RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 FRAT1Q92837 279 aaPredicted RBP11.55□□□□□ -0.56
CHD8-203ENST00000553283 CLUAP1Q96AJ1 413 aa11.55□□□□□ -0.56
CHD8-203ENST00000553283 UNC93B1Q9H1C4 597 aa11.55□□□□□ -0.56
CHD8-203ENST00000553283 LRP2BPQ9P2M1 347 aa11.55□□□□□ -0.56
CHD8-203ENST00000553283 TRIOBPQ9H2D6 2365 aa11.55□□□□□ -0.56
CHD8-203ENST00000553283 SGPL1O95470 568 aa11.54□□□□□ -0.56
CHD8-203ENST00000553283 CAP2P40123 477 aa11.54□□□□□ -0.56
CHD8-203ENST00000553283 RRP1BQ14684 758 aaKnown RBP11.54□□□□□ -0.56
CHD8-203ENST00000553283 TEX11Q8IYF3 940 aa11.54□□□□□ -0.56
CHD8-203ENST00000553283 ANKRD13CQ8N6S4 541 aa11.54□□□□□ -0.56
CHD8-203ENST00000553283 ZNF280CQ8ND82 737 aa11.54□□□□□ -0.56
CHD8-203ENST00000553283 HTATIP2Q9BUP3 242 aa11.54□□□□□ -0.56
CHD8-203ENST00000553283 TBC1D2Q9BYX2 928 aa11.54□□□□□ -0.56
CHD8-203ENST00000553283 GPR108Q9NPR9 543 aa11.54□□□□□ -0.56
CHD8-203ENST00000553283 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
CHD8-203ENST00000553283 COL2A1P02458 1487 aaPredicted RBP11.53□□□□□ -0.56
CHD8-203ENST00000553283 USP17L5A8MUK1 530 aa11.53□□□□□ -0.56
CHD8-203ENST00000553283 BAG3O95817 575 aa11.53□□□□□ -0.56
CHD8-203ENST00000553283 ELNP15502 786 aa11.53□□□□□ -0.56
CHD8-203ENST00000553283 CAPN2P17655 700 aa11.53□□□□□ -0.56
CHD8-203ENST00000553283 PPP4CP60510 307 aa11.53□□□□□ -0.56
CHD8-203ENST00000553283 ATP8B2P98198 1209 aa11.53□□□□□ -0.56
CHD8-203ENST00000553283 POLA2Q14181 598 aa11.53□□□□□ -0.56
CHD8-203ENST00000553283 FAM110CQ1W6H9 321 aa11.53□□□□□ -0.56
CHD8-203ENST00000553283 SH3RF3Q8TEJ3 882 aaPredicted RBP11.53□□□□□ -0.56
CHD8-203ENST00000553283 COA7Q96BR5 231 aa11.53□□□□□ -0.56
CHD8-203ENST00000553283 NOL10Q9BSC4 688 aaKnown RBP11.53□□□□□ -0.56
CHD8-203ENST00000553283 DHX36Q9H2U1 1008 aaKnown RBP11.53□□□□□ -0.56
CHD8-203ENST00000553283 SNRKQ9NRH2 765 aa11.53□□□□□ -0.56
CHD8-203ENST00000553283 PI4KBQ9UBF8 816 aa11.53□□□□□ -0.56
CHD8-203ENST00000553283 HERC5Q9UII4 1024 aaKnown RBP11.53□□□□□ -0.56
CHD8-203ENST00000553283 DOCK2Q92608 1830 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 FARP2O94887 1054 aaPredicted RBP11.52□□□□□ -0.57
CHD8-203ENST00000553283 INHAP05111 366 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 PLCG2P16885 1265 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 GCLCP48506 637 aaPredicted RBP11.52□□□□□ -0.57
CHD8-203ENST00000553283 HMGCS2P54868 508 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 PABPC4Q13310 644 aaKnown RBP eCLIP11.52□□□□□ -0.57
CHD8-203ENST00000553283 TNNI3KQ59H18 835 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 SH3D19Q5HYK7 790 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 CCDC158Q5M9N0 1113 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 TTC39AQ5SRH9 613 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 ZKSCAN2Q63HK3 967 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 NAA16Q6N069 864 aaPredicted RBP11.52□□□□□ -0.57
CHD8-203ENST00000553283 CHRDL2Q6WN34 429 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 TMEM57Q8N5G2 664 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 SSH3Q8TE77 659 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 AS3MTQ9HBK9 375 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 AATFQ9NY61 560 aaKnown RBP eCLIP11.52□□□□□ -0.57
CHD8-203ENST00000553283 NR2E3Q9Y5X4 410 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 FPGT-TNNI3KV9GXZ4 949 aa11.52□□□□□ -0.57
CHD8-203ENST00000553283 IGSF3O75054 1194 aa11.51□□□□□ -0.57
CHD8-203ENST00000553283 TFRCP02786 760 aaKnown RBP11.51□□□□□ -0.57
CHD8-203ENST00000553283 OS9Q13438 667 aaPredicted RBP11.51□□□□□ -0.57
CHD8-203ENST00000553283 FOXP4Q8IVH2 680 aaPredicted RBP11.51□□□□□ -0.57
CHD8-203ENST00000553283 ZNF512BQ96KM6 892 aaPredicted RBP11.51□□□□□ -0.57
CHD8-203ENST00000553283 DEFB118Q96PH6 123 aa11.51□□□□□ -0.57
CHD8-203ENST00000553283 DBNDD2Q9BQY9 259 aa11.51□□□□□ -0.57
CHD8-203ENST00000553283 WDR18Q9BV38 432 aa11.51□□□□□ -0.57
CHD8-203ENST00000553283 ASCC2Q9H1I8 757 aaPredicted RBP11.51□□□□□ -0.57
CHD8-203ENST00000553283 PAK6Q9NQU5 681 aaPredicted RBP11.51□□□□□ -0.57
CHD8-203ENST00000553283 TAOK2Q9UL54 1235 aa11.51□□□□□ -0.57
CHD8-203ENST00000553283 SURF6O75683 361 aaKnown RBP11.5□□□□□ -0.57
CHD8-203ENST00000553283 CYP2E1P05181 493 aaPredicted RBP11.5□□□□□ -0.57
CHD8-203ENST00000553283 ASNSP08243 561 aa11.5□□□□□ -0.57
CHD8-203ENST00000553283 ADGRA1Q86SQ6 560 aa11.5□□□□□ -0.57
CHD8-203ENST00000553283 METTL16Q86W50 562 aaKnown RBP11.5□□□□□ -0.57
CHD8-203ENST00000553283 MAPKAPK5Q8IW41 473 aa11.5□□□□□ -0.57
CHD8-203ENST00000553283 TGFBRAP1Q8WUH2 860 aa11.5□□□□□ -0.57
CHD8-203ENST00000553283 CRISPLD2Q9H0B8 497 aa11.5□□□□□ -0.57
CHD8-203ENST00000553283 RBM27Q9P2N5 1060 aaKnown RBP11.5□□□□□ -0.57
CHD8-203ENST00000553283 GJD2Q9UKL4 321 aa11.5□□□□□ -0.57
CHD8-203ENST00000553283 NOP58Q9Y2X3 529 aaKnown RBP11.5□□□□□ -0.57
CHD8-203ENST00000553283 DOCK1Q14185 1865 aa11.49□□□□□ -0.57
CHD8-203ENST00000553283 C19orf81C9J6K1 198 aa11.49□□□□□ -0.57
CHD8-203ENST00000553283 ZBTB7BO15156 539 aaPredicted RBP11.49□□□□□ -0.57
CHD8-203ENST00000553283 HOXA7P31268 230 aaPredicted RBP11.49□□□□□ -0.57
CHD8-203ENST00000553283 BACE1P56817 501 aa11.49□□□□□ -0.57
CHD8-203ENST00000553283 JAG1P78504 1218 aa11.49□□□□□ -0.57
CHD8-203ENST00000553283 P2RX7Q99572 595 aaKnown RBP11.49□□□□□ -0.57
CHD8-203ENST00000553283 GINM1Q9NU53 330 aa11.49□□□□□ -0.57
CHD8-203ENST00000553283 TMOD4Q9NZQ9 345 aa11.49□□□□□ -0.57
CHD8-203ENST00000553283 MORF4L1Q9UBU8 362 aa11.49□□□□□ -0.57
CHD8-203ENST00000553283 PALD1Q9ULE6 856 aa11.49□□□□□ -0.57
CHD8-203ENST00000553283 PHIPQ8WWQ0 1821 aa11.49□□□□□ -0.57
CHD8-203ENST00000553283 EVI5O60447 810 aa11.48□□□□□ -0.57
CHD8-203ENST00000553283 HMGCRP04035 888 aa11.48□□□□□ -0.57
CHD8-203ENST00000553283 ZAP70P43403 619 aa11.48□□□□□ -0.57
CHD8-203ENST00000553283 IRX3P78415 501 aaPredicted RBP11.48□□□□□ -0.57
CHD8-203ENST00000553283 MTMR2Q13614 643 aa11.48□□□□□ -0.57
CHD8-203ENST00000553283 CRACR2BQ8N4Y2 399 aaPredicted RBP11.48□□□□□ -0.57
CHD8-203ENST00000553283 TRIM34Q9BYJ4 488 aa11.48□□□□□ -0.57
CHD8-203ENST00000553283 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD8-203ENST00000553283 PRO3102Q9H379 93 aa11.48□□□□□ -0.57
CHD8-203ENST00000553283 DNAJC18Q9H819 358 aa11.48□□□□□ -0.57
CHD8-203ENST00000553283 PIH1D3Q9NQM4 214 aaKnown RBP11.48□□□□□ -0.57
CHD8-203ENST00000553283 FLT1P17948 1338 aa11.48□□□□□ -0.57
CHD8-203ENST00000553283 MGAMO43451 1857 aa11.48□□□□□ -0.57
CHD8-203ENST00000553283 PTPRFP10586 1907 aa11.48□□□□□ -0.57
CHD8-203ENST00000553283 USP17L10C9JJH3 530 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms