 CTNND1O60716 968 aaKnown RBP24.67■■□□□ 1.54
XRCC3-205ENST00000553807 MBD4O95243 580 aa24.67■■□□□ 1.54
XRCC3-205ENST00000553807 ZSCAN25Q6NSZ9 544 aa24.67■■□□□ 1.54
XRCC3-205ENST00000553807 ARMT1Q9H993 441 aa24.67■■□□□ 1.54
XRCC3-205ENST00000553807 DDX60LQ5H9U9 1706 aaKnown RBP24.66■■□□□ 1.54
XRCC3-205ENST00000553807 PTPRAP18433 802 aa24.66■■□□□ 1.54
XRCC3-205ENST00000553807 PI4K2BQ8TCG2 481 aa24.66■■□□□ 1.54
XRCC3-205ENST00000553807 ZHX2Q9Y6X8 837 aa24.66■■□□□ 1.54
XRCC3-205ENST00000553807 GPR25O00155 361 aa24.65■■□□□ 1.54
XRCC3-205ENST00000553807 GLRX3O76003 335 aaKnown RBP24.65■■□□□ 1.54
XRCC3-205ENST00000553807 CRHR2Q13324 411 aa24.65■■□□□ 1.54
XRCC3-205ENST00000553807 UBE3CQ15386 1083 aa24.65■■□□□ 1.54
XRCC3-205ENST00000553807 B4GALNT3Q6L9W6 998 aa24.65■■□□□ 1.54
XRCC3-205ENST00000553807 CCDC84Q86UT8 332 aaPredicted RBP24.65■■□□□ 1.54
XRCC3-205ENST00000553807 FAM43AQ8N2R8 423 aa24.65■■□□□ 1.54
XRCC3-205ENST00000553807 KBTBD3Q8NAB2 608 aa24.65■■□□□ 1.54
XRCC3-205ENST00000553807 ZNF296Q8WUU4 475 aaPredicted RBP24.65■■□□□ 1.54
XRCC3-205ENST00000553807 CFHR5Q9BXR6 569 aa24.65■■□□□ 1.54
XRCC3-205ENST00000553807 DNAJC18Q9H819 358 aa24.65■■□□□ 1.54
XRCC3-205ENST00000553807 KCNH4Q9UQ05 1017 aa24.65■■□□□ 1.54
XRCC3-205ENST00000553807 ATAD5Q96QE3 1844 aa24.65■■□□□ 1.54
XRCC3-205ENST00000553807 IGHDP01880 384 aa24.64■■□□□ 1.54
XRCC3-205ENST00000553807 RRP1BQ14684 758 aaKnown RBP24.64■■□□□ 1.54
XRCC3-205ENST00000553807 SDR42E1Q8WUS8 393 aa24.64■■□□□ 1.54
XRCC3-205ENST00000553807 SALL3Q9BXA9 1300 aa24.63■■□□□ 1.53
XRCC3-205ENST00000553807 BTBD19C9JJ37 291 aa24.63■■□□□ 1.53
XRCC3-205ENST00000553807 TAF1CQ15572 869 aaPredicted RBP24.63■■□□□ 1.53
XRCC3-205ENST00000553807 FOXP4Q8IVH2 680 aaPredicted RBP24.63■■□□□ 1.53
XRCC3-205ENST00000553807 LNPKQ9C0E8 428 aa24.63■■□□□ 1.53
XRCC3-205ENST00000553807 CAP2P40123 477 aa24.62■■□□□ 1.53
XRCC3-205ENST00000553807 SMC5Q8IY18 1101 aa24.62■■□□□ 1.53
XRCC3-205ENST00000553807 MCM9Q9NXL9 1143 aa24.62■■□□□ 1.53
XRCC3-205ENST00000553807 TRIM75PA6NK02 468 aa24.61■■□□□ 1.53
XRCC3-205ENST00000553807 PRKAB2O43741 272 aa24.61■■□□□ 1.53
XRCC3-205ENST00000553807 POLR3DP05423 398 aaPredicted RBP24.61■■□□□ 1.53
XRCC3-205ENST00000553807 DGKZQ13574 1117 aa24.61■■□□□ 1.53
XRCC3-205ENST00000553807 TTC6Q86TZ1 520 aa24.61■■□□□ 1.53
XRCC3-205ENST00000553807 METTL16Q86W50 562 aaKnown RBP24.61■■□□□ 1.53
XRCC3-205ENST00000553807 PHIPQ8WWQ0 1821 aa24.61■■□□□ 1.53
XRCC3-205ENST00000553807 CXCL11O14625 94 aa24.6■■□□□ 1.53
XRCC3-205ENST00000553807 FKTNO75072 461 aa24.6■■□□□ 1.53
XRCC3-205ENST00000553807 GDF11O95390 407 aa24.6■■□□□ 1.53
XRCC3-205ENST00000553807 NOM1Q5C9Z4 860 aaKnown RBP24.6■■□□□ 1.53
XRCC3-205ENST00000553807 IFFO2Q5TF58 517 aa24.6■■□□□ 1.53
XRCC3-205ENST00000553807 FSD1Q9BTV5 496 aa24.6■■□□□ 1.53
XRCC3-205ENST00000553807 PUS7LQ9H0K6 701 aaKnown RBP24.6■■□□□ 1.53
XRCC3-205ENST00000553807 DCP1AQ9NPI6 582 aaPredicted RBP24.6■■□□□ 1.53
XRCC3-205ENST00000553807 SERPINB13Q9UIV8 391 aa24.6■■□□□ 1.53
XRCC3-205ENST00000553807 AFG3L2Q9Y4W6 797 aa24.6■■□□□ 1.53
XRCC3-205ENST00000553807 RNF113AO15541 343 aaKnown RBP24.59■■□□□ 1.53
XRCC3-205ENST00000553807 CAPN15O75808 1086 aa24.59■■□□□ 1.53
XRCC3-205ENST00000553807 MCOLN1Q9GZU1 580 aa24.59■■□□□ 1.53
XRCC3-205ENST00000553807 EHD4Q9H223 541 aa24.59■■□□□ 1.53
XRCC3-205ENST00000553807 ZFYVE28Q9HCC9 887 aa24.59■■□□□ 1.53
XRCC3-205ENST00000553807 A0A0G2JLL6 359 aaPredicted RBP24.58■■□□□ 1.53
XRCC3-205ENST00000553807 PLCD1P51178 756 aa24.58■■□□□ 1.53
XRCC3-205ENST00000553807 PDE1AP54750 535 aa24.58■■□□□ 1.53
XRCC3-205ENST00000553807 MOGSQ13724 837 aa24.58■■□□□ 1.53
XRCC3-205ENST00000553807 SHROOM1Q2M3G4 852 aaPredicted RBP24.58■■□□□ 1.53
XRCC3-205ENST00000553807 GADL1Q6ZQY3 521 aa24.58■■□□□ 1.53
XRCC3-205ENST00000553807 PRRT2Q7Z6L0 340 aaPredicted RBP24.58■■□□□ 1.53
XRCC3-205ENST00000553807 ANKRD23Q86SG2 305 aa24.58■■□□□ 1.53
XRCC3-205ENST00000553807 APPBP2Q92624 585 aa24.58■■□□□ 1.53
XRCC3-205ENST00000553807 ZCCHC17Q9NP64 241 aaKnown RBP24.58■■□□□ 1.53
XRCC3-205ENST00000553807 SLC4A4Q9Y6R1 1079 aa24.58■■□□□ 1.53
XRCC3-205ENST00000553807 PDHXO00330 501 aa24.57■■□□□ 1.52
XRCC3-205ENST00000553807 ZFYP08048 801 aaPredicted RBP24.57■■□□□ 1.52
XRCC3-205ENST00000553807 CYP2D6P10635 497 aa24.57■■□□□ 1.52
XRCC3-205ENST00000553807 JAG1P78504 1218 aa24.57■■□□□ 1.52
XRCC3-205ENST00000553807 EVX2Q03828 476 aa24.57■■□□□ 1.52
XRCC3-205ENST00000553807 LRRFIP1Q32MZ4 808 aaKnown RBP24.57■■□□□ 1.52
XRCC3-205ENST00000553807 CTU1Q7Z7A3 348 aaKnown RBP24.57■■□□□ 1.52
XRCC3-205ENST00000553807 CHD1LQ86WJ1 897 aa24.57■■□□□ 1.52
XRCC3-205ENST00000553807 STAP2Q9UGK3 403 aa24.57■■□□□ 1.52
XRCC3-205ENST00000553807 PTPRFP10586 1907 aa24.57■■□□□ 1.52
XRCC3-205ENST00000553807 USP17L5A8MUK1 530 aa24.56■■□□□ 1.52
XRCC3-205ENST00000553807 ASNSP08243 561 aa24.56■■□□□ 1.52
XRCC3-205ENST00000553807 NUCB1Q02818 461 aa24.56■■□□□ 1.52
XRCC3-205ENST00000553807 SPP2Q13103 211 aa24.56■■□□□ 1.52
XRCC3-205ENST00000553807 ZNF280CQ8ND82 737 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms