RNA–Protein interactions for RNA: ENST00000553674.1

UBR7-202, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 2

Gene UBR7, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-202ENST00000553674 GLIS2Q9BZE0 524 aaPredicted RBP21.86■■□□□ 1.09
UBR7-202ENST00000553674 C22orf23Q9BZE7 217 aa21.86■■□□□ 1.09
UBR7-202ENST00000553674 DNAJC18Q9H819 358 aa21.86■■□□□ 1.09
UBR7-202ENST00000553674 GPBP1L1Q9HC44 474 aaPredicted RBP21.86■■□□□ 1.09
UBR7-202ENST00000553674 PI4KBQ9UBF8 816 aa21.86■■□□□ 1.09
UBR7-202ENST00000553674 PPP2R3BQ9Y5P8 575 aa21.86■■□□□ 1.09
UBR7-202ENST00000553674 POLR2AP24928 1970 aaKnown RBP21.86■■□□□ 1.09
UBR7-202ENST00000553674 ROBO3Q96MS0 1386 aa21.86■■□□□ 1.09
UBR7-202ENST00000553674 FGRP09769 529 aa21.85■■□□□ 1.09
UBR7-202ENST00000553674 YY1P25490 414 aa21.85■■□□□ 1.09
UBR7-202ENST00000553674 RBM25P49756 843 aaKnown RBP21.85■■□□□ 1.09
UBR7-202ENST00000553674 MAP3K10Q02779 954 aa21.85■■□□□ 1.09
UBR7-202ENST00000553674 COL9A3Q14050 684 aaPredicted RBP21.85■■□□□ 1.09
UBR7-202ENST00000553674 STK11IPQ8N1F8 1099 aa21.85■■□□□ 1.09
UBR7-202ENST00000553674 IL17RAQ96F46 866 aa21.85■■□□□ 1.09
UBR7-202ENST00000553674 CSRNP1Q96S65 589 aa21.85■■□□□ 1.09
UBR7-202ENST00000553674 EHD4Q9H223 541 aa21.85■■□□□ 1.09
UBR7-202ENST00000553674 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.85■■□□□ 1.09
UBR7-202ENST00000553674 CDC37L1Q7L3B6 337 aa21.84■■□□□ 1.09
UBR7-202ENST00000553674 FOXP4Q8IVH2 680 aaPredicted RBP21.84■■□□□ 1.09
UBR7-202ENST00000553674 SULF1Q8IWU6 871 aa21.84■■□□□ 1.09
UBR7-202ENST00000553674 SLC44A5Q8NCS7 719 aa21.84■■□□□ 1.09
UBR7-202ENST00000553674 TBC1D32Q96NH3 1257 aa21.84■■□□□ 1.09
UBR7-202ENST00000553674 LAMA4Q16363 1823 aa21.83■■□□□ 1.09
UBR7-202ENST00000553674 FAM196BA6NMK8 535 aa21.83■■□□□ 1.09
UBR7-202ENST00000553674 E7EWF7 191 aa21.83■■□□□ 1.09
UBR7-202ENST00000553674 HLA-DOAP06340 250 aa21.83■■□□□ 1.09
UBR7-202ENST00000553674 ADCK5Q3MIX3 580 aa21.83■■□□□ 1.09
UBR7-202ENST00000553674 AKNAD1Q5T1N1 836 aa21.83■■□□□ 1.09
UBR7-202ENST00000553674 C16orf86Q6ZW13 317 aa21.83■■□□□ 1.09
UBR7-202ENST00000553674 AMOTL1Q8IY63 956 aa21.83■■□□□ 1.09
UBR7-202ENST00000553674 STAG1Q8WVM7 1258 aa21.83■■□□□ 1.09
UBR7-202ENST00000553674 KIF2CQ99661 725 aa21.83■■□□□ 1.09
UBR7-202ENST00000553674 SERPINB13Q9UIV8 391 aa21.83■■□□□ 1.09
UBR7-202ENST00000553674 SSC5DA1L4H1 1573 aa21.82■■□□□ 1.08
UBR7-202ENST00000553674 LAMB1P07942 1786 aa21.82■■□□□ 1.08
UBR7-202ENST00000553674 SHMT1P34896 483 aa21.82■■□□□ 1.08
UBR7-202ENST00000553674 CDK8P49336 464 aa21.82■■□□□ 1.08
UBR7-202ENST00000553674 RNF20Q5VTR2 975 aa21.82■■□□□ 1.08
UBR7-202ENST00000553674 CDCA5Q96FF9 252 aa21.82■■□□□ 1.08
UBR7-202ENST00000553674 TBC1D12O60347 775 aa21.81■■□□□ 1.08
UBR7-202ENST00000553674 PRDM1O75626 825 aa21.81■■□□□ 1.08
UBR7-202ENST00000553674 MCCP23508 829 aa21.81■■□□□ 1.08
UBR7-202ENST00000553674 FMR1Q06787 632 aaKnown RBP eCLIP21.81■■□□□ 1.08
UBR7-202ENST00000553674 RRP1BQ14684 758 aaKnown RBP21.81■■□□□ 1.08
UBR7-202ENST00000553674 CHADLQ6NUI6 762 aa21.81■■□□□ 1.08
UBR7-202ENST00000553674 MIGA2Q7L4E1 593 aa21.81■■□□□ 1.08
UBR7-202ENST00000553674 ZNF784Q8NCA9 323 aaPredicted RBP21.81■■□□□ 1.08
UBR7-202ENST00000553674 UPF2Q9HAU5 1272 aaKnown RBP21.81■■□□□ 1.08
UBR7-202ENST00000553674 NEDD4P46934 1319 aa21.8■■□□□ 1.08
UBR7-202ENST00000553674 TRAF5O00463 557 aa21.8■■□□□ 1.08
UBR7-202ENST00000553674 ORC4O43929 436 aa21.8■■□□□ 1.08
UBR7-202ENST00000553674 ITGBL1O95965 494 aaPredicted RBP21.8■■□□□ 1.08
UBR7-202ENST00000553674 ZKSCAN1P17029 563 aaPredicted RBP21.8■■□□□ 1.08
UBR7-202ENST00000553674 ANAPC15P60006 121 aa21.8■■□□□ 1.08
UBR7-202ENST00000553674 TATDN1Q6P1N9 297 aa21.8■■□□□ 1.08
UBR7-202ENST00000553674 RASA1P20936 1047 aa21.79■■□□□ 1.08
UBR7-202ENST00000553674 MFSD6Q6ZSS7 791 aa21.79■■□□□ 1.08
UBR7-202ENST00000553674 HERC5Q9UII4 1024 aaKnown RBP21.79■■□□□ 1.08
UBR7-202ENST00000553674 TAOK2Q9UL54 1235 aa21.79■■□□□ 1.08
UBR7-202ENST00000553674 PHF20L1A8MW92 1017 aa21.78■■□□□ 1.08
UBR7-202ENST00000553674 SLC3A2P08195 630 aaKnown RBP21.78■■□□□ 1.08
UBR7-202ENST00000553674 JAG1P78504 1218 aa21.78■■□□□ 1.08
UBR7-202ENST00000553674 SUPT20HL1Q3ZLR7 823 aa21.78■■□□□ 1.08
UBR7-202ENST00000553674 CRACR2BQ8N4Y2 399 aaPredicted RBP21.78■■□□□ 1.08
UBR7-202ENST00000553674 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.78■■□□□ 1.08
UBR7-202ENST00000553674 SWAP70Q9UH65 585 aa21.78■■□□□ 1.08
UBR7-202ENST00000553674 FZD1Q9UP38 647 aa21.78■■□□□ 1.08
UBR7-202ENST00000553674 PCP11498 1178 aaKnown RBP21.77■■□□□ 1.08
UBR7-202ENST00000553674 PDE4BQ07343 736 aa21.77■■□□□ 1.08
UBR7-202ENST00000553674 MB21D2Q8IYB1 491 aaPredicted RBP21.77■■□□□ 1.08
UBR7-202ENST00000553674 RNF41Q9H4P4 317 aaPredicted RBP21.77■■□□□ 1.08
UBR7-202ENST00000553674 B4E1Z4 1266 aa21.76■■□□□ 1.07
UBR7-202ENST00000553674 USP2O75604 605 aaPredicted RBP21.76■■□□□ 1.07
UBR7-202ENST00000553674 CPA1P15085 419 aa21.76■■□□□ 1.07
UBR7-202ENST00000553674 KRT32Q14532 448 aa21.76■■□□□ 1.07
UBR7-202ENST00000553674 SHROOM1Q2M3G4 852 aaPredicted RBP21.76■■□□□ 1.07
UBR7-202ENST00000553674 CYB5R4Q7L1T6 521 aa21.76■■□□□ 1.07
UBR7-202ENST00000553674 JAKMIP1Q96N16 626 aaKnown RBP21.76■■□□□ 1.07
UBR7-202ENST00000553674 NEK1Q96PY6 1258 aa21.76■■□□□ 1.07
UBR7-202ENST00000553674 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.76■■□□□ 1.07
UBR7-202ENST00000553674 TM6SF1Q9BZW5 370 aa21.76■■□□□ 1.07
UBR7-202ENST00000553674 MKNK2Q9HBH9 465 aa21.76■■□□□ 1.07
UBR7-202ENST00000553674 ZNF112Q9UJU3 913 aa21.76■■□□□ 1.07
UBR7-202ENST00000553674 ANTXR2P58335 489 aa21.75■■□□□ 1.07
UBR7-202ENST00000553674 FAM47AQ5JRC9 791 aa21.75■■□□□ 1.07
UBR7-202ENST00000553674 RRP12Q5JTH9 1297 aaKnown RBP21.75■■□□□ 1.07
UBR7-202ENST00000553674 NCOA7Q8NI08 942 aa21.75■■□□□ 1.07
UBR7-202ENST00000553674 ZSWIM6Q9HCJ5 1215 aa21.75■■□□□ 1.07
UBR7-202ENST00000553674 ZSWIM5Q9P217 1185 aa21.75■■□□□ 1.07
UBR7-202ENST00000553674 KDM4AO75164 1064 aa21.74■■□□□ 1.07
UBR7-202ENST00000553674 AKR1B1P15121 316 aa21.74■■□□□ 1.07
UBR7-202ENST00000553674 EXOSC10Q01780 885 aaKnown RBP21.74■■□□□ 1.07
UBR7-202ENST00000553674 HOOK2Q96ED9 719 aa21.74■■□□□ 1.07
UBR7-202ENST00000553674 ZNF341Q9BYN7 854 aa21.74■■□□□ 1.07
UBR7-202ENST00000553674 KRT23Q9C075 422 aa21.74■■□□□ 1.07
UBR7-202ENST00000553674 CNNM2Q9H8M5 875 aa21.74■■□□□ 1.07
UBR7-202ENST00000553674 RANBP6O60518 1105 aaKnown RBP21.73■■□□□ 1.07
UBR7-202ENST00000553674 TFAP4Q01664 338 aa21.73■■□□□ 1.07
UBR7-202ENST00000553674 DCAF15Q66K64 600 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms