RNA–Protein interactions for RNA: ENST00000552542.5

TPCN1-220, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-220ENST00000552542 NECTIN1Q15223 517 aa17.46■□□□□ 0.39
TPCN1-220ENST00000552542 SUPT20HL1Q3ZLR7 823 aa17.46■□□□□ 0.39
TPCN1-220ENST00000552542 DCAF15Q66K64 600 aa17.46■□□□□ 0.39
TPCN1-220ENST00000552542 CREB3L3Q68CJ9 461 aa17.46■□□□□ 0.39
TPCN1-220ENST00000552542 TMEM39BQ9GZU3 492 aa17.46■□□□□ 0.39
TPCN1-220ENST00000552542 CNNM2Q9H8M5 875 aa17.46■□□□□ 0.39
TPCN1-220ENST00000552542 SLC27A2O14975 620 aa17.45■□□□□ 0.38
TPCN1-220ENST00000552542 CYP21A2P08686 494 aa17.45■□□□□ 0.38
TPCN1-220ENST00000552542 TRDNQ13061 729 aa17.45■□□□□ 0.38
TPCN1-220ENST00000552542 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
TPCN1-220ENST00000552542 STAG1Q8WVM7 1258 aa17.45■□□□□ 0.38
TPCN1-220ENST00000552542 MYH1P12882 1939 aa17.45■□□□□ 0.38
TPCN1-220ENST00000552542 DDTLA6NHG4 134 aaPredicted RBP17.44■□□□□ 0.38
TPCN1-220ENST00000552542 SEC24BO95487 1268 aa17.44■□□□□ 0.38
TPCN1-220ENST00000552542 CHADLQ6NUI6 762 aa17.44■□□□□ 0.38
TPCN1-220ENST00000552542 C16orf86Q6ZW13 317 aa17.44■□□□□ 0.38
TPCN1-220ENST00000552542 C22orf23Q9BZE7 217 aa17.44■□□□□ 0.38
TPCN1-220ENST00000552542 BAZ2AQ9UIF9 1905 aaKnown RBP17.43■□□□□ 0.38
TPCN1-220ENST00000552542 TBC1D12O60347 775 aa17.43■□□□□ 0.38
TPCN1-220ENST00000552542 HAND2P61296 217 aa17.43■□□□□ 0.38
TPCN1-220ENST00000552542 AKNAD1Q5T1N1 836 aa17.43■□□□□ 0.38
TPCN1-220ENST00000552542 MFSD6Q6ZSS7 791 aa17.43■□□□□ 0.38
TPCN1-220ENST00000552542 RALYLQ86SE5 291 aaKnown RBP17.43■□□□□ 0.38
TPCN1-220ENST00000552542 ZFPM1Q8IX07 1006 aa17.43■□□□□ 0.38
TPCN1-220ENST00000552542 JMYQ8N9B5 988 aa17.43■□□□□ 0.38
TPCN1-220ENST00000552542 TEPSINQ96N21 525 aa17.43■□□□□ 0.38
TPCN1-220ENST00000552542 KRT23Q9C075 422 aa17.43■□□□□ 0.38
TPCN1-220ENST00000552542 ADM5C9JUS6 153 aa17.42■□□□□ 0.38
TPCN1-220ENST00000552542 HMGB1P09429 215 aaKnown RBP17.42■□□□□ 0.38
TPCN1-220ENST00000552542 CYP2D6P10635 497 aa17.42■□□□□ 0.38
TPCN1-220ENST00000552542 PSMA5P28066 241 aa17.42■□□□□ 0.38
TPCN1-220ENST00000552542 RBM25P49756 843 aaKnown RBP17.42■□□□□ 0.38
TPCN1-220ENST00000552542 PLCD1P51178 756 aa17.42■□□□□ 0.38
TPCN1-220ENST00000552542 SLC4A8Q2Y0W8 1093 aa17.42■□□□□ 0.38
TPCN1-220ENST00000552542 TSGA10IPQ3SY00 556 aa17.42■□□□□ 0.38
TPCN1-220ENST00000552542 SH3BP5LQ7L8J4 393 aa17.42■□□□□ 0.38
TPCN1-220ENST00000552542 METTL16Q86W50 562 aaKnown RBP17.42■□□□□ 0.38
TPCN1-220ENST00000552542 IL27Q8NEV9 243 aa17.42■□□□□ 0.38
TPCN1-220ENST00000552542 KCNB2Q92953 911 aa17.42■□□□□ 0.38
TPCN1-220ENST00000552542 MKNK2Q9HBH9 465 aa17.42■□□□□ 0.38
TPCN1-220ENST00000552542 CYP2D7A0A087X1C5 515 aa17.41■□□□□ 0.38
TPCN1-220ENST00000552542 ORC4O43929 436 aa17.41■□□□□ 0.38
TPCN1-220ENST00000552542 PPP1R12BO60237 982 aaPredicted RBP17.41■□□□□ 0.38
TPCN1-220ENST00000552542 POTEIP0CG38 1075 aa17.41■□□□□ 0.38
TPCN1-220ENST00000552542 POTEJP0CG39 1038 aa17.41■□□□□ 0.38
TPCN1-220ENST00000552542 GABPAQ06546 454 aa17.41■□□□□ 0.38
TPCN1-220ENST00000552542 MAP1SQ66K74 1059 aaPredicted RBP17.41■□□□□ 0.38
TPCN1-220ENST00000552542 TBC1D10CQ8IV04 446 aa17.41■□□□□ 0.38
TPCN1-220ENST00000552542 NCOA7Q8NI08 942 aa17.41■□□□□ 0.38
TPCN1-220ENST00000552542 ESR2Q92731 530 aa17.41■□□□□ 0.38
TPCN1-220ENST00000552542 CDCA5Q96FF9 252 aa17.41■□□□□ 0.38
TPCN1-220ENST00000552542 TBC1D32Q96NH3 1257 aa17.41■□□□□ 0.38
TPCN1-220ENST00000552542 GLIS2Q9BZE0 524 aaPredicted RBP17.41■□□□□ 0.38
TPCN1-220ENST00000552542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.41■□□□□ 0.38
TPCN1-220ENST00000552542 TOMM22Q9NS69 142 aa17.41■□□□□ 0.38
TPCN1-220ENST00000552542 E7EWF7 191 aa17.4■□□□□ 0.38
TPCN1-220ENST00000552542 CTDSPL2Q05D32 466 aa17.4■□□□□ 0.38
TPCN1-220ENST00000552542 USP48Q86UV5 1035 aa17.4■□□□□ 0.38
TPCN1-220ENST00000552542 CCDC17Q96LX7 622 aa17.4■□□□□ 0.38
TPCN1-220ENST00000552542 ZNF341Q9BYN7 854 aa17.4■□□□□ 0.38
TPCN1-220ENST00000552542 FGRP09769 529 aa17.39■□□□□ 0.37
TPCN1-220ENST00000552542 CDK8P49336 464 aa17.39■□□□□ 0.37
TPCN1-220ENST00000552542 MAP3K10Q02779 954 aa17.39■□□□□ 0.37
TPCN1-220ENST00000552542 PPP4R3BQ5MIZ7 849 aa17.39■□□□□ 0.37
TPCN1-220ENST00000552542 NBPF12Q5TAG4 269 aaPredicted RBP17.39■□□□□ 0.37
TPCN1-220ENST00000552542 IL17RAQ96F46 866 aa17.39■□□□□ 0.37
TPCN1-220ENST00000552542 GINM1Q9NU53 330 aa17.39■□□□□ 0.37
TPCN1-220ENST00000552542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.39■□□□□ 0.37
TPCN1-220ENST00000552542 SNX14Q9Y5W7 946 aa17.39■□□□□ 0.37
TPCN1-220ENST00000552542 SSC5DA1L4H1 1573 aa17.39■□□□□ 0.37
TPCN1-220ENST00000552542 PCNTO95613 3336 aa17.39■□□□□ 0.37
TPCN1-220ENST00000552542 SIPA1L1O43166 1804 aa17.38■□□□□ 0.37
TPCN1-220ENST00000552542 IREB2P48200 963 aaKnown RBP17.38■□□□□ 0.37
TPCN1-220ENST00000552542 FKBP1BP68106 108 aa17.38■□□□□ 0.37
TPCN1-220ENST00000552542 TATDN1Q6P1N9 297 aa17.38■□□□□ 0.37
TPCN1-220ENST00000552542 ZNF444Q8N0Y2 327 aaPredicted RBP17.38■□□□□ 0.37
TPCN1-220ENST00000552542 DYNLL2Q96FJ2 89 aa17.38■□□□□ 0.37
TPCN1-220ENST00000552542 TM6SF1Q9BZW5 370 aa17.38■□□□□ 0.37
TPCN1-220ENST00000552542 NBPF3Q9H094 633 aa17.38■□□□□ 0.37
TPCN1-220ENST00000552542 SCAF8Q9UPN6 1271 aaKnown RBP17.38■□□□□ 0.37
TPCN1-220ENST00000552542 NEDD4P46934 1319 aa17.38■□□□□ 0.37
TPCN1-220ENST00000552542 PLIN4Q96Q06 1357 aa17.38■□□□□ 0.37
TPCN1-220ENST00000552542 TSPY2A6NKD2 308 aa17.37■□□□□ 0.37
TPCN1-220ENST00000552542 SART3Q15020 963 aaKnown RBP17.37■□□□□ 0.37
TPCN1-220ENST00000552542 CCDC178Q5BJE1 867 aa17.37■□□□□ 0.37
TPCN1-220ENST00000552542 IQCA1Q86XH1 822 aa17.37■□□□□ 0.37
TPCN1-220ENST00000552542 CDAN1Q8IWY9 1227 aa17.37■□□□□ 0.37
TPCN1-220ENST00000552542 JAKMIP1Q96N16 626 aaKnown RBP17.37■□□□□ 0.37
TPCN1-220ENST00000552542 NEK1Q96PY6 1258 aa17.37■□□□□ 0.37
TPCN1-220ENST00000552542 DNAJC18Q9H819 358 aa17.37■□□□□ 0.37
TPCN1-220ENST00000552542 WDR19Q8NEZ3 1342 aa17.37■□□□□ 0.37
TPCN1-220ENST00000552542 PAPPA2Q9BXP8 1791 aa17.36■□□□□ 0.37
TPCN1-220ENST00000552542 RANBP6O60518 1105 aaKnown RBP17.36■□□□□ 0.37
TPCN1-220ENST00000552542 TSPY3P0CV98 308 aa17.36■□□□□ 0.37
TPCN1-220ENST00000552542 TSPY8P0CW00 308 aa17.36■□□□□ 0.37
TPCN1-220ENST00000552542 SHMT1P34896 483 aa17.36■□□□□ 0.37
TPCN1-220ENST00000552542 CERKLQ49MI3 558 aaPredicted RBP17.36■□□□□ 0.37
TPCN1-220ENST00000552542 RRP12Q5JTH9 1297 aaKnown RBP17.36■□□□□ 0.37
TPCN1-220ENST00000552542 BLOC1S2Q6QNY1 142 aa17.36■□□□□ 0.37
TPCN1-220ENST00000552542 ARMC9Q7Z3E5 817 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms