RNA–Protein interactions for RNA: ENST00000549021.5

TGFBR1-206, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2

Gene TGFBR1, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-206ENST00000549021 NUCB1Q02818 461 aa8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 NEXNQ0ZGT2 675 aa8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 LCE2CQ5TA81 110 aa8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 TREML4Q6UXN2 200 aa8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 CAPN12Q6ZSI9 719 aa8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 CCDC155Q8N6L0 562 aa8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 PLBD2Q8NHP8 589 aa8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 HELQQ8TDG4 1101 aa8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 RHBDD1Q8TEB9 315 aa8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 NANOS1Q8WY41 292 aaKnown RBP8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 SMARCC1Q92922 1105 aaPredicted RBP8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 SCHIP1Q9P0W5 487 aaPredicted RBP8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 CHMP3Q9Y3E7 222 aa8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 CASZ1Q86V15 1759 aa8.17□□□□□ -1.1
TGFBR1-206ENST00000549021 ANKRD33BA6NCL7 494 aa8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 IGKV5-2P06315 115 aa8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 NBPF7P0C2Y1 421 aaPredicted RBP8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 RGS3P49796 1198 aa8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 MTMR3Q13615 1198 aa8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 CWF19L2Q2TBE0 894 aaKnown RBP8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 C4orf17Q53FE4 359 aa8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 CHD1LQ86WJ1 897 aa8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 QTRT2Q9H974 415 aaKnown RBP8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 HDAC5Q9UQL6 1122 aa8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 LRRFIP2Q9Y608 721 aaKnown RBP8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 USP3Q9Y6I4 520 aa8.16□□□□□ -1.1
TGFBR1-206ENST00000549021 NEURL1BA8MQ27 555 aa8.15□□□□□ -1.1
TGFBR1-206ENST00000549021 KCNQ2O43526 872 aa8.15□□□□□ -1.1
TGFBR1-206ENST00000549021 FAM13AO94988 1023 aa8.15□□□□□ -1.1
TGFBR1-206ENST00000549021 MTX1Q13505 466 aa8.15□□□□□ -1.1
TGFBR1-206ENST00000549021 TTLL7Q6ZT98 887 aa8.15□□□□□ -1.1
TGFBR1-206ENST00000549021 SLC9A9Q8IVB4 645 aa8.15□□□□□ -1.1
TGFBR1-206ENST00000549021 ZSCAN29Q8IWY8 852 aaPredicted RBP8.15□□□□□ -1.1
TGFBR1-206ENST00000549021 SSH3Q8TE77 659 aa8.15□□□□□ -1.1
TGFBR1-206ENST00000549021 MYD88Q99836 296 aa8.15□□□□□ -1.1
TGFBR1-206ENST00000549021 C9orf78Q9NZ63 289 aaPredicted RBP8.15□□□□□ -1.1
TGFBR1-206ENST00000549021 DCTN4Q9UJW0 460 aa8.15□□□□□ -1.1
TGFBR1-206ENST00000549021 COL15A1P39059 1388 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 PALLDQ8WX93 1383 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 LOC102724428A0A0B4J2F2 783 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 PNMA6EA0A0J9YXQ4 647 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 GRM8O00222 908 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 RHOQP17081 205 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 IL6STP40189 918 aaPredicted RBP8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 SIK1P57059 783 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 GCKRQ14397 625 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 ANKRD45Q5TZF3 282 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 GMCL1Q96IK5 515 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 BACH2Q9BYV9 841 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 LAMB2P55268 1798 aa8.14□□□□□ -1.11
TGFBR1-206ENST00000549021 ITGA6P23229 1130 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 TRIM28Q13263 835 aaKnown RBP8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 TEAD4Q15561 434 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 GNASQ5JWF2 1037 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 TBCELQ5QJ74 424 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 TMEM214Q6NUQ4 689 aaKnown RBP8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 C16orf46Q6P387 395 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 PPP1R42Q7Z4L9 355 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 STAG2Q8N3U4 1231 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 CCDC191Q8NCU4 936 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 KAZALD1Q96I82 304 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 NIFKQ9BYG3 293 aaKnown RBP8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 LNPKQ9C0E8 428 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 ZBTB1Q9Y2K1 713 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 UBR3Q6ZT12 1888 aa8.13□□□□□ -1.11
TGFBR1-206ENST00000549021 C4AP0C0L4 1744 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 C4BP0C0L5 1744 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 MAP3K15Q6ZN16 1313 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 A0A1B0GTH6 734 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 H7C1W4 665 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 WFS1O76024 890 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 EIF5P55010 431 aaKnown RBP8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 PSMA6P60900 246 aaKnown RBP8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 ARHGAP4P98171 946 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 TCIRG1Q13488 830 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 ITPK1Q13572 414 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 ZNF772Q68DY9 489 aaPredicted RBP8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 INTS5Q6P9B9 1019 aaKnown RBP8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 KIF6Q6ZMV9 814 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 GIPC2Q8TF65 315 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 SUCLG2Q96I99 432 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 ISCA1Q9BUE6 129 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 TIMMDC1Q9NPL8 285 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 CCDC87Q9NVE4 849 aa8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 DDX60Q8IY21 1712 aaKnown RBP8.12□□□□□ -1.11
TGFBR1-206ENST00000549021 SCN7AQ01118 1682 aa8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 ERVV-1B6SEH8 477 aa8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 SRGAP3O43295 1099 aa8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 RAB11FIP3O75154 756 aa8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 F11P03951 625 aa8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 GTF2E1P29083 439 aaPredicted RBP8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 CRKLP46109 303 aaKnown RBP8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 HIRAP54198 1017 aaPredicted RBP8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 CASP7P55210 303 aa8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 RBM6P78332 1123 aaKnown RBP8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 C8orf34Q49A92 452 aa8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 FAM182BQ5T319 152 aa8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 PTF1AQ7RTS3 328 aa8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 SLC16A10Q8TF71 515 aa8.11□□□□□ -1.11
TGFBR1-206ENST00000549021 ZDHHC1Q8WTX9 485 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms