RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 DNAJC18Q9H819 358 aa16.13■□□□□ 0.17
ERBB3-215ENST00000550828 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
ERBB3-215ENST00000550828 DOCK1Q14185 1865 aa16.13■□□□□ 0.17
ERBB3-215ENST00000550828 ROBO3Q96MS0 1386 aa16.13■□□□□ 0.17
ERBB3-215ENST00000550828 PCNTO95613 3336 aa16.12■□□□□ 0.17
ERBB3-215ENST00000550828 PHIPQ8WWQ0 1821 aa16.12■□□□□ 0.17
ERBB3-215ENST00000550828 FAM196BA6NMK8 535 aa16.12■□□□□ 0.17
ERBB3-215ENST00000550828 ITGBL1O95965 494 aaPredicted RBP16.12■□□□□ 0.17
ERBB3-215ENST00000550828 NKX2-3Q8TAU0 364 aa16.12■□□□□ 0.17
ERBB3-215ENST00000550828 CDCA5Q96FF9 252 aa16.12■□□□□ 0.17
ERBB3-215ENST00000550828 NAPBQ9H115 298 aa16.12■□□□□ 0.17
ERBB3-215ENST00000550828 TNNI2P48788 182 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 HAND2P61296 217 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 GABPAQ06546 454 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 TBC1D10CQ8IV04 446 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 ZSCAN29Q8IWY8 852 aaPredicted RBP16.11■□□□□ 0.17
ERBB3-215ENST00000550828 SLC44A5Q8NCS7 719 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 DYNLL2Q96FJ2 89 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 USP26Q9BXU7 913 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 BACH2Q9BYV9 841 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 FZD1Q9UP38 647 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 PPP2R3BQ9Y5P8 575 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 PASKQ96RG2 1323 aa16.11■□□□□ 0.17
ERBB3-215ENST00000550828 MINDY4BA8MYZ0 360 aa16.1■□□□□ 0.17
ERBB3-215ENST00000550828 CTDSPL2Q05D32 466 aa16.1■□□□□ 0.17
ERBB3-215ENST00000550828 COL9A3Q14050 684 aaPredicted RBP16.1■□□□□ 0.17
ERBB3-215ENST00000550828 RRP1BQ14684 758 aaKnown RBP16.1■□□□□ 0.17
ERBB3-215ENST00000550828 NECTIN1Q15223 517 aa16.1■□□□□ 0.17
ERBB3-215ENST00000550828 KIAA1211Q6ZU35 1233 aa16.1■□□□□ 0.17
ERBB3-215ENST00000550828 METTL16Q86W50 562 aaKnown RBP16.1■□□□□ 0.17
ERBB3-215ENST00000550828 CSRNP1Q96S65 589 aa16.1■□□□□ 0.17
ERBB3-215ENST00000550828 NACAP1Q9BZK3 213 aa16.1■□□□□ 0.17
ERBB3-215ENST00000550828 INCENPQ9NQS7 918 aa16.1■□□□□ 0.17
ERBB3-215ENST00000550828 ARPP21Q9UBL0 812 aaPredicted RBP16.1■□□□□ 0.17
ERBB3-215ENST00000550828 ANAPC4Q9UJX5 808 aa16.1■□□□□ 0.17
ERBB3-215ENST00000550828 U3KPZ7 1027 aaPredicted RBP16.1■□□□□ 0.17
ERBB3-215ENST00000550828 SLC27A2O14975 620 aa16.09■□□□□ 0.17
ERBB3-215ENST00000550828 REC8O95072 547 aa16.09■□□□□ 0.17
ERBB3-215ENST00000550828 POLR3DP05423 398 aaPredicted RBP16.09■□□□□ 0.17
ERBB3-215ENST00000550828 CYP21A2P08686 494 aa16.09■□□□□ 0.17
ERBB3-215ENST00000550828 MAP3K10Q02779 954 aa16.09■□□□□ 0.17
ERBB3-215ENST00000550828 PPARAQ07869 468 aa16.09■□□□□ 0.17
ERBB3-215ENST00000550828 SHROOM1Q2M3G4 852 aaPredicted RBP16.09■□□□□ 0.17
ERBB3-215ENST00000550828 STK11IPQ8N1F8 1099 aa16.09■□□□□ 0.17
ERBB3-215ENST00000550828 DHX36Q9H2U1 1008 aaKnown RBP16.09■□□□□ 0.17
ERBB3-215ENST00000550828 MYH4Q9Y623 1939 aa16.08■□□□□ 0.16
ERBB3-215ENST00000550828 TMEM88BA6NKF7 163 aa16.08■□□□□ 0.16
ERBB3-215ENST00000550828 SHMT1P34896 483 aa16.08■□□□□ 0.16
ERBB3-215ENST00000550828 CREB3L3Q68CJ9 461 aa16.08■□□□□ 0.16
ERBB3-215ENST00000550828 STOX1Q6ZVD7 989 aa16.08■□□□□ 0.16
ERBB3-215ENST00000550828 MIGA2Q7L4E1 593 aa16.08■□□□□ 0.16
ERBB3-215ENST00000550828 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
ERBB3-215ENST00000550828 EHD4Q9H223 541 aa16.08■□□□□ 0.16
ERBB3-215ENST00000550828 PI4KBQ9UBF8 816 aa16.08■□□□□ 0.16
ERBB3-215ENST00000550828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
ERBB3-215ENST00000550828 PTPRFP10586 1907 aa16.07■□□□□ 0.16
ERBB3-215ENST00000550828 JAG1P78504 1218 aa16.07■□□□□ 0.16
ERBB3-215ENST00000550828 C16orf86Q6ZW13 317 aa16.07■□□□□ 0.16
ERBB3-215ENST00000550828 MOB2Q70IA6 237 aa16.07■□□□□ 0.16
ERBB3-215ENST00000550828 TTC6Q86TZ1 520 aa16.07■□□□□ 0.16
ERBB3-215ENST00000550828 KCNB2Q92953 911 aa16.07■□□□□ 0.16
ERBB3-215ENST00000550828 DDRGK1Q96HY6 314 aa16.07■□□□□ 0.16
ERBB3-215ENST00000550828 NEDD4P46934 1319 aa16.06■□□□□ 0.16
ERBB3-215ENST00000550828 PHF20L1A8MW92 1017 aa16.06■□□□□ 0.16
ERBB3-215ENST00000550828 HLA-DOAP06340 250 aa16.06■□□□□ 0.16
ERBB3-215ENST00000550828 HSPA4P34932 840 aa16.06■□□□□ 0.16
ERBB3-215ENST00000550828 VEGFBP49765 207 aa16.06■□□□□ 0.16
ERBB3-215ENST00000550828 CST9Q5W186 159 aa16.06■□□□□ 0.16
ERBB3-215ENST00000550828 WBP1LQ9NX94 342 aa16.06■□□□□ 0.16
ERBB3-215ENST00000550828 CTNNA3Q9UI47 895 aa16.06■□□□□ 0.16
ERBB3-215ENST00000550828 SERPINB13Q9UIV8 391 aa16.06■□□□□ 0.16
ERBB3-215ENST00000550828 EPB41L2O43491 1005 aaKnown RBP16.05■□□□□ 0.16
ERBB3-215ENST00000550828 TBC1D12O60347 775 aa16.05■□□□□ 0.16
ERBB3-215ENST00000550828 USP2O75604 605 aaPredicted RBP16.05■□□□□ 0.16
ERBB3-215ENST00000550828 PRDM1O75626 825 aa16.05■□□□□ 0.16
ERBB3-215ENST00000550828 FGRP09769 529 aa16.05■□□□□ 0.16
ERBB3-215ENST00000550828 CDK8P49336 464 aa16.05■□□□□ 0.16
ERBB3-215ENST00000550828 FOXP4Q8IVH2 680 aaPredicted RBP16.05■□□□□ 0.16
ERBB3-215ENST00000550828 STAG1Q8WVM7 1258 aa16.05■□□□□ 0.16
ERBB3-215ENST00000550828 ZNF213O14771 459 aa16.04■□□□□ 0.16
ERBB3-215ENST00000550828 RASA1P20936 1047 aa16.04■□□□□ 0.16
ERBB3-215ENST00000550828 LBX1P52954 281 aa16.04■□□□□ 0.16
ERBB3-215ENST00000550828 PRKG1Q13976 671 aa16.04■□□□□ 0.16
ERBB3-215ENST00000550828 IMMTQ16891 758 aaKnown RBP16.04■□□□□ 0.16
ERBB3-215ENST00000550828 SUPT20HL1Q3ZLR7 823 aa16.04■□□□□ 0.16
ERBB3-215ENST00000550828 AKNAD1Q5T1N1 836 aa16.04■□□□□ 0.16
ERBB3-215ENST00000550828 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
ERBB3-215ENST00000550828 ZNF408Q9H9D4 720 aa16.04■□□□□ 0.16
ERBB3-215ENST00000550828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.04■□□□□ 0.16
ERBB3-215ENST00000550828 HERC5Q9UII4 1024 aaKnown RBP16.04■□□□□ 0.16
ERBB3-215ENST00000550828 ZNF112Q9UJU3 913 aa16.04■□□□□ 0.16
ERBB3-215ENST00000550828 SNX14Q9Y5W7 946 aa16.04■□□□□ 0.16
ERBB3-215ENST00000550828 THSD7BQ9C0I4 1608 aa16.04■□□□□ 0.16
ERBB3-215ENST00000550828 INPP5BP32019 993 aa16.03■□□□□ 0.16
ERBB3-215ENST00000550828 MAP2K1Q02750 393 aaPredicted RBP16.03■□□□□ 0.16
ERBB3-215ENST00000550828 ADCK5Q3MIX3 580 aa16.03■□□□□ 0.16
ERBB3-215ENST00000550828 AMOTL1Q8IY63 956 aa16.03■□□□□ 0.16
ERBB3-215ENST00000550828 CRACR2BQ8N4Y2 399 aaPredicted RBP16.03■□□□□ 0.16
ERBB3-215ENST00000550828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms