RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 EIF5P55010 431 aaKnown RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 GNAI1P63096 354 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 IRX1P78414 480 aaPredicted RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 DHX8Q14562 1220 aaKnown RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 LRCH2Q5VUJ6 765 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 GPR161Q8N6U8 529 aaKnown RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 GPATCH11Q8N954 259 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 CHMP7Q8WUX9 453 aaPredicted RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 MIEF2Q96C03 454 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 TTC14Q96N46 770 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 TEX13AQ9BXU3 409 aaPredicted RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 FAM107BQ9H098 131 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 CRISPLD1Q9H336 500 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 CLSTN2Q9H4D0 955 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 QTRT2Q9H974 415 aaKnown RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 IMPACTQ9P2X3 320 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 CFDP1Q9UEE9 299 aaPredicted RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 MCM8Q9UJA3 840 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 RAB21Q9UL25 225 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 MTMR6Q9Y217 621 aa6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 RRP7AQ9Y3A4 280 aaKnown RBP6.15□□□□□ -1.42
LSM3P2-201ENST00000551246 TTC21AQ8NDW8 1320 aa6.15□□□□□ -1.43
LSM3P2-201ENST00000551246 ATXN2Q99700 1313 aaKnown RBP6.15□□□□□ -1.43
LSM3P2-201ENST00000551246 KIAA0232Q92628 1395 aa6.15□□□□□ -1.43
LSM3P2-201ENST00000551246 PTPRTO14522 1441 aa6.15□□□□□ -1.43
LSM3P2-201ENST00000551246 ASXL2Q76L83 1435 aa6.15□□□□□ -1.43
LSM3P2-201ENST00000551246 PRG4Q92954 1404 aaPredicted RBP6.15□□□□□ -1.43
LSM3P2-201ENST00000551246 INO80Q9ULG1 1556 aaPredicted RBP6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 KNDC1Q76NI1 1749 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 CCDC69A6NI79 296 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 F11P03951 625 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 SKILP12757 684 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 CASTP20810 708 aaKnown RBP6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 ITGA6P23229 1130 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 FNTAP49354 379 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 NEK4P51957 841 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 MRPL12P52815 198 aaKnown RBP6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 ETF1P62495 437 aaKnown RBP6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 APOBRQ0VD83 1088 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 UBAP2LQ14157 1087 aaKnown RBP6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 BRD3Q15059 726 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 MAP3K11Q16584 847 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 LRRFIP1Q32MZ4 808 aaKnown RBP6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 PREPLQ4J6C6 727 aaPredicted RBP6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 ZC3H12AQ5D1E8 599 aaKnown RBP6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 WLSQ5T9L3 541 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 NBPF6Q5VWK0 638 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 JAKMIP3Q5VZ66 844 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 ISM2Q6H9L7 571 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 LUZP1Q86V48 1076 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 ALDH16A1Q8IZ83 802 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 ANKRD44Q8N8A2 993 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 RABGGTAQ92696 567 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 COL26A1Q96A83 441 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 PPP1R13BQ96KQ4 1090 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 NBPF4Q96M43 638 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 PUS7Q96PZ0 661 aaKnown RBP6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 PLCD4Q9BRC7 762 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 TRAIPQ9BWF2 469 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 PHACTR1Q9C0D0 580 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 GPAMQ9HCL2 828 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 GNL3LQ9NVN8 582 aaKnown RBP6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 STK26Q9P289 416 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 NXF1Q9UBU9 619 aaKnown RBP6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 DNAI1Q9UI46 699 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 PALD1Q9ULE6 856 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 ZNF232Q9UNY5 417 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 TRAK1Q9UPV9 953 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 FANCD2Q9BXW9 1451 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 NRXN1Q9ULB1 1477 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 ABCC3O15438 1527 aa6.14□□□□□ -1.43
LSM3P2-201ENST00000551246 MYO5CQ9NQX4 1742 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 CCDC151A5D8V7 595 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 TMCO5BA8MYB1 307 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 H3BM21 787 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 U2SURPO15042 1029 aaKnown RBP6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 STX6O43752 255 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 SHOX2O60902 331 aaPredicted RBP6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 SEC31AO94979 1220 aaKnown RBP6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 SYT1P21579 422 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 GPTP24298 496 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 CALRP27797 417 aaKnown RBP6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 TMPOP42166 694 aaKnown RBP6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 GSDMDP57764 484 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 BEND6Q5SZJ8 279 aaPredicted RBP6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 VPS53Q5VIR6 699 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 C1orf53Q5VUE5 145 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 NBPF5PQ86XG9 351 aaPredicted RBP6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 ERC1Q8IUD2 1116 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 NPAS3Q8IXF0 933 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 PRPF38AQ8NAV1 312 aaKnown RBP6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 UBXN4Q92575 508 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 KCNB2Q92953 911 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 MYO19Q96H55 970 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 ZIC5Q96T25 663 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 GAS2L1Q99501 681 aaPredicted RBP6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 MKNK1Q9BUB5 465 aa6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 DDX19AQ9NUU7 478 aaKnown RBP6.13□□□□□ -1.43
LSM3P2-201ENST00000551246 CLIP2Q9UDT6 1046 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms