RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 LDHCP07864 332 aa22.06■■□□□ 1.12
PRPF40B-215ENST00000551418 SPP2Q13103 211 aa22.06■■□□□ 1.12
PRPF40B-215ENST00000551418 ANKRD13CQ8N6S4 541 aa22.06■■□□□ 1.12
PRPF40B-215ENST00000551418 AGTPBP1Q9UPW5 1226 aa22.06■■□□□ 1.12
PRPF40B-215ENST00000551418 TRIOBPQ9H2D6 2365 aa22.06■■□□□ 1.12
PRPF40B-215ENST00000551418 SIPA1L1O43166 1804 aa22.06■■□□□ 1.12
PRPF40B-215ENST00000551418 GSTO1P78417 241 aa22.05■■□□□ 1.12
PRPF40B-215ENST00000551418 JAG1P78504 1218 aa22.05■■□□□ 1.12
PRPF40B-215ENST00000551418 TEX11Q8IYF3 940 aa22.05■■□□□ 1.12
PRPF40B-215ENST00000551418 SMCR8Q8TEV9 937 aaPredicted RBP22.05■■□□□ 1.12
PRPF40B-215ENST00000551418 DBNDD2Q9BQY9 259 aa22.05■■□□□ 1.12
PRPF40B-215ENST00000551418 LRP2BPQ9P2M1 347 aa22.05■■□□□ 1.12
PRPF40B-215ENST00000551418 CAP2P40123 477 aa22.04■■□□□ 1.12
PRPF40B-215ENST00000551418 POLA2Q14181 598 aa22.04■■□□□ 1.12
PRPF40B-215ENST00000551418 SHROOM1Q2M3G4 852 aaPredicted RBP22.04■■□□□ 1.12
PRPF40B-215ENST00000551418 ADGRA1Q86SQ6 560 aa22.04■■□□□ 1.12
PRPF40B-215ENST00000551418 U2AF1L4Q8WU68 220 aaKnown RBP22.04■■□□□ 1.12
PRPF40B-215ENST00000551418 DPF3Q92784 378 aa22.04■■□□□ 1.12
PRPF40B-215ENST00000551418 C1orf115Q9H7X2 142 aa22.04■■□□□ 1.12
PRPF40B-215ENST00000551418 CDK5RAP2Q96SN8 1893 aa22.03■■□□□ 1.12
PRPF40B-215ENST00000551418 TNPO2O14787 897 aaKnown RBP22.03■■□□□ 1.12
PRPF40B-215ENST00000551418 HMGCS2P54868 508 aa22.03■■□□□ 1.12
PRPF40B-215ENST00000551418 UBXN2AP68543 259 aa22.03■■□□□ 1.12
PRPF40B-215ENST00000551418 SLAIN1Q8ND83 568 aa22.03■■□□□ 1.12
PRPF40B-215ENST00000551418 AATFQ9NY61 560 aaKnown RBP eCLIP22.03■■□□□ 1.12
PRPF40B-215ENST00000551418 LOC285556D6RIA3 1793 aa22.02■■□□□ 1.12
PRPF40B-215ENST00000551418 INHAP05111 366 aa22.02■■□□□ 1.12
PRPF40B-215ENST00000551418 UQCRFS1P1P0C7P4 283 aa22.02■■□□□ 1.12
PRPF40B-215ENST00000551418 TNNI3KQ59H18 835 aa22.02■■□□□ 1.12
PRPF40B-215ENST00000551418 ZNF280CQ8ND82 737 aa22.02■■□□□ 1.12
PRPF40B-215ENST00000551418 NKX2-3Q8TAU0 364 aa22.02■■□□□ 1.12
PRPF40B-215ENST00000551418 FPGT-TNNI3KV9GXZ4 949 aa22.02■■□□□ 1.12
PRPF40B-215ENST00000551418 COL2A1P02458 1487 aaPredicted RBP22.02■■□□□ 1.12
PRPF40B-215ENST00000551418 PEX10O60683 326 aa22.01■■□□□ 1.11
PRPF40B-215ENST00000551418 CYP2E1P05181 493 aaPredicted RBP22.01■■□□□ 1.11
PRPF40B-215ENST00000551418 ATP8B2P98198 1209 aa22.01■■□□□ 1.11
PRPF40B-215ENST00000551418 CHRDL2Q6WN34 429 aa22.01■■□□□ 1.11
PRPF40B-215ENST00000551418 TAOK2Q9UL54 1235 aa22.01■■□□□ 1.11
PRPF40B-215ENST00000551418 SGPL1O95470 568 aa22■■□□□ 1.11
PRPF40B-215ENST00000551418 MAP4K4O95819 1239 aaPredicted RBP22■■□□□ 1.11
PRPF40B-215ENST00000551418 IRF5Q13568 498 aa22■■□□□ 1.11
PRPF40B-215ENST00000551418 TTC39AQ5SRH9 613 aa22■■□□□ 1.11
PRPF40B-215ENST00000551418 NAA16Q6N069 864 aaPredicted RBP22■■□□□ 1.11
PRPF40B-215ENST00000551418 MAPKAPK5Q8IW41 473 aa22■■□□□ 1.11
PRPF40B-215ENST00000551418 PROCA1Q8NCQ7 364 aaPredicted RBP22■■□□□ 1.11
PRPF40B-215ENST00000551418 SSH3Q8TE77 659 aa22■■□□□ 1.11
PRPF40B-215ENST00000551418 TGFBRAP1Q8WUH2 860 aa22■■□□□ 1.11
PRPF40B-215ENST00000551418 DNAJC18Q9H819 358 aa22■■□□□ 1.11
PRPF40B-215ENST00000551418 PIH1D3Q9NQM4 214 aaKnown RBP22■■□□□ 1.11
PRPF40B-215ENST00000551418 USP17L5A8MUK1 530 aa21.99■■□□□ 1.11
PRPF40B-215ENST00000551418 ZAP70P43403 619 aa21.99■■□□□ 1.11
PRPF40B-215ENST00000551418 ZKSCAN2Q63HK3 967 aa21.99■■□□□ 1.11
PRPF40B-215ENST00000551418 PXYLP1Q8TE99 480 aa21.99■■□□□ 1.11
PRPF40B-215ENST00000551418 DEFB118Q96PH6 123 aa21.99■■□□□ 1.11
PRPF40B-215ENST00000551418 ASCC2Q9H1I8 757 aaPredicted RBP21.99■■□□□ 1.11
PRPF40B-215ENST00000551418 GPR108Q9NPR9 543 aa21.99■■□□□ 1.11
PRPF40B-215ENST00000551418 TLR7Q9NYK1 1049 aaKnown RBP21.99■■□□□ 1.11
PRPF40B-215ENST00000551418 SURF6O75683 361 aaKnown RBP21.98■■□□□ 1.11
PRPF40B-215ENST00000551418 FARP2O94887 1054 aaPredicted RBP21.98■■□□□ 1.11
PRPF40B-215ENST00000551418 RLBP1P12271 317 aa21.98■■□□□ 1.11
PRPF40B-215ENST00000551418 DYNLL1P63167 89 aaKnown RBP21.98■■□□□ 1.11
PRPF40B-215ENST00000551418 FAM110CQ1W6H9 321 aa21.98■■□□□ 1.11
PRPF40B-215ENST00000551418 RBM27Q9P2N5 1060 aaKnown RBP21.98■■□□□ 1.11
PRPF40B-215ENST00000551418 PALD1Q9ULE6 856 aa21.98■■□□□ 1.11
PRPF40B-215ENST00000551418 PPP4CP60510 307 aa21.97■■□□□ 1.11
PRPF40B-215ENST00000551418 TRIM32Q13049 653 aa21.97■■□□□ 1.11
PRPF40B-215ENST00000551418 OS9Q13438 667 aaPredicted RBP21.97■■□□□ 1.11
PRPF40B-215ENST00000551418 SH3D19Q5HYK7 790 aa21.97■■□□□ 1.11
PRPF40B-215ENST00000551418 COA7Q96BR5 231 aa21.97■■□□□ 1.11
PRPF40B-215ENST00000551418 CCDC8Q9H0W5 538 aaPredicted RBP21.97■■□□□ 1.11
PRPF40B-215ENST00000551418 PI4KBQ9UBF8 816 aa21.97■■□□□ 1.11
PRPF40B-215ENST00000551418 SAP30BPQ9UHR5 308 aaKnown RBP21.97■■□□□ 1.11
PRPF40B-215ENST00000551418 HERC5Q9UII4 1024 aaKnown RBP21.97■■□□□ 1.11
PRPF40B-215ENST00000551418 GJD2Q9UKL4 321 aa21.97■■□□□ 1.11
PRPF40B-215ENST00000551418 MAST2Q6P0Q8 1798 aa21.97■■□□□ 1.11
PRPF40B-215ENST00000551418 PLXNB2O15031 1838 aa21.96■■□□□ 1.11
PRPF40B-215ENST00000551418 FOCADQ5VW36 1801 aa21.96■■□□□ 1.11
PRPF40B-215ENST00000551418 TFRCP02786 760 aaKnown RBP21.96■■□□□ 1.11
PRPF40B-215ENST00000551418 MTMR2Q13614 643 aa21.96■■□□□ 1.11
PRPF40B-215ENST00000551418 CCDC158Q5M9N0 1113 aa21.96■■□□□ 1.11
PRPF40B-215ENST00000551418 DBNLQ9UJU6 430 aaKnown RBP21.96■■□□□ 1.11
PRPF40B-215ENST00000551418 PNMA3Q9UL41 463 aa21.96■■□□□ 1.11
PRPF40B-215ENST00000551418 NDUFB9Q9Y6M9 179 aa21.96■■□□□ 1.11
PRPF40B-215ENST00000551418 FLT1P17948 1338 aa21.96■■□□□ 1.11
PRPF40B-215ENST00000551418 GDF11O95390 407 aa21.95■■□□□ 1.1
PRPF40B-215ENST00000551418 BAG3O95817 575 aa21.95■■□□□ 1.1
PRPF40B-215ENST00000551418 EAF2Q96CJ1 260 aaPredicted RBP21.95■■□□□ 1.1
PRPF40B-215ENST00000551418 P2RX7Q99572 595 aaKnown RBP21.95■■□□□ 1.1
PRPF40B-215ENST00000551418 NOL10Q9BSC4 688 aaKnown RBP21.95■■□□□ 1.1
PRPF40B-215ENST00000551418 PAK6Q9NQU5 681 aaPredicted RBP21.95■■□□□ 1.1
PRPF40B-215ENST00000551418 ZBTB7BO15156 539 aaPredicted RBP21.94■■□□□ 1.1
PRPF40B-215ENST00000551418 GCLCP48506 637 aaPredicted RBP21.94■■□□□ 1.1
PRPF40B-215ENST00000551418 HTATIP2Q9BUP3 242 aa21.94■■□□□ 1.1
PRPF40B-215ENST00000551418 WDR18Q9BV38 432 aa21.94■■□□□ 1.1
PRPF40B-215ENST00000551418 DHX36Q9H2U1 1008 aaKnown RBP21.94■■□□□ 1.1
PRPF40B-215ENST00000551418 TXNRD2Q9NNW7 524 aa21.94■■□□□ 1.1
PRPF40B-215ENST00000551418 NOP58Q9Y2X3 529 aaKnown RBP21.94■■□□□ 1.1
PRPF40B-215ENST00000551418 ALPK3Q96L96 1907 aa21.94■■□□□ 1.1
PRPF40B-215ENST00000551418 BACE1P56817 501 aa21.93■■□□□ 1.1
PRPF40B-215ENST00000551418 POTEEQ6S8J3 1075 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms