RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 RILPL2Q969X0 211 aa12.79□□□□□ -0.36
PTCH1-225ENST00000551845 CSADQ9Y600 493 aa12.79□□□□□ -0.36
PTCH1-225ENST00000551845 HLA-DOAP06340 250 aa12.78□□□□□ -0.36
PTCH1-225ENST00000551845 MAP3K10Q02779 954 aa12.78□□□□□ -0.36
PTCH1-225ENST00000551845 SLFNL1Q499Z3 407 aa12.78□□□□□ -0.36
PTCH1-225ENST00000551845 FBXO46Q6PJ61 603 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-225ENST00000551845 TTC6Q86TZ1 520 aa12.78□□□□□ -0.36
PTCH1-225ENST00000551845 DDRGK1Q96HY6 314 aa12.78□□□□□ -0.36
PTCH1-225ENST00000551845 WRNIP1Q96S55 665 aa12.78□□□□□ -0.36
PTCH1-225ENST00000551845 PUS7LQ9H0K6 701 aaKnown RBP12.78□□□□□ -0.36
PTCH1-225ENST00000551845 ARMT1Q9H993 441 aa12.78□□□□□ -0.36
PTCH1-225ENST00000551845 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTCH1-225ENST00000551845 PALD1Q9ULE6 856 aa12.78□□□□□ -0.36
PTCH1-225ENST00000551845 RPAP1Q9BWH6 1393 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-225ENST00000551845 MBD4O95243 580 aa12.77□□□□□ -0.37
PTCH1-225ENST00000551845 CHGBP05060 677 aa12.77□□□□□ -0.37
PTCH1-225ENST00000551845 POLR3DP05423 398 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-225ENST00000551845 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-225ENST00000551845 LCORLQ8N3X6 602 aa12.77□□□□□ -0.37
PTCH1-225ENST00000551845 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTCH1-225ENST00000551845 TRIM34Q9BYJ4 488 aa12.77□□□□□ -0.37
PTCH1-225ENST00000551845 ATP8A2Q9NTI2 1148 aa12.77□□□□□ -0.37
PTCH1-225ENST00000551845 ZNF112Q9UJU3 913 aa12.77□□□□□ -0.37
PTCH1-225ENST00000551845 FLT1P17948 1338 aa12.77□□□□□ -0.37
PTCH1-225ENST00000551845 GPR25O00155 361 aa12.76□□□□□ -0.37
PTCH1-225ENST00000551845 PDE4AP27815 886 aa12.76□□□□□ -0.37
PTCH1-225ENST00000551845 SPRYD7Q5W111 196 aa12.76□□□□□ -0.37
PTCH1-225ENST00000551845 CRACR2BQ8N4Y2 399 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-225ENST00000551845 ZKSCAN4Q969J2 545 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-225ENST00000551845 OSBP2Q969R2 916 aa12.76□□□□□ -0.37
PTCH1-225ENST00000551845 CLMNQ96JQ2 1002 aa12.76□□□□□ -0.37
PTCH1-225ENST00000551845 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
PTCH1-225ENST00000551845 ELP3Q9H9T3 547 aa12.76□□□□□ -0.37
PTCH1-225ENST00000551845 MCM9Q9NXL9 1143 aa12.76□□□□□ -0.37
PTCH1-225ENST00000551845 SAP30BPQ9UHR5 308 aaKnown RBP12.76□□□□□ -0.37
PTCH1-225ENST00000551845 HERC5Q9UII4 1024 aaKnown RBP12.76□□□□□ -0.37
PTCH1-225ENST00000551845 SLC4A4Q9Y6R1 1079 aa12.76□□□□□ -0.37
PTCH1-225ENST00000551845 PHF20L1A8MW92 1017 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 PRKAB2O43741 272 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 CTNND1O60716 968 aaKnown RBP12.75□□□□□ -0.37
PTCH1-225ENST00000551845 ZBTB48P10074 688 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-225ENST00000551845 GNAT2P19087 354 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 INPP5BP32019 993 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 INHBEP58166 350 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 VGLL4Q14135 290 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 RFX7Q2KHR2 1363 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 ZMYM1Q5SVZ6 1142 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 ATRNL1Q5VV63 1379 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 ERO1BQ86YB8 467 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 AMOTL1Q8IY63 956 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 SDR42E1Q8WUS8 393 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 PAPPA2Q9BXP8 1791 aa12.75□□□□□ -0.37
PTCH1-225ENST00000551845 DCP1AQ9NPI6 582 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-225ENST00000551845 PATL2C9JE40 543 aaKnown RBP12.74□□□□□ -0.37
PTCH1-225ENST00000551845 FKTNO75072 461 aa12.74□□□□□ -0.37
PTCH1-225ENST00000551845 APPP05067 770 aa12.74□□□□□ -0.37
PTCH1-225ENST00000551845 MKRN3Q13064 507 aaKnown RBP12.74□□□□□ -0.37
PTCH1-225ENST00000551845 OPTNQ96CV9 577 aa12.74□□□□□ -0.37
PTCH1-225ENST00000551845 WNK4Q96J92 1243 aa12.74□□□□□ -0.37
PTCH1-225ENST00000551845 PICK1Q9NRD5 415 aa12.74□□□□□ -0.37
PTCH1-225ENST00000551845 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
PTCH1-225ENST00000551845 PPP4R2Q9NY27 417 aa12.74□□□□□ -0.37
PTCH1-225ENST00000551845 SSC5DA1L4H1 1573 aa12.73□□□□□ -0.37
PTCH1-225ENST00000551845 MANSC4A6NHS7 340 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-225ENST00000551845 HIP1O00291 1037 aa12.73□□□□□ -0.37
PTCH1-225ENST00000551845 GPAA1O43292 621 aa12.73□□□□□ -0.37
PTCH1-225ENST00000551845 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
PTCH1-225ENST00000551845 SDSP20132 328 aa12.73□□□□□ -0.37
PTCH1-225ENST00000551845 TM4SF4P48230 202 aa12.73□□□□□ -0.37
PTCH1-225ENST00000551845 PPATQ06203 517 aa12.73□□□□□ -0.37
PTCH1-225ENST00000551845 MCMDC2Q4G0Z9 681 aa12.73□□□□□ -0.37
PTCH1-225ENST00000551845 NOL9Q5SY16 702 aaKnown RBP12.73□□□□□ -0.37
PTCH1-225ENST00000551845 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
PTCH1-225ENST00000551845 METTL16Q86W50 562 aaKnown RBP12.73□□□□□ -0.37
PTCH1-225ENST00000551845 SEC62Q99442 399 aaKnown RBP12.73□□□□□ -0.37
PTCH1-225ENST00000551845 NACAP1Q9BZK3 213 aa12.73□□□□□ -0.37
PTCH1-225ENST00000551845 SERPINB13Q9UIV8 391 aa12.73□□□□□ -0.37
PTCH1-225ENST00000551845 SPDYE5A6NIY4 337 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 FAM196BA6NMK8 535 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 USP17L12C9JPN9 530 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 USP17L21D6R901 530 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 M0R2C6 588 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 SLURP2P0DP57 97 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 PLCD1P51178 756 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 SREBF2Q12772 1141 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 SLC4A8Q2Y0W8 1093 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 SCYL3Q8IZE3 742 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 EHD4Q9H223 541 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 SNCAIPQ9Y6H5 919 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 MYH13Q9UKX3 1938 aa12.72□□□□□ -0.37
PTCH1-225ENST00000551845 MYH2Q9UKX2 1941 aa12.71□□□□□ -0.37
PTCH1-225ENST00000551845 GSG1L2A8MUP6 293 aa12.71□□□□□ -0.37
PTCH1-225ENST00000551845 CAP2P40123 477 aa12.71□□□□□ -0.37
PTCH1-225ENST00000551845 GTF2A2P52657 109 aa12.71□□□□□ -0.37
PTCH1-225ENST00000551845 NOM1Q5C9Z4 860 aaKnown RBP12.71□□□□□ -0.37
PTCH1-225ENST00000551845 C12orf60Q5U649 245 aa12.71□□□□□ -0.37
PTCH1-225ENST00000551845 OTUD7BQ6GQQ9 843 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms