RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC00517-201ENST00000553396 PPATQ06203 517 aa12.38□□□□□ -0.43
LINC00517-201ENST00000553396 CRHR2Q13324 411 aa12.38□□□□□ -0.43
LINC00517-201ENST00000553396 SNAPC2Q13487 334 aa12.38□□□□□ -0.43
LINC00517-201ENST00000553396 DGKZQ13574 1117 aa12.38□□□□□ -0.43
LINC00517-201ENST00000553396 OTUD7BQ6GQQ9 843 aa12.38□□□□□ -0.43
LINC00517-201ENST00000553396 SCYL3Q8IZE3 742 aa12.38□□□□□ -0.43
LINC00517-201ENST00000553396 ZNF296Q8WUU4 475 aaPredicted RBP12.38□□□□□ -0.43
LINC00517-201ENST00000553396 HAUS7Q99871 368 aa12.38□□□□□ -0.43
LINC00517-201ENST00000553396 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC00517-201ENST00000553396 PICK1Q9NRD5 415 aa12.38□□□□□ -0.43
LINC00517-201ENST00000553396 ECHDC1Q9NTX5 307 aa12.38□□□□□ -0.43
LINC00517-201ENST00000553396 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.38□□□□□ -0.43
LINC00517-201ENST00000553396 ZNF532Q9HCE3 1301 aa12.37□□□□□ -0.43
LINC00517-201ENST00000553396 DDX60LQ5H9U9 1706 aaKnown RBP12.37□□□□□ -0.43
LINC00517-201ENST00000553396 MAGEB6P1A0A0J9YX57 407 aa12.37□□□□□ -0.43
LINC00517-201ENST00000553396 GPR25O00155 361 aa12.37□□□□□ -0.43
LINC00517-201ENST00000553396 CETPP11597 493 aa12.37□□□□□ -0.43
LINC00517-201ENST00000553396 USP5P45974 858 aa12.37□□□□□ -0.43
LINC00517-201ENST00000553396 MAP3K10Q02779 954 aa12.37□□□□□ -0.43
LINC00517-201ENST00000553396 SLFNL1Q499Z3 407 aa12.37□□□□□ -0.43
LINC00517-201ENST00000553396 CCDC84Q86UT8 332 aaPredicted RBP12.37□□□□□ -0.43
LINC00517-201ENST00000553396 FAM43AQ8N2R8 423 aa12.37□□□□□ -0.43
LINC00517-201ENST00000553396 RIOK1Q9BRS2 568 aaKnown RBP12.37□□□□□ -0.43
LINC00517-201ENST00000553396 MCOLN1Q9GZU1 580 aa12.37□□□□□ -0.43
LINC00517-201ENST00000553396 PALD1Q9ULE6 856 aa12.37□□□□□ -0.43
LINC00517-201ENST00000553396 SUPT16HQ9Y5B9 1047 aaKnown RBP12.37□□□□□ -0.43
LINC00517-201ENST00000553396 TBC1D12O60347 775 aa12.36□□□□□ -0.43
LINC00517-201ENST00000553396 CTNND1O60716 968 aaKnown RBP12.36□□□□□ -0.43
LINC00517-201ENST00000553396 CHGBP05060 677 aa12.36□□□□□ -0.43
LINC00517-201ENST00000553396 PTPRAP18433 802 aa12.36□□□□□ -0.43
LINC00517-201ENST00000553396 TAF1CQ15572 869 aaPredicted RBP12.36□□□□□ -0.43
LINC00517-201ENST00000553396 CRACR2BQ8N4Y2 399 aaPredicted RBP12.36□□□□□ -0.43
LINC00517-201ENST00000553396 EXOC6Q8TAG9 804 aa12.36□□□□□ -0.43
LINC00517-201ENST00000553396 OTUD7AQ8TE49 926 aaPredicted RBP12.36□□□□□ -0.43
LINC00517-201ENST00000553396 ABHD8Q96I13 439 aa12.36□□□□□ -0.43
LINC00517-201ENST00000553396 GPATCH3Q96I76 525 aa12.36□□□□□ -0.43
LINC00517-201ENST00000553396 CFHR5Q9BXR6 569 aa12.36□□□□□ -0.43
LINC00517-201ENST00000553396 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC00517-201ENST00000553396 DHX36Q9H2U1 1008 aaKnown RBP12.36□□□□□ -0.43
LINC00517-201ENST00000553396 PI4KBQ9UBF8 816 aa12.36□□□□□ -0.43
LINC00517-201ENST00000553396 ZHX2Q9Y6X8 837 aa12.36□□□□□ -0.43
LINC00517-201ENST00000553396 BAZ2AQ9UIF9 1905 aaKnown RBP12.36□□□□□ -0.43
LINC00517-201ENST00000553396 TCRBV5S4A2TA0A5A2 114 aa12.35□□□□□ -0.43
LINC00517-201ENST00000553396 BTBD19C9JJ37 291 aa12.35□□□□□ -0.43
LINC00517-201ENST00000553396 HAX1O00165 279 aa12.35□□□□□ -0.43
LINC00517-201ENST00000553396 FKTNO75072 461 aa12.35□□□□□ -0.43
LINC00517-201ENST00000553396 RRP1BQ14684 758 aaKnown RBP12.35□□□□□ -0.43
LINC00517-201ENST00000553396 TMED8Q6PL24 325 aaPredicted RBP12.35□□□□□ -0.43
LINC00517-201ENST00000553396 CERS3Q8IU89 383 aa12.35□□□□□ -0.43
LINC00517-201ENST00000553396 LCORLQ8N3X6 602 aa12.35□□□□□ -0.43
LINC00517-201ENST00000553396 TRIM34Q9BYJ4 488 aa12.35□□□□□ -0.43
LINC00517-201ENST00000553396 DNAJC18Q9H819 358 aa12.35□□□□□ -0.43
LINC00517-201ENST00000553396 HERC5Q9UII4 1024 aaKnown RBP12.35□□□□□ -0.43
LINC00517-201ENST00000553396 KCNH4Q9UQ05 1017 aa12.35□□□□□ -0.43
LINC00517-201ENST00000553396 MYH8P13535 1937 aa12.35□□□□□ -0.43
LINC00517-201ENST00000553396 TRIM75PA6NK02 468 aa12.34□□□□□ -0.43
LINC00517-201ENST00000553396 MBD4O95243 580 aa12.34□□□□□ -0.43
LINC00517-201ENST00000553396 HLA-DOAP06340 250 aa12.34□□□□□ -0.43
LINC00517-201ENST00000553396 ADD2P35612 726 aa12.34□□□□□ -0.43
LINC00517-201ENST00000553396 HDAC1Q13547 482 aaPredicted RBP12.34□□□□□ -0.43
LINC00517-201ENST00000553396 NOM1Q5C9Z4 860 aaKnown RBP12.34□□□□□ -0.43
LINC00517-201ENST00000553396 ANKRD45Q5TZF3 282 aa12.34□□□□□ -0.43
LINC00517-201ENST00000553396 CTU1Q7Z7A3 348 aaKnown RBP12.34□□□□□ -0.43
LINC00517-201ENST00000553396 SDR42E1Q8WUS8 393 aa12.34□□□□□ -0.43
LINC00517-201ENST00000553396 CRNKL1Q9BZJ0 848 aaKnown RBP12.34□□□□□ -0.43
LINC00517-201ENST00000553396 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
LINC00517-201ENST00000553396 ZBTB47Q9UFB7 747 aaPredicted RBP12.34□□□□□ -0.43
LINC00517-201ENST00000553396 ZSWIM8A7E2V4 1837 aa12.34□□□□□ -0.43
LINC00517-201ENST00000553396 GDF11O95390 407 aa12.33□□□□□ -0.44
LINC00517-201ENST00000553396 CAP2P40123 477 aa12.33□□□□□ -0.44
LINC00517-201ENST00000553396 IRX6P78412 446 aaPredicted RBP12.33□□□□□ -0.44
LINC00517-201ENST00000553396 GCC1Q96CN9 775 aa12.33□□□□□ -0.44
LINC00517-201ENST00000553396 ZFYVE28Q9HCC9 887 aa12.33□□□□□ -0.44
LINC00517-201ENST00000553396 AFG3L2Q9Y4W6 797 aa12.33□□□□□ -0.44
LINC00517-201ENST00000553396 CCDC85CA6NKD9 419 aa12.32□□□□□ -0.44
LINC00517-201ENST00000553396 PDHXO00330 501 aa12.32□□□□□ -0.44
LINC00517-201ENST00000553396 CXCL11O14625 94 aa12.32□□□□□ -0.44
LINC00517-201ENST00000553396 POLR3DP05423 398 aaPredicted RBP12.32□□□□□ -0.44
LINC00517-201ENST00000553396 MX1P20591 662 aa12.32□□□□□ -0.44
LINC00517-201ENST00000553396 EVX2Q03828 476 aa12.32□□□□□ -0.44
LINC00517-201ENST00000553396 MOGSQ13724 837 aa12.32□□□□□ -0.44
LINC00517-201ENST00000553396 SHROOM1Q2M3G4 852 aaPredicted RBP12.32□□□□□ -0.44
LINC00517-201ENST00000553396 GADL1Q6ZQY3 521 aa12.32□□□□□ -0.44
LINC00517-201ENST00000553396 FOXP4Q8IVH2 680 aaPredicted RBP12.32□□□□□ -0.44
LINC00517-201ENST00000553396 PI4K2BQ8TCG2 481 aa12.32□□□□□ -0.44
LINC00517-201ENST00000553396 MCM9Q9NXL9 1143 aa12.32□□□□□ -0.44
LINC00517-201ENST00000553396 TTC41PQ6P2S7 1318 aa12.32□□□□□ -0.44
LINC00517-201ENST00000553396 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 A0A0G2JLL6 359 aaPredicted RBP12.31□□□□□ -0.44
LINC00517-201ENST00000553396 ERC2O15083 957 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 PRKAB2O43741 272 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 PLCD1P51178 756 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 JAG1P78504 1218 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 AAMPQ13685 434 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 UBE3CQ15386 1083 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 ZSCAN25Q6NSZ9 544 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 PRRT2Q7Z6L0 340 aaPredicted RBP12.31□□□□□ -0.44
LINC00517-201ENST00000553396 ANKRD23Q86SG2 305 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms