RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.25□□□□□ -0.93
NPAS3-213ENST00000552874 PHF12Q96QT6 1004 aa9.25□□□□□ -0.93
NPAS3-213ENST00000552874 HELLSQ9NRZ9 838 aa9.25□□□□□ -0.93
NPAS3-213ENST00000552874 TMOD2Q9NZR1 351 aa9.25□□□□□ -0.93
NPAS3-213ENST00000552874 ZNF112Q9UJU3 913 aa9.25□□□□□ -0.93
NPAS3-213ENST00000552874 TLL2Q9Y6L7 1015 aa9.25□□□□□ -0.93
NPAS3-213ENST00000552874 CCDC171Q6TFL3 1326 aa9.25□□□□□ -0.93
NPAS3-213ENST00000552874 MGAMO43451 1857 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 PHF20L1A8MW92 1017 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 TRIM6-TRIM34B2RNG4 842 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 CELF2O95319 508 aaKnown RBP9.24□□□□□ -0.93
NPAS3-213ENST00000552874 CYP2D6P10635 497 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 HSPA6P17066 643 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 PICALMQ13492 652 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 LDLRAD1Q5T700 205 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 SAPCD2Q86UD0 394 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 RILPL2Q969X0 211 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 CRNKL1Q9BZJ0 848 aaKnown RBP9.24□□□□□ -0.93
NPAS3-213ENST00000552874 NBPF3Q9H094 633 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 EHD4Q9H223 541 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 TACC3Q9Y6A5 838 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 ZSWIM8A7E2V4 1837 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 BRCA2P51587 3418 aa9.24□□□□□ -0.93
NPAS3-213ENST00000552874 MYH6P13533 1939 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 RASSF10A6NK89 507 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 SGSM2O43147 1006 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 TBC1D12O60347 775 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 USP2O75604 605 aaPredicted RBP9.23□□□□□ -0.93
NPAS3-213ENST00000552874 TNNI2P48788 182 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 PLCD1P51178 756 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 FKBP1BP68106 108 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 HTRA3P83110 453 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 SHROOM1Q2M3G4 852 aaPredicted RBP9.23□□□□□ -0.93
NPAS3-213ENST00000552874 MCMDC2Q4G0Z9 681 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 NOL9Q5SY16 702 aaKnown RBP9.23□□□□□ -0.93
NPAS3-213ENST00000552874 GIMAP6Q6P9H5 292 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.23□□□□□ -0.93
NPAS3-213ENST00000552874 AIDAQ96BJ3 306 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 KLRG1Q96E93 195 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 CSRNP1Q96S65 589 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 GBA2Q9HCG7 927 aaPredicted RBP9.23□□□□□ -0.93
NPAS3-213ENST00000552874 ATP8A2Q9NTI2 1148 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 PALD1Q9ULE6 856 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 GTF3C3Q9Y5Q9 886 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 PLIN4Q96Q06 1357 aa9.23□□□□□ -0.93
NPAS3-213ENST00000552874 CYP2D7A0A087X1C5 515 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 TMEM88BA6NKF7 163 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 FAM196BA6NMK8 535 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 FAM155AB1AL88 458 aaPredicted RBP9.22□□□□□ -0.93
NPAS3-213ENST00000552874 HIP1O00291 1037 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 HSPD1P10809 573 aaKnown RBP9.22□□□□□ -0.93
NPAS3-213ENST00000552874 SHMT1P34896 483 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 GJA5P36382 358 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 JAG1P78504 1218 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 ALX1Q15699 326 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 LRRFIP1Q32MZ4 808 aaKnown RBP9.22□□□□□ -0.93
NPAS3-213ENST00000552874 SBK1Q52WX2 424 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 C12orf60Q5U649 245 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 LHX8Q68G74 356 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 CTR9Q6PD62 1173 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 RASAL3Q86YV0 1011 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 NKX2-3Q8TAU0 364 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 HHIPL1Q96JK4 782 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 CLMNQ96JQ2 1002 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 DCBLD2Q96PD2 775 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 NOL10Q9BSC4 688 aaKnown RBP9.22□□□□□ -0.93
NPAS3-213ENST00000552874 ESYT1Q9BSJ8 1104 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 DHX36Q9H2U1 1008 aaKnown RBP9.22□□□□□ -0.93
NPAS3-213ENST00000552874 SAP30BPQ9UHR5 308 aaKnown RBP9.22□□□□□ -0.93
NPAS3-213ENST00000552874 SNCAIPQ9Y6H5 919 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 SLC4A4Q9Y6R1 1079 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 SMCHD1A6NHR9 2005 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 DOCK3Q8IZD9 2030 aa9.22□□□□□ -0.93
NPAS3-213ENST00000552874 SLC10A3P09131 477 aa9.21□□□□□ -0.94
NPAS3-213ENST00000552874 GNAT2P19087 354 aa9.21□□□□□ -0.94
NPAS3-213ENST00000552874 VGLL4Q14135 290 aa9.21□□□□□ -0.94
NPAS3-213ENST00000552874 TATDN1Q6P1N9 297 aa9.21□□□□□ -0.94
NPAS3-213ENST00000552874 CWC27Q6UX04 472 aaKnown RBP9.21□□□□□ -0.94
NPAS3-213ENST00000552874 C16orf86Q6ZW13 317 aa9.21□□□□□ -0.94
NPAS3-213ENST00000552874 IFNL3Q8IZI9 196 aa9.21□□□□□ -0.94
NPAS3-213ENST00000552874 LSG1Q9H089 658 aaKnown RBP9.21□□□□□ -0.94
NPAS3-213ENST00000552874 DIAPH3Q9NSV4 1193 aa9.21□□□□□ -0.94
NPAS3-213ENST00000552874 ARPP21Q9UBL0 812 aaPredicted RBP9.21□□□□□ -0.94
NPAS3-213ENST00000552874 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.21□□□□□ -0.94
NPAS3-213ENST00000552874 RBBP6Q7Z6E9 1792 aaKnown RBP9.21□□□□□ -0.94
NPAS3-213ENST00000552874 PLXNB2O15031 1838 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 UNCXA6NJT0 531 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 PATL2C9JE40 543 aaKnown RBP9.2□□□□□ -0.94
NPAS3-213ENST00000552874 USP17L12C9JPN9 530 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 USP17L21D6R901 530 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 CDC45O75419 566 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 INPP5BP32019 993 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 USP5P45974 858 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 PTH1RQ03431 593 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 SLC4A8Q2Y0W8 1093 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 SUPT20HL1Q3ZLR7 823 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 MIGA2Q7L4E1 593 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 TBC1D10CQ8IV04 446 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 DNAJC5GQ8N7S2 189 aa9.2□□□□□ -0.94
NPAS3-213ENST00000552874 SLC44A5Q8NCS7 719 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms