RNA–Protein interactions for RNA: ENST00000551705.1

TMEM106C-217, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 666 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-217ENST00000551705 METTL24Q5JXM2 366 aa16.8■□□□□ 0.28
TMEM106C-217ENST00000551705 LRRFIP2Q9Y608 721 aaKnown RBP16.8■□□□□ 0.28
TMEM106C-217ENST00000551705 ZKSCAN1P17029 563 aaPredicted RBP16.79■□□□□ 0.28
TMEM106C-217ENST00000551705 CCL14Q16627 93 aa16.79■□□□□ 0.28
TMEM106C-217ENST00000551705 PROCA1Q8NCQ7 364 aaPredicted RBP16.79■□□□□ 0.28
TMEM106C-217ENST00000551705 KAZALD1Q96I82 304 aa16.79■□□□□ 0.28
TMEM106C-217ENST00000551705 SUCLG2Q96I99 432 aa16.79■□□□□ 0.28
TMEM106C-217ENST00000551705 SENP6Q9GZR1 1112 aaPredicted RBP16.79■□□□□ 0.28
TMEM106C-217ENST00000551705 ASCC2Q9H1I8 757 aaPredicted RBP16.79■□□□□ 0.28
TMEM106C-217ENST00000551705 MYO9BQ13459 2157 aa16.78■□□□□ 0.28
TMEM106C-217ENST00000551705 DDTLA6NHG4 134 aaPredicted RBP16.78■□□□□ 0.28
TMEM106C-217ENST00000551705 CTNND1O60716 968 aaKnown RBP16.78■□□□□ 0.28
TMEM106C-217ENST00000551705 SMAD3P84022 425 aaKnown RBP16.78■□□□□ 0.28
TMEM106C-217ENST00000551705 MORF4L1Q9UBU8 362 aa16.78■□□□□ 0.28
TMEM106C-217ENST00000551705 SIPA1L1O43166 1804 aa16.77■□□□□ 0.28
TMEM106C-217ENST00000551705 FAM196BA6NMK8 535 aa16.77■□□□□ 0.28
TMEM106C-217ENST00000551705 PDE8BO95263 885 aa16.77■□□□□ 0.28
TMEM106C-217ENST00000551705 HMGCS2P54868 508 aa16.77■□□□□ 0.28
TMEM106C-217ENST00000551705 MAP3K12Q12852 859 aa16.77■□□□□ 0.28
TMEM106C-217ENST00000551705 ZSCAN29Q8IWY8 852 aaPredicted RBP16.77■□□□□ 0.28
TMEM106C-217ENST00000551705 SOCS4Q8WXH5 440 aa16.77■□□□□ 0.28
TMEM106C-217ENST00000551705 NUDT12Q9BQG2 462 aa16.77■□□□□ 0.28
TMEM106C-217ENST00000551705 TCF20Q9UGU0 1960 aaKnown RBP16.77■□□□□ 0.27
TMEM106C-217ENST00000551705 XRCC5P13010 732 aaKnown RBP16.76■□□□□ 0.27
TMEM106C-217ENST00000551705 RTP1P59025 263 aa16.76■□□□□ 0.27
TMEM106C-217ENST00000551705 MAP3K10Q02779 954 aa16.76■□□□□ 0.27
TMEM106C-217ENST00000551705 SPP2Q13103 211 aa16.76■□□□□ 0.27
TMEM106C-217ENST00000551705 WDR66Q8TBY9 1149 aa16.76■□□□□ 0.27
TMEM106C-217ENST00000551705 DDX4Q9NQI0 724 aaKnown RBP16.76■□□□□ 0.27
TMEM106C-217ENST00000551705 C9orf78Q9NZ63 289 aaPredicted RBP16.76■□□□□ 0.27
TMEM106C-217ENST00000551705 PRKAG2Q9UGJ0 569 aa16.76■□□□□ 0.27
TMEM106C-217ENST00000551705 ENTPD3O75355 529 aa16.75■□□□□ 0.27
TMEM106C-217ENST00000551705 ZEB1P37275 1124 aaPredicted RBP16.75■□□□□ 0.27
TMEM106C-217ENST00000551705 KLHDC4Q8TBB5 520 aa16.75■□□□□ 0.27
TMEM106C-217ENST00000551705 IDI2Q9BXS1 227 aa16.75■□□□□ 0.27
TMEM106C-217ENST00000551705 TXNRD2Q9NNW7 524 aa16.75■□□□□ 0.27
TMEM106C-217ENST00000551705 KIF16BQ96L93 1317 aa16.74■□□□□ 0.27
TMEM106C-217ENST00000551705 CHD9Q3L8U1 2897 aa16.74■□□□□ 0.27
TMEM106C-217ENST00000551705 FGFR2P21802 821 aa16.74■□□□□ 0.27
TMEM106C-217ENST00000551705 GRIN2CQ14957 1233 aa16.74■□□□□ 0.27
TMEM106C-217ENST00000551705 USP6NLQ92738 828 aa16.74■□□□□ 0.27
TMEM106C-217ENST00000551705 BADQ92934 168 aa16.74■□□□□ 0.27
TMEM106C-217ENST00000551705 PRDM5Q9NQX1 630 aaPredicted RBP16.74■□□□□ 0.27
TMEM106C-217ENST00000551705 ATP11BQ9Y2G3 1177 aa16.74■□□□□ 0.27
TMEM106C-217ENST00000551705 PIEZO1Q92508 2521 aa16.74■□□□□ 0.27
TMEM106C-217ENST00000551705 PLXNA1Q9UIW2 1896 aa16.73■□□□□ 0.27
TMEM106C-217ENST00000551705 PICALMQ13492 652 aa16.73■□□□□ 0.27
TMEM106C-217ENST00000551705 PUM3Q15397 648 aaKnown RBP16.73■□□□□ 0.27
TMEM106C-217ENST00000551705 ZNF280CQ8ND82 737 aa16.73■□□□□ 0.27
TMEM106C-217ENST00000551705 ADAMTS19Q8TE59 1207 aa16.73■□□□□ 0.27
TMEM106C-217ENST00000551705 PORCNQ9H237 461 aa16.73■□□□□ 0.27
TMEM106C-217ENST00000551705 BICC1Q9H694 974 aaKnown RBP16.73■□□□□ 0.27
TMEM106C-217ENST00000551705 REV3LO60673 3130 aa16.73■□□□□ 0.27
TMEM106C-217ENST00000551705 LDHBP07195 334 aaKnown RBP16.72■□□□□ 0.27
TMEM106C-217ENST00000551705 IFIT1P09914 478 aaKnown RBP16.72■□□□□ 0.27
TMEM106C-217ENST00000551705 PABPC4Q13310 644 aaKnown RBP eCLIP16.72■□□□□ 0.27
TMEM106C-217ENST00000551705 PDE3AQ14432 1141 aa16.72■□□□□ 0.27
TMEM106C-217ENST00000551705 TRMT44Q8IYL2 757 aaKnown RBP16.72■□□□□ 0.27
TMEM106C-217ENST00000551705 APBA2Q99767 749 aa16.72■□□□□ 0.27
TMEM106C-217ENST00000551705 GAKO14976 1311 aa16.71■□□□□ 0.27
TMEM106C-217ENST00000551705 NBPF7P0C2Y1 421 aaPredicted RBP16.71■□□□□ 0.27
TMEM106C-217ENST00000551705 RGS2P41220 211 aa16.71■□□□□ 0.27
TMEM106C-217ENST00000551705 IRX3P78415 501 aaPredicted RBP16.71■□□□□ 0.27
TMEM106C-217ENST00000551705 RRP1BQ14684 758 aaKnown RBP16.71■□□□□ 0.27
TMEM106C-217ENST00000551705 MORN1Q5T089 497 aa16.71■□□□□ 0.27
TMEM106C-217ENST00000551705 ANKRD44Q8N8A2 993 aa16.71■□□□□ 0.27
TMEM106C-217ENST00000551705 GBF1Q92538 1859 aa16.71■□□□□ 0.27
TMEM106C-217ENST00000551705 CDK5RAP2Q96SN8 1893 aa16.71■□□□□ 0.27
TMEM106C-217ENST00000551705 GPR142Q7Z601 462 aa16.7■□□□□ 0.26
TMEM106C-217ENST00000551705 SH3RF1Q7Z6J0 888 aa16.7■□□□□ 0.26
TMEM106C-217ENST00000551705 PPM1EQ8WY54 764 aa16.7■□□□□ 0.26
TMEM106C-217ENST00000551705 P2RX7Q99572 595 aaKnown RBP16.7■□□□□ 0.26
TMEM106C-217ENST00000551705 PDLIM7Q9NR12 457 aa16.7■□□□□ 0.26
TMEM106C-217ENST00000551705 FLRT1Q9NZU1 646 aa16.7■□□□□ 0.26
TMEM106C-217ENST00000551705 DDX20Q9UHI6 824 aaKnown RBP16.7■□□□□ 0.26
TMEM106C-217ENST00000551705 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
TMEM106C-217ENST00000551705 DNM1LO00429 736 aa16.69■□□□□ 0.26
TMEM106C-217ENST00000551705 EPHB4P54760 987 aa16.69■□□□□ 0.26
TMEM106C-217ENST00000551705 HERVK_113P62684 666 aa16.69■□□□□ 0.26
TMEM106C-217ENST00000551705 RABL6Q3YEC7 729 aaPredicted RBP16.69■□□□□ 0.26
TMEM106C-217ENST00000551705 TRIM60Q495X7 471 aa16.69■□□□□ 0.26
TMEM106C-217ENST00000551705 SH3D19Q5HYK7 790 aa16.69■□□□□ 0.26
TMEM106C-217ENST00000551705 GPRC5AQ8NFJ5 357 aa16.69■□□□□ 0.26
TMEM106C-217ENST00000551705 RNPC3Q96LT9 517 aaKnown RBP16.69■□□□□ 0.26
TMEM106C-217ENST00000551705 UHRF1Q96T88 793 aaPredicted RBP16.69■□□□□ 0.26
TMEM106C-217ENST00000551705 SALL1Q9NSC2 1324 aa16.69■□□□□ 0.26
TMEM106C-217ENST00000551705 ALDH1L1O75891 902 aa16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 SLC5A1P13866 664 aa16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 DNAJB2P25686 324 aa16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 MAPK4P31152 587 aa16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 ERVK-9P63128 1117 aa16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 ERVK-24P63145 666 aa16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 MTMR2Q13614 643 aa16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 Q3C1V9 767 aa16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 POTEEQ6S8J3 1075 aa16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 LPAR1Q92633 364 aa16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 ASB2Q96Q27 587 aa16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 OSBPL5Q9H0X9 879 aaPredicted RBP16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMEM106C-217ENST00000551705 THEGQ9P2T0 379 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms