RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 TTF2Q9UNY4 1162 aaKnown RBP13.29□□□□□ -0.28
CACNB3-224ENST00000552812 PSME4Q14997 1843 aa13.29□□□□□ -0.28
CACNB3-224ENST00000552812 MINDY4BA8MYZ0 360 aa13.28□□□□□ -0.28
CACNB3-224ENST00000552812 B4E1Z4 1266 aa13.28□□□□□ -0.28
CACNB3-224ENST00000552812 USP17L12C9JPN9 530 aa13.28□□□□□ -0.28
CACNB3-224ENST00000552812 USP17L21D6R901 530 aa13.28□□□□□ -0.28
CACNB3-224ENST00000552812 USP5P45974 858 aa13.28□□□□□ -0.28
CACNB3-224ENST00000552812 HDLBPQ00341 1268 aaKnown RBP13.28□□□□□ -0.28
CACNB3-224ENST00000552812 HHIPL2Q6UWX4 724 aa13.28□□□□□ -0.28
CACNB3-224ENST00000552812 CCDC83Q8IWF9 413 aa13.28□□□□□ -0.28
CACNB3-224ENST00000552812 SH3RF3Q8TEJ3 882 aaPredicted RBP13.28□□□□□ -0.28
CACNB3-224ENST00000552812 GTF3C6Q969F1 213 aa13.28□□□□□ -0.28
CACNB3-224ENST00000552812 LRRC2Q9BYS8 371 aa13.28□□□□□ -0.28
CACNB3-224ENST00000552812 DAGLAQ9Y4D2 1042 aa13.28□□□□□ -0.28
CACNB3-224ENST00000552812 SLC3A2P08195 630 aaKnown RBP13.27□□□□□ -0.28
CACNB3-224ENST00000552812 PSEN1P49768 467 aa13.27□□□□□ -0.28
CACNB3-224ENST00000552812 ST3GAL1Q11201 340 aa13.27□□□□□ -0.28
CACNB3-224ENST00000552812 CHST3Q7LGC8 479 aa13.27□□□□□ -0.28
CACNB3-224ENST00000552812 AMOTL1Q8IY63 956 aa13.27□□□□□ -0.28
CACNB3-224ENST00000552812 ANGEL1Q9UNK9 670 aaKnown RBP13.27□□□□□ -0.28
CACNB3-224ENST00000552812 SMC3Q9UQE7 1217 aa13.27□□□□□ -0.28
CACNB3-224ENST00000552812 NAV1Q8NEY1 1877 aa13.27□□□□□ -0.28
CACNB3-224ENST00000552812 CDK5RAP2Q96SN8 1893 aa13.27□□□□□ -0.28
CACNB3-224ENST00000552812 FER1L6Q2WGJ9 1857 aa13.27□□□□□ -0.29
CACNB3-224ENST00000552812 PFKFB2O60825 505 aa13.27□□□□□ -0.29
CACNB3-224ENST00000552812 PDIA4P13667 645 aaKnown RBP13.27□□□□□ -0.29
CACNB3-224ENST00000552812 RHBDL3P58872 404 aa13.27□□□□□ -0.29
CACNB3-224ENST00000552812 CYB5R4Q7L1T6 521 aa13.27□□□□□ -0.29
CACNB3-224ENST00000552812 ESR2Q92731 530 aa13.27□□□□□ -0.29
CACNB3-224ENST00000552812 TEKT1Q969V4 418 aa13.27□□□□□ -0.29
CACNB3-224ENST00000552812 MCM9Q9NXL9 1143 aa13.27□□□□□ -0.29
CACNB3-224ENST00000552812 ZSWIM5Q9P217 1185 aa13.27□□□□□ -0.29
CACNB3-224ENST00000552812 PPP1R1BQ9UD71 204 aaPredicted RBP13.27□□□□□ -0.29
CACNB3-224ENST00000552812 FOCADQ5VW36 1801 aa13.27□□□□□ -0.29
CACNB3-224ENST00000552812 MYO3BQ8WXR4 1341 aa13.26□□□□□ -0.29
CACNB3-224ENST00000552812 DDX60LQ5H9U9 1706 aaKnown RBP13.26□□□□□ -0.29
CACNB3-224ENST00000552812 ROBO3Q96MS0 1386 aa13.26□□□□□ -0.29
CACNB3-224ENST00000552812 KDM4AO75164 1064 aa13.26□□□□□ -0.29
CACNB3-224ENST00000552812 APOBRQ0VD83 1088 aa13.26□□□□□ -0.29
CACNB3-224ENST00000552812 SART3Q15020 963 aaKnown RBP13.26□□□□□ -0.29
CACNB3-224ENST00000552812 C12orf60Q5U649 245 aa13.26□□□□□ -0.29
CACNB3-224ENST00000552812 TEX11Q8IYF3 940 aa13.26□□□□□ -0.29
CACNB3-224ENST00000552812 LARGE2Q8N3Y3 721 aa13.26□□□□□ -0.29
CACNB3-224ENST00000552812 NECAB1Q8N987 351 aa13.26□□□□□ -0.29
CACNB3-224ENST00000552812 LLPHQ9BRT6 129 aaKnown RBP13.26□□□□□ -0.29
CACNB3-224ENST00000552812 KCNQ5Q9NR82 932 aa13.26□□□□□ -0.29
CACNB3-224ENST00000552812 TACC3Q9Y6A5 838 aa13.26□□□□□ -0.29
CACNB3-224ENST00000552812 YDJCA8MPS7 323 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 F8W031 263 aaPredicted RBP13.25□□□□□ -0.29
CACNB3-224ENST00000552812 SH2B2O14492 632 aaPredicted RBP13.25□□□□□ -0.29
CACNB3-224ENST00000552812 ORC4O43929 436 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 PDIA3P30101 505 aaKnown RBP13.25□□□□□ -0.29
CACNB3-224ENST00000552812 LIFRP42702 1097 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 PDE4BQ07343 736 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 NFKBIBQ15653 356 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 SGMS1Q86VZ5 419 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 IGDCC4Q8TDY8 1250 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 TGFBRAP1Q8WUH2 860 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 ZDHHC15Q96MV8 337 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 MXD3Q9BW11 206 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 TAOK3Q9H2K8 898 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 ZNF277Q9NRM2 450 aaPredicted RBP13.25□□□□□ -0.29
CACNB3-224ENST00000552812 TOMM22Q9NS69 142 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.25□□□□□ -0.29
CACNB3-224ENST00000552812 CYP2D7A0A087X1C5 515 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 IARSP41252 1262 aaKnown RBP13.25□□□□□ -0.29
CACNB3-224ENST00000552812 SCRN1Q12765 414 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 STK3Q13188 491 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 RRP12Q5JTH9 1297 aaKnown RBP13.25□□□□□ -0.29
CACNB3-224ENST00000552812 CLEC17AQ6ZS10 378 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 TMTC2Q8N394 836 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 TNPO1Q92973 898 aaKnown RBP13.25□□□□□ -0.29
CACNB3-224ENST00000552812 SPON1Q9HCB6 807 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 INCENPQ9NQS7 918 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 SERPINA10Q9UK55 444 aa13.25□□□□□ -0.29
CACNB3-224ENST00000552812 FLT1P17948 1338 aa13.24□□□□□ -0.29
CACNB3-224ENST00000552812 ERICH2A1L162 156 aa13.24□□□□□ -0.29
CACNB3-224ENST00000552812 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
CACNB3-224ENST00000552812 GJB2P29033 226 aa13.24□□□□□ -0.29
CACNB3-224ENST00000552812 CRKP46108 304 aa13.24□□□□□ -0.29
CACNB3-224ENST00000552812 TMEM67Q5HYA8 995 aa13.24□□□□□ -0.29
CACNB3-224ENST00000552812 KIAA0825Q8IV33 1275 aa13.24□□□□□ -0.29
CACNB3-224ENST00000552812 NIM1KQ8IY84 436 aa13.24□□□□□ -0.29
CACNB3-224ENST00000552812 NKX2-3Q8TAU0 364 aa13.24□□□□□ -0.29
CACNB3-224ENST00000552812 LTBP3Q9NS15 1303 aa13.24□□□□□ -0.29
CACNB3-224ENST00000552812 ARFGEF1Q9Y6D6 1849 aa13.23□□□□□ -0.29
CACNB3-224ENST00000552812 COL4A5P29400 1685 aa13.23□□□□□ -0.29
CACNB3-224ENST00000552812 KLF18A0A0U1RQI7 1052 aa13.23□□□□□ -0.29
CACNB3-224ENST00000552812 IFIT3O14879 490 aaKnown RBP13.23□□□□□ -0.29
CACNB3-224ENST00000552812 DHX16O60231 1041 aaKnown RBP13.23□□□□□ -0.29
CACNB3-224ENST00000552812 BRD1O95696 1058 aa13.23□□□□□ -0.29
CACNB3-224ENST00000552812 PDCP20941 246 aa13.23□□□□□ -0.29
CACNB3-224ENST00000552812 SCNN1DP51172 638 aa13.23□□□□□ -0.29
CACNB3-224ENST00000552812 PKP1Q13835 747 aa13.23□□□□□ -0.29
CACNB3-224ENST00000552812 APOBEC3HQ6NTF7 200 aaKnown RBP13.23□□□□□ -0.29
CACNB3-224ENST00000552812 MAPKAPK5Q8IW41 473 aa13.23□□□□□ -0.29
CACNB3-224ENST00000552812 GBP4Q96PP9 640 aa13.23□□□□□ -0.29
CACNB3-224ENST00000552812 UBAC1Q9BSL1 405 aa13.23□□□□□ -0.29
CACNB3-224ENST00000552812 LY9Q9HBG7 655 aa13.23□□□□□ -0.29
CACNB3-224ENST00000552812 ZNF287Q9HBT7 754 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms