RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 TAOK2Q9UL54 1235 aa21.5■■□□□ 1.03
PSEN1-208ENST00000553719 TRPM7Q96QT4 1865 aa21.49■■□□□ 1.03
PSEN1-208ENST00000553719 POLR3DP05423 398 aaPredicted RBP21.49■■□□□ 1.03
PSEN1-208ENST00000553719 HLA-DOAP06340 250 aa21.49■■□□□ 1.03
PSEN1-208ENST00000553719 FMR1Q06787 632 aaKnown RBP eCLIP21.49■■□□□ 1.03
PSEN1-208ENST00000553719 SLC4A8Q2Y0W8 1093 aa21.49■■□□□ 1.03
PSEN1-208ENST00000553719 ZSCAN29Q8IWY8 852 aaPredicted RBP21.49■■□□□ 1.03
PSEN1-208ENST00000553719 USP26Q9BXU7 913 aa21.49■■□□□ 1.03
PSEN1-208ENST00000553719 CTNNA3Q9UI47 895 aa21.49■■□□□ 1.03
PSEN1-208ENST00000553719 TACC3Q9Y6A5 838 aa21.49■■□□□ 1.03
PSEN1-208ENST00000553719 CYP21A2P08686 494 aa21.48■■□□□ 1.03
PSEN1-208ENST00000553719 FGRP09769 529 aa21.48■■□□□ 1.03
PSEN1-208ENST00000553719 C16orf86Q6ZW13 317 aa21.48■■□□□ 1.03
PSEN1-208ENST00000553719 FOXP4Q8IVH2 680 aaPredicted RBP21.48■■□□□ 1.03
PSEN1-208ENST00000553719 KCNB2Q92953 911 aa21.48■■□□□ 1.03
PSEN1-208ENST00000553719 BACH2Q9BYV9 841 aa21.48■■□□□ 1.03
PSEN1-208ENST00000553719 HERC5Q9UII4 1024 aaKnown RBP21.48■■□□□ 1.03
PSEN1-208ENST00000553719 SERPINB13Q9UIV8 391 aa21.48■■□□□ 1.03
PSEN1-208ENST00000553719 OTOFQ9HC10 1997 aa21.48■■□□□ 1.03
PSEN1-208ENST00000553719 MINDY4BA8MYZ0 360 aa21.47■■□□□ 1.03
PSEN1-208ENST00000553719 EIF5BO60841 1220 aaKnown RBP21.47■■□□□ 1.03
PSEN1-208ENST00000553719 SUPT20HL1Q3ZLR7 823 aa21.47■■□□□ 1.03
PSEN1-208ENST00000553719 TBC1D10CQ8IV04 446 aa21.47■■□□□ 1.03
PSEN1-208ENST00000553719 AMOTL1Q8IY63 956 aa21.47■■□□□ 1.03
PSEN1-208ENST00000553719 DYNLL2Q96FJ2 89 aa21.47■■□□□ 1.03
PSEN1-208ENST00000553719 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.47■■□□□ 1.03
PSEN1-208ENST00000553719 TAF6LQ9Y6J9 622 aa21.47■■□□□ 1.03
PSEN1-208ENST00000553719 SHMT1P34896 483 aa21.46■■□□□ 1.03
PSEN1-208ENST00000553719 HSPA4P34932 840 aa21.46■■□□□ 1.03
PSEN1-208ENST00000553719 FSTL1Q12841 308 aa21.46■■□□□ 1.03
PSEN1-208ENST00000553719 HOOK2Q96ED9 719 aa21.46■■□□□ 1.03
PSEN1-208ENST00000553719 MYH8P13535 1937 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 GREB1LQ9C091 1923 aaPredicted RBP21.45■■□□□ 1.02
PSEN1-208ENST00000553719 FAM196BA6NMK8 535 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 SLC27A2O14975 620 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 HAND2P61296 217 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 CTDSPL2Q05D32 466 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 MAP3K11Q16584 847 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 IMMTQ16891 758 aaKnown RBP21.45■■□□□ 1.02
PSEN1-208ENST00000553719 CREB3L3Q68CJ9 461 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 TATDN1Q6P1N9 297 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 SLC44A5Q8NCS7 719 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 STAG1Q8WVM7 1258 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 SWAP70Q9UH65 585 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 ZNF112Q9UJU3 913 aa21.45■■□□□ 1.02
PSEN1-208ENST00000553719 PHF20L1A8MW92 1017 aa21.44■■□□□ 1.02
PSEN1-208ENST00000553719 ZNF213O14771 459 aa21.44■■□□□ 1.02
PSEN1-208ENST00000553719 DCAF15Q66K64 600 aa21.44■■□□□ 1.02
PSEN1-208ENST00000553719 MIGA2Q7L4E1 593 aa21.44■■□□□ 1.02
PSEN1-208ENST00000553719 USP2O75604 605 aaPredicted RBP21.43■■□□□ 1.02
PSEN1-208ENST00000553719 CDK8P49336 464 aa21.43■■□□□ 1.02
PSEN1-208ENST00000553719 RRP1BQ14684 758 aaKnown RBP21.43■■□□□ 1.02
PSEN1-208ENST00000553719 TSGA10IPQ3SY00 556 aa21.43■■□□□ 1.02
PSEN1-208ENST00000553719 CST9Q5W186 159 aa21.43■■□□□ 1.02
PSEN1-208ENST00000553719 STOX1Q6ZVD7 989 aa21.43■■□□□ 1.02
PSEN1-208ENST00000553719 RASEFQ8IZ41 740 aa21.43■■□□□ 1.02
PSEN1-208ENST00000553719 KLRG1Q96E93 195 aa21.43■■□□□ 1.02
PSEN1-208ENST00000553719 ZNF341Q9BYN7 854 aa21.43■■□□□ 1.02
PSEN1-208ENST00000553719 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.43■■□□□ 1.02
PSEN1-208ENST00000553719 FZD1Q9UP38 647 aa21.43■■□□□ 1.02
PSEN1-208ENST00000553719 ORC4O43929 436 aa21.42■■□□□ 1.02
PSEN1-208ENST00000553719 PCP11498 1178 aaKnown RBP21.42■■□□□ 1.02
PSEN1-208ENST00000553719 NEDD4P46934 1319 aa21.42■■□□□ 1.02
PSEN1-208ENST00000553719 DOCK1Q14185 1865 aa21.42■■□□□ 1.02
PSEN1-208ENST00000553719 AKNAD1Q5T1N1 836 aa21.42■■□□□ 1.02
PSEN1-208ENST00000553719 CRACR2BQ8N4Y2 399 aaPredicted RBP21.42■■□□□ 1.02
PSEN1-208ENST00000553719 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.42■■□□□ 1.02
PSEN1-208ENST00000553719 NKX2-3Q8TAU0 364 aa21.42■■□□□ 1.02
PSEN1-208ENST00000553719 IL17RAQ96F46 866 aa21.42■■□□□ 1.02
PSEN1-208ENST00000553719 ATAD5Q96QE3 1844 aa21.41■■□□□ 1.02
PSEN1-208ENST00000553719 CELF2O95319 508 aaKnown RBP21.41■■□□□ 1.02
PSEN1-208ENST00000553719 RASA1P20936 1047 aa21.41■■□□□ 1.02
PSEN1-208ENST00000553719 NF2P35240 595 aa21.41■■□□□ 1.02
PSEN1-208ENST00000553719 FKBP1BP68106 108 aa21.41■■□□□ 1.02
PSEN1-208ENST00000553719 INCENPQ9NQS7 918 aa21.41■■□□□ 1.02
PSEN1-208ENST00000553719 E7EWF7 191 aa21.4■■□□□ 1.02
PSEN1-208ENST00000553719 SLC3A2P08195 630 aaKnown RBP21.4■■□□□ 1.02
PSEN1-208ENST00000553719 PLIN4Q96Q06 1357 aa21.39■■□□□ 1.02
PSEN1-208ENST00000553719 PPP1R12BO60237 982 aaPredicted RBP21.39■■□□□ 1.01
PSEN1-208ENST00000553719 PRDM1O75626 825 aa21.39■■□□□ 1.01
PSEN1-208ENST00000553719 JAG1P78504 1218 aa21.39■■□□□ 1.01
PSEN1-208ENST00000553719 PDE4BQ07343 736 aa21.39■■□□□ 1.01
PSEN1-208ENST00000553719 RNF20Q5VTR2 975 aa21.39■■□□□ 1.01
PSEN1-208ENST00000553719 MOB2Q70IA6 237 aa21.39■■□□□ 1.01
PSEN1-208ENST00000553719 RNF41Q9H4P4 317 aaPredicted RBP21.39■■□□□ 1.01
PSEN1-208ENST00000553719 GBA2Q9HCG7 927 aaPredicted RBP21.39■■□□□ 1.01
PSEN1-208ENST00000553719 SNX14Q9Y5W7 946 aa21.39■■□□□ 1.01
PSEN1-208ENST00000553719 INPP5BP32019 993 aa21.38■■□□□ 1.01
PSEN1-208ENST00000553719 NT5C2P49902 561 aa21.38■■□□□ 1.01
PSEN1-208ENST00000553719 NOL9Q5SY16 702 aaKnown RBP21.38■■□□□ 1.01
PSEN1-208ENST00000553719 LDLRAD1Q5T700 205 aa21.38■■□□□ 1.01
PSEN1-208ENST00000553719 MFSD6Q6ZSS7 791 aa21.38■■□□□ 1.01
PSEN1-208ENST00000553719 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.38■■□□□ 1.01
PSEN1-208ENST00000553719 STK11IPQ8N1F8 1099 aa21.38■■□□□ 1.01
PSEN1-208ENST00000553719 WRNIP1Q96S55 665 aa21.38■■□□□ 1.01
PSEN1-208ENST00000553719 TRIM34Q9BYJ4 488 aa21.38■■□□□ 1.01
PSEN1-208ENST00000553719 ZNF408Q9H9D4 720 aa21.38■■□□□ 1.01
PSEN1-208ENST00000553719 ZNF287Q9HBT7 754 aa21.38■■□□□ 1.01
PSEN1-208ENST00000553719 AKR1B1P15121 316 aa21.37■■□□□ 1.01
PSEN1-208ENST00000553719 CAP2P40123 477 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms