RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 TCRBV5S4A2TA0A5A2 114 aa12.36□□□□□ -0.43
HNRNPC-208ENST00000553753 PTPRAP18433 802 aa12.36□□□□□ -0.43
HNRNPC-208ENST00000553753 CRHR2Q13324 411 aa12.36□□□□□ -0.43
HNRNPC-208ENST00000553753 FOXP4Q8IVH2 680 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-208ENST00000553753 KCNH4Q9UQ05 1017 aa12.36□□□□□ -0.43
HNRNPC-208ENST00000553753 ZHX2Q9Y6X8 837 aa12.36□□□□□ -0.43
HNRNPC-208ENST00000553753 CDK5RAP2Q96SN8 1893 aa12.36□□□□□ -0.43
HNRNPC-208ENST00000553753 FOCADQ5VW36 1801 aa12.36□□□□□ -0.43
HNRNPC-208ENST00000553753 ADD2P35612 726 aa12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 DGKZQ13574 1117 aa12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 FAM43AQ8N2R8 423 aa12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 GCC1Q96CN9 775 aa12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 SAP30BPQ9UHR5 308 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 BTBD19C9JJ37 291 aa12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 CXCL11O14625 94 aa12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 FKTNO75072 461 aa12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 HLA-DOAP06340 250 aa12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 TSHZ3Q63HK5 1081 aa12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 CRACR2BQ8N4Y2 399 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 MCOLN1Q9GZU1 580 aa12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 ZCCHC17Q9NP64 241 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 ZBTB47Q9UFB7 747 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 AFG3L2Q9Y4W6 797 aa12.35□□□□□ -0.43
HNRNPC-208ENST00000553753 CAP2P40123 477 aa12.34□□□□□ -0.43
HNRNPC-208ENST00000553753 UBE3CQ15386 1083 aa12.34□□□□□ -0.43
HNRNPC-208ENST00000553753 TAF1CQ15572 869 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-208ENST00000553753 ANKRD45Q5TZF3 282 aa12.34□□□□□ -0.43
HNRNPC-208ENST00000553753 ZSCAN25Q6NSZ9 544 aa12.34□□□□□ -0.43
HNRNPC-208ENST00000553753 EXOC6Q8TAG9 804 aa12.34□□□□□ -0.43
HNRNPC-208ENST00000553753 ABHD8Q96I13 439 aa12.34□□□□□ -0.43
HNRNPC-208ENST00000553753 TRIM34Q9BYJ4 488 aa12.34□□□□□ -0.43
HNRNPC-208ENST00000553753 CRNKL1Q9BZJ0 848 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-208ENST00000553753 ZFYVE28Q9HCC9 887 aa12.34□□□□□ -0.43
HNRNPC-208ENST00000553753 TTC41PQ6P2S7 1318 aa12.34□□□□□ -0.43
HNRNPC-208ENST00000553753 ERC2O15083 957 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 CAPN15O75808 1086 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 RRP1BQ14684 758 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 SLC4A8Q2Y0W8 1093 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 SLFNL1Q499Z3 407 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 CTU1Q7Z7A3 348 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 TTC6Q86TZ1 520 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 DNAJC18Q9H819 358 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 HTTP42858 3142 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 CHGBP05060 677 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 MOGSQ13724 837 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 ANKRD23Q86SG2 305 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 LCORLQ8N3X6 602 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 KBTBD3Q8NAB2 608 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 OTUD7AQ8TE49 926 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 RWDD1Q9H446 243 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 SERPINB13Q9UIV8 391 aa12.33□□□□□ -0.44
HNRNPC-208ENST00000553753 DOCK1Q14185 1865 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 MYH1P12882 1939 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 SIPA1L1O43166 1804 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 A0A0G2JLL6 359 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 TRIM75PA6NK02 468 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 PDHXO00330 501 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 TLR2O60603 784 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 GLRX3O76003 335 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 ASNSP08243 561 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 MX1P20591 662 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 SP3Q02447 781 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 FASTKD5Q7L8L6 764 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 PRRT2Q7Z6L0 340 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 PI4K2BQ8TCG2 481 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 SDR42E1Q8WUS8 393 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 EHD4Q9H223 541 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 ARMT1Q9H993 441 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 MCM9Q9NXL9 1143 aa12.32□□□□□ -0.44
HNRNPC-208ENST00000553753 MBD4O95243 580 aa12.31□□□□□ -0.44
HNRNPC-208ENST00000553753 POLR3DP05423 398 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-208ENST00000553753 PLCD1P51178 756 aa12.31□□□□□ -0.44
HNRNPC-208ENST00000553753 PKN2Q16513 984 aaKnown RBP12.31□□□□□ -0.44
HNRNPC-208ENST00000553753 ZNF280CQ8ND82 737 aa12.31□□□□□ -0.44
HNRNPC-208ENST00000553753 TBC1D2Q9BYX2 928 aa12.31□□□□□ -0.44
HNRNPC-208ENST00000553753 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
HNRNPC-208ENST00000553753 DCP1AQ9NPI6 582 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-208ENST00000553753 USP17L5A8MUK1 530 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 SPP2Q13103 211 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 TATDN1Q6P1N9 297 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 SMC5Q8IY18 1101 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 ERO1AQ96HE7 468 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 ATP8A2Q9NTI2 1148 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 GINM1Q9NU53 330 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 SALL3Q9BXA9 1300 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 MYH7P12883 1935 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 PHIPQ8WWQ0 1821 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 PRKAB2O43741 272 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 GDF11O95390 407 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 IGHDP01880 384 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 ZFYP08048 801 aaPredicted RBP12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 JAG1P78504 1218 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 LRRFIP1Q32MZ4 808 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 GPAT2Q6NUI2 795 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 GADL1Q6ZQY3 521 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 AS3MTQ9HBK9 375 aa12.3□□□□□ -0.44
HNRNPC-208ENST00000553753 BRCA2P51587 3418 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms