RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 DIAPH3Q9NSV4 1193 aa8.88□□□□□ -0.99
SMARCD1-210ENST00000551352 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.88□□□□□ -0.99
SMARCD1-210ENST00000551352 AKAP2Q9Y2D5 859 aa8.88□□□□□ -0.99
SMARCD1-210ENST00000551352 FRMPD3Q5JV73 1810 aa8.88□□□□□ -0.99
SMARCD1-210ENST00000551352 TRIOBPQ9H2D6 2365 aa8.88□□□□□ -0.99
SMARCD1-210ENST00000551352 GAKO14976 1311 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 SALL1Q9NSC2 1324 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 SZT2Q5T011 3432 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 HIP1O00291 1037 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 TLR2O60603 784 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 ECM2O94769 699 aaPredicted RBP8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 IFIT1P09914 478 aaKnown RBP8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 SLC5A1P13866 664 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 MCCP23508 829 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 TIMM10P62072 90 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 TCP10Q12799 353 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 ATP2B3Q16720 1220 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 GPAT2Q6NUI2 795 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 C17orf99Q6UX52 265 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 VPS37DQ86XT2 251 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 ERO1BQ86YB8 467 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 HSCBQ8IWL3 235 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 SH3TC2Q8TF17 1288 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 FAM151AQ8WW52 585 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 RUFY2Q8WXA3 655 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 LPIN2Q92539 896 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 SHISA4Q96DD7 197 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 NEUROD6Q96NK8 337 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 HAUS7Q99871 368 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 ANO2Q9NQ90 1003 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 DDX4Q9NQI0 724 aaKnown RBP8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 KCNH4Q9UQ05 1017 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 SUGT1Q9Y2Z0 365 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 CSADQ9Y600 493 aa8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 DDX60LQ5H9U9 1706 aaKnown RBP8.87□□□□□ -0.99
SMARCD1-210ENST00000551352 RANBP2P49792 3224 aaKnown RBP8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 RAD50Q92878 1312 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 MYH7P12883 1935 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 PHF20L1A8MW92 1017 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 ZBTB22O15209 634 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 FRAT2O75474 233 aaPredicted RBP8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 ANAPC15P60006 121 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 LACTBP83111 547 aaPredicted RBP8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 RASGRF1Q13972 1273 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 MTFR1Q15390 333 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 NOL9Q5SY16 702 aaKnown RBP8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 OTUD7BQ6GQQ9 843 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 CWC27Q6UX04 472 aaKnown RBP8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 PI16Q6UXB8 463 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 CCDC84Q86UT8 332 aaPredicted RBP8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 WDR66Q8TBY9 1149 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 IL17RAQ96F46 866 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 TRIM47Q96LD4 638 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 FSD1Q9BTV5 496 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 ZNF341Q9BYN7 854 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 LSG1Q9H089 658 aaKnown RBP8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 ZFYVE28Q9HCC9 887 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 CPA4Q9UI42 421 aa8.86□□□□□ -0.99
SMARCD1-210ENST00000551352 MAST3O60307 1309 aa8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 DDTLA6NHG4 134 aaPredicted RBP8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 WDHD1O75717 1129 aaPredicted RBP8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 MYCP01106 439 aaPredicted RBP8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 BCRP11274 1271 aa8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 CETPP11597 493 aa8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 PPATQ06203 517 aa8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 NMIQ13287 307 aaPredicted RBP8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 CCDC102BQ68D86 513 aa8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 EDC3Q96F86 508 aaKnown RBP8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 XAGE2Q96GT9 111 aa8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 DNAJC2Q99543 621 aaKnown RBP8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 ZCCHC17Q9NP64 241 aaKnown RBP8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 SNRKQ9NRH2 765 aa8.85□□□□□ -0.99
SMARCD1-210ENST00000551352 A0A0D9SFI3 127 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 PDHXO00330 501 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 CD2BP2O95400 341 aaKnown RBP8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 LDHBP07195 334 aaKnown RBP8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 OSBPP22059 807 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 HSPA4P34932 840 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 RHBDL3P58872 404 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 MAP3K10Q02779 954 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 SNAPC2Q13487 334 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 RRP1BQ14684 758 aaKnown RBP8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 HABP4Q5JVS0 413 aaKnown RBP8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 GORABQ5T7V8 394 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 KIAA1211Q6ZU35 1233 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 ANKRD23Q86SG2 305 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 TICAM2Q86XR7 235 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 KBTBD3Q8NAB2 608 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 FAM227BQ96M60 508 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 ANP32EQ9BTT0 268 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 USP40Q9NVE5 1235 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 PAG1Q9NWQ8 432 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 TMOD2Q9NZR1 351 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 PALD1Q9ULE6 856 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 NDUFB9Q9Y6M9 179 aa8.84□□□□□ -0.99
SMARCD1-210ENST00000551352 CCDC171Q6TFL3 1326 aa8.83□□□□□ -1
SMARCD1-210ENST00000551352 NAV1Q8NEY1 1877 aa8.83□□□□□ -1
SMARCD1-210ENST00000551352 PARP14Q460N5 1801 aa8.83□□□□□ -1
SMARCD1-210ENST00000551352 FAM196BA6NMK8 535 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms