RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 B3GALT4O96024 378 aa7.61□□□□□ -1.19
SCAF11-214ENST00000550893 FSTP19883 344 aa7.61□□□□□ -1.19
SCAF11-214ENST00000550893 PTPN12Q05209 780 aaKnown RBP7.61□□□□□ -1.19
SCAF11-214ENST00000550893 EXOSC6Q5RKV6 272 aaKnown RBP7.61□□□□□ -1.19
SCAF11-214ENST00000550893 NUTM2GQ5VZR2 741 aa7.61□□□□□ -1.19
SCAF11-214ENST00000550893 ZSCAN29Q8IWY8 852 aaPredicted RBP7.61□□□□□ -1.19
SCAF11-214ENST00000550893 NLRP2Q9NX02 1062 aa7.61□□□□□ -1.19
SCAF11-214ENST00000550893 STOML1Q9UBI4 398 aa7.61□□□□□ -1.19
SCAF11-214ENST00000550893 SLIT1O75093 1534 aa7.61□□□□□ -1.19
SCAF11-214ENST00000550893 MED14O60244 1454 aa7.61□□□□□ -1.19
SCAF11-214ENST00000550893 NOS1P29475 1434 aa7.61□□□□□ -1.19
SCAF11-214ENST00000550893 TMEM131LA2VDJ0 1609 aa7.6□□□□□ -1.19
SCAF11-214ENST00000550893 PATL2C9JE40 543 aaKnown RBP7.6□□□□□ -1.19
SCAF11-214ENST00000550893 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-214ENST00000550893 CTSBP07858 339 aa7.6□□□□□ -1.19
SCAF11-214ENST00000550893 BMP3P12645 472 aa7.6□□□□□ -1.19
SCAF11-214ENST00000550893 MAOBP27338 520 aa7.6□□□□□ -1.19
SCAF11-214ENST00000550893 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-214ENST00000550893 FAM20CQ8IXL6 584 aa7.6□□□□□ -1.19
SCAF11-214ENST00000550893 C12orf50Q8NA57 414 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-214ENST00000550893 SMG8Q8ND04 991 aaKnown RBP7.6□□□□□ -1.19
SCAF11-214ENST00000550893 ASB16Q96NS5 453 aa7.6□□□□□ -1.19
SCAF11-214ENST00000550893 TRIM56Q9BRZ2 755 aaKnown RBP7.6□□□□□ -1.19
SCAF11-214ENST00000550893 SPHKAPQ2M3C7 1700 aa7.6□□□□□ -1.19
SCAF11-214ENST00000550893 NLRP1Q9C000 1473 aa7.6□□□□□ -1.19
SCAF11-214ENST00000550893 TNRQ92752 1358 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 ADGRB3O60242 1522 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 KIF3BO15066 747 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 CYP11A1P05108 521 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 MAPK8P45983 427 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 FCGRTP55899 365 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 FMR1Q06787 632 aaKnown RBP eCLIP7.59□□□□□ -1.19
SCAF11-214ENST00000550893 POU4F3Q15319 338 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.59□□□□□ -1.19
SCAF11-214ENST00000550893 AEBP1Q8IUX7 1158 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 BCO2Q9BYV7 579 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 SUGCTQ9HAC7 445 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 CYP4F12Q9HCS2 524 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 NRXN3Q9Y4C0 1643 aa7.59□□□□□ -1.19
SCAF11-214ENST00000550893 SETD1AO15047 1707 aaKnown RBP7.58□□□□□ -1.2
SCAF11-214ENST00000550893 HMX2A2RU54 273 aa7.58□□□□□ -1.2
SCAF11-214ENST00000550893 TIAF1O95411 115 aa7.58□□□□□ -1.2
SCAF11-214ENST00000550893 ECEL1O95672 775 aa7.58□□□□□ -1.2
SCAF11-214ENST00000550893 PDIA4P13667 645 aaKnown RBP7.58□□□□□ -1.2
SCAF11-214ENST00000550893 DRD2P14416 443 aa7.58□□□□□ -1.2
SCAF11-214ENST00000550893 ZNF157P51786 506 aaPredicted RBP7.58□□□□□ -1.2
SCAF11-214ENST00000550893 FAAP100Q0VG06 881 aa7.58□□□□□ -1.2
SCAF11-214ENST00000550893 RPS26P11Q5JNZ5 115 aaPredicted RBP7.58□□□□□ -1.2
SCAF11-214ENST00000550893 GGT6Q6P531 493 aa7.58□□□□□ -1.2
SCAF11-214ENST00000550893 DTHD1Q6ZMT9 781 aa7.58□□□□□ -1.2
SCAF11-214ENST00000550893 TRIM42Q8IWZ5 723 aa7.58□□□□□ -1.2
SCAF11-214ENST00000550893 DDX54Q8TDD1 881 aaKnown RBP7.58□□□□□ -1.2
SCAF11-214ENST00000550893 SETDB2Q96T68 719 aa7.58□□□□□ -1.2
SCAF11-214ENST00000550893 KCNF1Q9H3M0 494 aa7.58□□□□□ -1.2
SCAF11-214ENST00000550893 C7orf69Q9H7B7 122 aa7.58□□□□□ -1.2
SCAF11-214ENST00000550893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.58□□□□□ -1.2
SCAF11-214ENST00000550893 SCO2A0A1W2PP80 73 aa7.57□□□□□ -1.2
SCAF11-214ENST00000550893 GAS2O43903 313 aaKnown RBP7.57□□□□□ -1.2
SCAF11-214ENST00000550893 IGLV1-40P01703 118 aa7.57□□□□□ -1.2
SCAF11-214ENST00000550893 NXPE4Q6UWF7 544 aa7.57□□□□□ -1.2
SCAF11-214ENST00000550893 SLC51AQ86UW1 340 aa7.57□□□□□ -1.2
SCAF11-214ENST00000550893 PPP4R2Q9NY27 417 aa7.57□□□□□ -1.2
SCAF11-214ENST00000550893 NWD1Q149M9 1564 aa7.57□□□□□ -1.2
SCAF11-214ENST00000550893 ROCK1Q13464 1354 aa7.57□□□□□ -1.2
SCAF11-214ENST00000550893 CLTCL1P53675 1640 aa7.56□□□□□ -1.2
SCAF11-214ENST00000550893 ANKRD50Q9ULJ7 1429 aa7.56□□□□□ -1.2
SCAF11-214ENST00000550893 SGO2Q562F6 1265 aa7.56□□□□□ -1.2
SCAF11-214ENST00000550893 BEND4Q6ZU67 534 aa7.56□□□□□ -1.2
SCAF11-214ENST00000550893 KRTAP1-3Q8IUG1 177 aa7.56□□□□□ -1.2
SCAF11-214ENST00000550893 CLEC10AQ8IUN9 316 aa7.56□□□□□ -1.2
SCAF11-214ENST00000550893 FAM83CQ9BQN1 747 aa7.56□□□□□ -1.2
SCAF11-214ENST00000550893 CORO1BQ9BR76 489 aa7.56□□□□□ -1.2
SCAF11-214ENST00000550893 WWC3Q9ULE0 1092 aa7.56□□□□□ -1.2
SCAF11-214ENST00000550893 RNF112Q9ULX5 631 aa7.56□□□□□ -1.2
SCAF11-214ENST00000550893 HIF3AQ9Y2N7 669 aa7.56□□□□□ -1.2
SCAF11-214ENST00000550893 ZFYVE9O95405 1425 aa7.55□□□□□ -1.2
SCAF11-214ENST00000550893 NAIPQ13075 1403 aa7.55□□□□□ -1.2
SCAF11-214ENST00000550893 GSC2O15499 205 aa7.55□□□□□ -1.2
SCAF11-214ENST00000550893 SOX4Q06945 474 aaPredicted RBP7.55□□□□□ -1.2
SCAF11-214ENST00000550893 IFT172Q9UG01 1749 aa7.55□□□□□ -1.2
SCAF11-214ENST00000550893 IQSEC2Q5JU85 1478 aa7.55□□□□□ -1.2
SCAF11-214ENST00000550893 RPRD2Q5VT52 1461 aaKnown RBP7.55□□□□□ -1.2
SCAF11-214ENST00000550893 MAP4P27816 1152 aaKnown RBP7.54□□□□□ -1.2
SCAF11-214ENST00000550893 NFIAQ12857 509 aa7.54□□□□□ -1.2
SCAF11-214ENST00000550893 AP3B2Q13367 1082 aa7.54□□□□□ -1.2
SCAF11-214ENST00000550893 ARTNQ5T4W7 220 aa7.54□□□□□ -1.2
SCAF11-214ENST00000550893 RNF43Q68DV7 783 aa7.54□□□□□ -1.2
SCAF11-214ENST00000550893 C2CD4AQ8NCU7 369 aaPredicted RBP7.54□□□□□ -1.2
SCAF11-214ENST00000550893 FBF1Q8TES7 1133 aa7.54□□□□□ -1.2
SCAF11-214ENST00000550893 ZFYVE1Q9HBF4 777 aa7.54□□□□□ -1.2
SCAF11-214ENST00000550893 RRP7BPQ9NSQ0 103 aa7.54□□□□□ -1.2
SCAF11-214ENST00000550893 ANKRD30AQ9BXX3 1397 aa7.54□□□□□ -1.2
SCAF11-214ENST00000550893 CHD2O14647 1828 aaKnown RBP7.54□□□□□ -1.2
SCAF11-214ENST00000550893 P4HBP07237 508 aaKnown RBP7.53□□□□□ -1.2
SCAF11-214ENST00000550893 ADH5P11766 374 aa7.53□□□□□ -1.2
SCAF11-214ENST00000550893 XRCC5P13010 732 aaKnown RBP7.53□□□□□ -1.2
SCAF11-214ENST00000550893 RXRBP28702 533 aa7.53□□□□□ -1.2
SCAF11-214ENST00000550893 AKAP4Q5JQC9 854 aa7.53□□□□□ -1.2
SCAF11-214ENST00000550893 HP1BP3Q5SSJ5 553 aaPredicted RBP7.53□□□□□ -1.2
SCAF11-214ENST00000550893 ALG1LQ6GMV1 187 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms