RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 IRF6O14896 467 aa10.96□□□□□ -0.65
PRIM1-208ENST00000552590 ATP2B4P23634 1241 aa10.96□□□□□ -0.65
PRIM1-208ENST00000552590 PRKAR2BP31323 418 aa10.96□□□□□ -0.65
PRIM1-208ENST00000552590 EIF4A1P60842 406 aaKnown RBP10.96□□□□□ -0.65
PRIM1-208ENST00000552590 AIMP1Q12904 312 aaKnown RBP10.96□□□□□ -0.65
PRIM1-208ENST00000552590 SNAPC2Q13487 334 aa10.96□□□□□ -0.65
PRIM1-208ENST00000552590 LBHD1Q9BQE6 289 aaPredicted RBP10.96□□□□□ -0.65
PRIM1-208ENST00000552590 THEGQ9P2T0 379 aa10.96□□□□□ -0.65
PRIM1-208ENST00000552590 SPDYE16A6NNV3 312 aaPredicted RBP10.95□□□□□ -0.66
PRIM1-208ENST00000552590 MRPS5P82675 430 aaKnown RBP10.95□□□□□ -0.66
PRIM1-208ENST00000552590 GRIN2CQ14957 1233 aa10.95□□□□□ -0.66
PRIM1-208ENST00000552590 SHHQ15465 462 aa10.95□□□□□ -0.66
PRIM1-208ENST00000552590 TTC13Q8NBP0 860 aa10.95□□□□□ -0.66
PRIM1-208ENST00000552590 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.95□□□□□ -0.66
PRIM1-208ENST00000552590 PRMT6Q96LA8 375 aaPredicted RBP10.95□□□□□ -0.66
PRIM1-208ENST00000552590 PDHXO00330 501 aa10.94□□□□□ -0.66
PRIM1-208ENST00000552590 MYO1BO43795 1136 aa10.94□□□□□ -0.66
PRIM1-208ENST00000552590 ADH1BP00325 375 aa10.94□□□□□ -0.66
PRIM1-208ENST00000552590 LRRC26Q2I0M4 334 aa10.94□□□□□ -0.66
PRIM1-208ENST00000552590 TMEM31Q5JXX7 168 aa10.94□□□□□ -0.66
PRIM1-208ENST00000552590 C9orf50Q5SZB4 431 aa10.94□□□□□ -0.66
PRIM1-208ENST00000552590 COPS6Q7L5N1 327 aa10.94□□□□□ -0.66
PRIM1-208ENST00000552590 MTMR14Q8NCE2 650 aa10.94□□□□□ -0.66
PRIM1-208ENST00000552590 IL27Q8NEV9 243 aa10.94□□□□□ -0.66
PRIM1-208ENST00000552590 CHD9Q3L8U1 2897 aa10.94□□□□□ -0.66
PRIM1-208ENST00000552590 BCRP11274 1271 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 GTF2IP78347 998 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 SMAD3P84022 425 aaKnown RBP10.93□□□□□ -0.66
PRIM1-208ENST00000552590 IRF5Q13568 498 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 CFAP100Q494V2 611 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 TXNRD3Q86VQ6 643 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 ERO1BQ86YB8 467 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 CDHR5Q9HBB8 845 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 KNSTRNQ9Y448 316 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 SNCAIPQ9Y6H5 919 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 MED23Q9ULK4 1368 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 CACNA1BQ00975 2339 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 F8W031 263 aaPredicted RBP10.93□□□□□ -0.66
PRIM1-208ENST00000552590 IRS4O14654 1257 aaPredicted RBP10.93□□□□□ -0.66
PRIM1-208ENST00000552590 EIF2S2P20042 333 aaKnown RBP10.93□□□□□ -0.66
PRIM1-208ENST00000552590 ANKRD23Q86SG2 305 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 XAGE3Q8WTP9 111 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 TEPSINQ96N21 525 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 COA1Q9GZY4 146 aa10.93□□□□□ -0.66
PRIM1-208ENST00000552590 PPIL2Q13356 520 aa10.92□□□□□ -0.66
PRIM1-208ENST00000552590 E2F4Q16254 413 aa10.92□□□□□ -0.66
PRIM1-208ENST00000552590 CYP4X1Q8N118 509 aa10.92□□□□□ -0.66
PRIM1-208ENST00000552590 CERS5Q8N5B7 392 aa10.92□□□□□ -0.66
PRIM1-208ENST00000552590 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.92□□□□□ -0.66
PRIM1-208ENST00000552590 ZBTB38Q8NAP3 1195 aaPredicted RBP10.92□□□□□ -0.66
PRIM1-208ENST00000552590 ZKSCAN4Q969J2 545 aaPredicted RBP10.92□□□□□ -0.66
PRIM1-208ENST00000552590 CCDC85AQ96PX6 553 aaPredicted RBP10.92□□□□□ -0.66
PRIM1-208ENST00000552590 RSPH6AQ9H0K4 717 aa10.92□□□□□ -0.66
PRIM1-208ENST00000552590 OGDHLQ9ULD0 1010 aa10.92□□□□□ -0.66
PRIM1-208ENST00000552590 COL3A1P02461 1466 aaPredicted RBP10.92□□□□□ -0.66
PRIM1-208ENST00000552590 FAM86C2PA6NEL3 165 aa10.91□□□□□ -0.66
PRIM1-208ENST00000552590 ATP5J2-PTCD1G3V325 749 aa10.91□□□□□ -0.66
PRIM1-208ENST00000552590 TNPO2O14787 897 aaKnown RBP10.91□□□□□ -0.66
PRIM1-208ENST00000552590 CYP2C8P10632 490 aa10.91□□□□□ -0.66
PRIM1-208ENST00000552590 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
PRIM1-208ENST00000552590 TRIM32Q13049 653 aa10.91□□□□□ -0.66
PRIM1-208ENST00000552590 SLC6A16Q9GZN6 736 aa10.91□□□□□ -0.66
PRIM1-208ENST00000552590 C5orf42Q9H799 3197 aa10.9□□□□□ -0.66
PRIM1-208ENST00000552590 COL6A1P12109 1028 aa10.9□□□□□ -0.66
PRIM1-208ENST00000552590 PDE3AQ14432 1141 aa10.9□□□□□ -0.66
PRIM1-208ENST00000552590 TMEM39BQ9GZU3 492 aa10.9□□□□□ -0.66
PRIM1-208ENST00000552590 HMX1Q9NP08 348 aaPredicted RBP10.9□□□□□ -0.66
PRIM1-208ENST00000552590 C11orf16Q9NQ32 467 aa10.9□□□□□ -0.66
PRIM1-208ENST00000552590 CHD7Q9P2D1 2997 aa10.9□□□□□ -0.67
PRIM1-208ENST00000552590 KLRK1P26718 216 aa10.89□□□□□ -0.67
PRIM1-208ENST00000552590 RBM5P52756 815 aaKnown RBP eCLIP10.89□□□□□ -0.67
PRIM1-208ENST00000552590 PNISRQ8TF01 805 aaKnown RBP10.89□□□□□ -0.67
PRIM1-208ENST00000552590 PARK7Q99497 189 aaKnown RBP10.89□□□□□ -0.67
PRIM1-208ENST00000552590 ACTN4O43707 911 aaKnown RBP10.88□□□□□ -0.67
PRIM1-208ENST00000552590 HTATSF1O43719 755 aaKnown RBP10.88□□□□□ -0.67
PRIM1-208ENST00000552590 CCT4P50991 539 aaKnown RBP10.88□□□□□ -0.67
PRIM1-208ENST00000552590 MOGSQ13724 837 aa10.88□□□□□ -0.67
PRIM1-208ENST00000552590 TNFAIP1Q13829 316 aa10.88□□□□□ -0.67
PRIM1-208ENST00000552590 CCDC85BQ15834 202 aaPredicted RBP10.88□□□□□ -0.67
PRIM1-208ENST00000552590 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
PRIM1-208ENST00000552590 ANKRD18AQ8IVF6 992 aa10.88□□□□□ -0.67
PRIM1-208ENST00000552590 WRNIP1Q96S55 665 aa10.88□□□□□ -0.67
PRIM1-208ENST00000552590 ISCA1Q9BUE6 129 aa10.88□□□□□ -0.67
PRIM1-208ENST00000552590 ZNF70Q9UC06 446 aaPredicted RBP10.88□□□□□ -0.67
PRIM1-208ENST00000552590 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
PRIM1-208ENST00000552590 TCP10L2B9ZVM9 353 aa10.87□□□□□ -0.67
PRIM1-208ENST00000552590 GPR37L1O60883 481 aa10.87□□□□□ -0.67
PRIM1-208ENST00000552590 HMGCRP04035 888 aa10.87□□□□□ -0.67
PRIM1-208ENST00000552590 BMP1P13497 986 aa10.87□□□□□ -0.67
PRIM1-208ENST00000552590 MINPP1Q9UNW1 487 aa10.87□□□□□ -0.67
PRIM1-208ENST00000552590 LTBP2Q14767 1821 aa10.87□□□□□ -0.67
PRIM1-208ENST00000552590 U2AF1L5P0DN76 240 aaPredicted RBP10.87□□□□□ -0.67
PRIM1-208ENST00000552590 U2AF1Q01081 240 aaKnown RBP eCLIP10.87□□□□□ -0.67
PRIM1-208ENST00000552590 KMT5BQ4FZB7 885 aa10.87□□□□□ -0.67
PRIM1-208ENST00000552590 CCDC152Q4G0S7 254 aa10.87□□□□□ -0.67
PRIM1-208ENST00000552590 ZSCAN1Q8NBB4 408 aa10.87□□□□□ -0.67
PRIM1-208ENST00000552590 TDRD3Q9H7E2 651 aaKnown RBP10.87□□□□□ -0.67
PRIM1-208ENST00000552590 ATP13A2Q9NQ11 1180 aa10.87□□□□□ -0.67
PRIM1-208ENST00000552590 EPG5Q9HCE0 2579 aa10.86□□□□□ -0.67
PRIM1-208ENST00000552590 PKD1L2Q7Z442 2459 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms