RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 FAM84BQ96KN1 310 aaPredicted RBP9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 ZC3H12CQ9C0D7 883 aaKnown RBP9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 NBPF3Q9H094 633 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 KCNQ5Q9NR82 932 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 PIM2Q9P1W9 311 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 ATP6V0A2Q9Y487 856 aa9.4□□□□□ -0.9
RAB3IP-215ENST00000551641 COL24A1Q17RW2 1714 aa9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 GOLGA8BA8MQT2 603 aa9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 ZNF213O14771 459 aa9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 CTIFO43310 598 aaKnown RBP9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 NEMFO60524 1076 aa9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 UBE3CQ15386 1083 aa9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 DRC7Q8IY82 874 aa9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 CACTINQ8WUQ7 758 aaKnown RBP9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 BPIFA3Q9BQP9 254 aa9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 RAI14Q9P0K7 980 aa9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 LRP2BPQ9P2M1 347 aa9.4□□□□□ -0.91
RAB3IP-215ENST00000551641 FGFR2P21802 821 aa9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 TTF1Q15361 905 aaPredicted RBP9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 DALRD3Q5D0E6 543 aaKnown RBP9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 ORC3Q9UBD5 711 aaPredicted RBP9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 NAP1L2Q9ULW6 460 aaPredicted RBP9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 ZMYM6O95789 1325 aa9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 ANKRD31Q8N7Z5 1873 aa9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 KCNA3P22001 575 aa9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 ARID4AP29374 1257 aaPredicted RBP9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 SLC4A8Q2Y0W8 1093 aa9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 RALYLQ86SE5 291 aaKnown RBP9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 SP8Q8IXZ3 490 aa9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 STK11IPQ8N1F8 1099 aa9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 SPATA5Q8NB90 893 aa9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 CLIC4Q9Y696 253 aa9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 RTL9Q8NET4 1388 aa9.39□□□□□ -0.91
RAB3IP-215ENST00000551641 KLRG2A4D1S0 409 aaPredicted RBP9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 RIOK3O14730 519 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 PPIP5K2O43314 1243 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 NDUFA8P51970 172 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 GTF2IP78347 998 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 KIF23Q02241 960 aaPredicted RBP9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 UBE4AQ14139 1066 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 LRRC8AQ8IWT6 810 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 CEP57L1Q8IYX8 460 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 PIH1D3Q9NQM4 214 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 KCND1Q9NSA2 647 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 ARAP2Q8WZ64 1704 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 TCRBV5S4A2TA0A5A2 114 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 KIF28PB7ZC32 967 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 SPTLC2O15270 562 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 PPFIA3O75145 1194 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 RASSF7Q02833 373 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 AXDND1Q5T1B0 1012 aaPredicted RBP9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 OTUD7BQ6GQQ9 843 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 STYK1Q6J9G0 422 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 ARHGAP27Q6ZUM4 889 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 MIGA1Q8NAN2 632 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 NAT10Q9H0A0 1025 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 GNL3LQ9NVN8 582 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 KIAA1468Q9P260 1216 aa9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 ANGEL1Q9UNK9 670 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-215ENST00000551641 SLX4Q8IY92 1834 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 BECN2A8MW95 431 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 SH2B2O14492 632 aaPredicted RBP9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 ATP2B4P23634 1241 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 STK38Q15208 465 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 ALX1Q15699 326 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 TBC1D10CQ8IV04 446 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 ANKRD7Q92527 254 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 SGIP1Q9BQI5 828 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 FAM237AA0A1B0GTK4 181 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 A0A1B0GVL5 298 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 CPLX1O14810 134 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 CMA1P23946 247 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 SYCP1Q15431 976 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 SLC9C2Q5TAH2 1124 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 ANO1Q5XXA6 986 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 LARGE2Q8N3Y3 721 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 TSC1Q92574 1164 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 CCDC94Q9BW85 323 aaPredicted RBP9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 NID2Q14112 1375 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 CASZ1Q86V15 1759 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 RAD17O75943 681 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 POLR3DP05423 398 aaPredicted RBP9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 UQCRFS1P1P0C7P4 283 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 TRDNQ13061 729 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 SLC39A14Q15043 492 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 CYB5R4Q7L1T6 521 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 ZNF804AQ7Z570 1209 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 SGMS1Q86VZ5 419 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 MAGEB6Q8N7X4 407 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 NKX2-3Q8TAU0 364 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 TMEM87BQ96K49 555 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 TIGD1Q96MW7 591 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 LEMD3Q9Y2U8 911 aa9.37□□□□□ -0.91
RAB3IP-215ENST00000551641 TIAM2Q8IVF5 1701 aa9.36□□□□□ -0.91
RAB3IP-215ENST00000551641 SMTNL1A8MU46 457 aa9.36□□□□□ -0.91
RAB3IP-215ENST00000551641 CDKL5O76039 1030 aa9.36□□□□□ -0.91
RAB3IP-215ENST00000551641 COL11A2P13942 1736 aaPredicted RBP9.36□□□□□ -0.91
RAB3IP-215ENST00000551641 PRDX5P30044 214 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms