RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 CACNB3P54284 484 aa16.21■□□□□ 0.19
APEX1-205ENST00000553555 ME3Q16798 604 aa16.21■□□□□ 0.19
APEX1-205ENST00000553555 TTC6Q86TZ1 520 aa16.21■□□□□ 0.19
APEX1-205ENST00000553555 ESR2Q92731 530 aa16.21■□□□□ 0.19
APEX1-205ENST00000553555 SH2B1Q9NRF2 756 aaPredicted RBP16.21■□□□□ 0.19
APEX1-205ENST00000553555 FAM198AQ9UFP1 575 aa16.21■□□□□ 0.19
APEX1-205ENST00000553555 SHTN1A0MZ66 631 aa16.2■□□□□ 0.18
APEX1-205ENST00000553555 PRDM1O75626 825 aa16.2■□□□□ 0.18
APEX1-205ENST00000553555 LARGE1O95461 756 aa16.2■□□□□ 0.18
APEX1-205ENST00000553555 HSP90AA1P07900 732 aaKnown RBP16.2■□□□□ 0.18
APEX1-205ENST00000553555 IGDCC4Q8TDY8 1250 aa16.2■□□□□ 0.18
APEX1-205ENST00000553555 DYNLL2Q96FJ2 89 aa16.2■□□□□ 0.18
APEX1-205ENST00000553555 TMEM87BQ96K49 555 aa16.2■□□□□ 0.18
APEX1-205ENST00000553555 MTA3Q9BTC8 594 aa16.2■□□□□ 0.18
APEX1-205ENST00000553555 MYOZ2Q9NPC6 264 aa16.2■□□□□ 0.18
APEX1-205ENST00000553555 GPHNQ9NQX3 736 aaPredicted RBP16.2■□□□□ 0.18
APEX1-205ENST00000553555 RNF181Q9P0P0 153 aa16.2■□□□□ 0.18
APEX1-205ENST00000553555 CNOT7Q9UIV1 285 aaKnown RBP16.2■□□□□ 0.18
APEX1-205ENST00000553555 NT5C2P49902 561 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 EVCP57679 992 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 APOBRQ0VD83 1088 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 GPR162Q16538 588 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 ZFPM1Q8IX07 1006 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 ZNF70Q9UC06 446 aaPredicted RBP16.19■□□□□ 0.18
APEX1-205ENST00000553555 SIPA1L1O43166 1804 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 SH2B2O14492 632 aaPredicted RBP16.19■□□□□ 0.18
APEX1-205ENST00000553555 RANBP6O60518 1105 aaKnown RBP16.19■□□□□ 0.18
APEX1-205ENST00000553555 ENTPD3O75355 529 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 SPDYE2Q495Y8 402 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 C16orf86Q6ZW13 317 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 GPC2Q8N158 579 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 INTS4Q96HW7 963 aaKnown RBP16.19■□□□□ 0.18
APEX1-205ENST00000553555 MKNK2Q9HBH9 465 aa16.19■□□□□ 0.18
APEX1-205ENST00000553555 WNT10BO00744 389 aa16.18■□□□□ 0.18
APEX1-205ENST00000553555 IFIT3O14879 490 aaKnown RBP16.18■□□□□ 0.18
APEX1-205ENST00000553555 CDK8P49336 464 aa16.18■□□□□ 0.18
APEX1-205ENST00000553555 TCP10Q12799 353 aa16.18■□□□□ 0.18
APEX1-205ENST00000553555 C9orf131Q5VYM1 1079 aa16.18■□□□□ 0.18
APEX1-205ENST00000553555 MICALL2Q8IY33 904 aa16.18■□□□□ 0.18
APEX1-205ENST00000553555 ZNF274Q96GC6 653 aaPredicted RBP16.18■□□□□ 0.18
APEX1-205ENST00000553555 SLKQ9H2G2 1235 aaPredicted RBP16.18■□□□□ 0.18
APEX1-205ENST00000553555 DHX36Q9H2U1 1008 aaKnown RBP16.18■□□□□ 0.18
APEX1-205ENST00000553555 ZNF287Q9HBT7 754 aa16.18■□□□□ 0.18
APEX1-205ENST00000553555 TMOD2Q9NZR1 351 aa16.18■□□□□ 0.18
APEX1-205ENST00000553555 ANGEL1Q9UNK9 670 aaKnown RBP16.18■□□□□ 0.18
APEX1-205ENST00000553555 GRIN3BO60391 1043 aa16.17■□□□□ 0.18
APEX1-205ENST00000553555 LIFRP42702 1097 aa16.17■□□□□ 0.18
APEX1-205ENST00000553555 GABPAQ06546 454 aa16.17■□□□□ 0.18
APEX1-205ENST00000553555 NBPF9Q3BBW0 867 aa16.17■□□□□ 0.18
APEX1-205ENST00000553555 TMEM67Q5HYA8 995 aa16.17■□□□□ 0.18
APEX1-205ENST00000553555 FKBP1CQ5VVH2 108 aa16.17■□□□□ 0.18
APEX1-205ENST00000553555 SH3BP5LQ7L8J4 393 aa16.17■□□□□ 0.18
APEX1-205ENST00000553555 SLC44A5Q8NCS7 719 aa16.17■□□□□ 0.18
APEX1-205ENST00000553555 LY9Q9HBG7 655 aa16.17■□□□□ 0.18
APEX1-205ENST00000553555 CLRN2A0PK11 232 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 DDTLA6NHG4 134 aaPredicted RBP16.16■□□□□ 0.18
APEX1-205ENST00000553555 MYO1BO43795 1136 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 HLA-DOAP06340 250 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 ST3GAL1Q11201 340 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 SART3Q15020 963 aaKnown RBP16.16■□□□□ 0.18
APEX1-205ENST00000553555 FAM47AQ5JRC9 791 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 CCDC83Q8IWF9 413 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 ZNF444Q8N0Y2 327 aaPredicted RBP16.16■□□□□ 0.18
APEX1-205ENST00000553555 NECAB1Q8N987 351 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 ZKSCAN3Q9BRR0 538 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 EHD4Q9H223 541 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 BRPF3Q9ULD4 1205 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 COL2A1P02458 1487 aaPredicted RBP16.16■□□□□ 0.18
APEX1-205ENST00000553555 ERICH2A1L162 156 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 TCP10L2B9ZVM9 353 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 H7C1D1 291 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 PFKFB2O60825 505 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 EGFRP00533 1210 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 RASA1P20936 1047 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 PDIA3P30101 505 aaKnown RBP16.16■□□□□ 0.18
APEX1-205ENST00000553555 DDIT3P35638 169 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 STK3Q13188 491 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 SEC23AQ15436 765 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 RBM26Q5T8P6 1007 aaKnown RBP16.16■□□□□ 0.18
APEX1-205ENST00000553555 SAMD7Q7Z3H4 446 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 SGMS1Q86VZ5 419 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 IQCA1Q86XH1 822 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 TMTC2Q8N394 836 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 FAM151AQ8WW52 585 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 ZSCAN10Q96SZ4 725 aaPredicted RBP16.16■□□□□ 0.18
APEX1-205ENST00000553555 UBAC1Q9BSL1 405 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 SENP2Q9HC62 589 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 SERPINB13Q9UIV8 391 aa16.16■□□□□ 0.18
APEX1-205ENST00000553555 POLR2AP24928 1970 aaKnown RBP16.15■□□□□ 0.18
APEX1-205ENST00000553555 SRCAPQ6ZRS2 3230 aa16.15■□□□□ 0.18
APEX1-205ENST00000553555 ATRNL1Q5VV63 1379 aa16.15■□□□□ 0.18
APEX1-205ENST00000553555 KLF18A0A0U1RQI7 1052 aa16.15■□□□□ 0.18
APEX1-205ENST00000553555 TSPY2A6NKD2 308 aa16.15■□□□□ 0.18
APEX1-205ENST00000553555 TFAP4Q01664 338 aa16.15■□□□□ 0.18
APEX1-205ENST00000553555 WTAPQ15007 396 aa16.15■□□□□ 0.18
APEX1-205ENST00000553555 TBC1D10BQ4KMP7 808 aaPredicted RBP16.15■□□□□ 0.18
APEX1-205ENST00000553555 FOXP4Q8IVH2 680 aaPredicted RBP16.15■□□□□ 0.18
APEX1-205ENST00000553555 ZSCAN29Q8IWY8 852 aaPredicted RBP16.15■□□□□ 0.18
APEX1-205ENST00000553555 GTF3C6Q969F1 213 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms