RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ATRNO75882 1429 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 ANKRD18BA2A2Z9 1011 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 PRKAB2O43741 272 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 MBD4O95243 580 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 IFNL3Q8IZI9 196 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 MAGEB6Q8N7X4 407 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 STRN4Q9NRL3 753 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 FBXO2Q9UK22 296 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 EFCAB8A8MWE9 144 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 POLR3GO15318 223 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 PDE8BO95263 885 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 FMNL1O95466 1100 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 MMP1P03956 469 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 CTSWP56202 376 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 MTF1Q14872 753 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 KARSQ15046 597 aaKnown RBP16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 NKX1-1Q15270 411 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 NLRP10Q86W26 655 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 IRX2Q9BZI1 471 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 NAPBQ9H115 298 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 TMOD3Q9NYL9 352 aa16.2■□□□□ 0.18
RAPGEF3-218ENST00000548919 PLEKHG2Q9H7P9 1386 aa16.19■□□□□ 0.18
RAPGEF3-218ENST00000548919 IL2RBP14784 551 aa16.19■□□□□ 0.18
RAPGEF3-218ENST00000548919 CASQ1P31415 396 aa16.19■□□□□ 0.18
RAPGEF3-218ENST00000548919 SPECC1LQ69YQ0 1117 aa16.19■□□□□ 0.18
RAPGEF3-218ENST00000548919 OXER1Q8TDS5 423 aa16.19■□□□□ 0.18
RAPGEF3-218ENST00000548919 ARGLU1Q9NWB6 273 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF3-218ENST00000548919 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
RAPGEF3-218ENST00000548919 TNS2Q63HR2 1409 aa16.19■□□□□ 0.18
RAPGEF3-218ENST00000548919 IRS4O14654 1257 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF3-218ENST00000548919 ZNF18P17022 549 aa16.19■□□□□ 0.18
RAPGEF3-218ENST00000548919 TEX35Q5T0J7 233 aa16.18■□□□□ 0.18
RAPGEF3-218ENST00000548919 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
RAPGEF3-218ENST00000548919 FCHSD1Q86WN1 690 aa16.18■□□□□ 0.18
RAPGEF3-218ENST00000548919 RGS22Q8NE09 1264 aa16.18■□□□□ 0.18
RAPGEF3-218ENST00000548919 SMARCE1Q969G3 411 aa16.18■□□□□ 0.18
RAPGEF3-218ENST00000548919 SRRTQ9BXP5 876 aaKnown RBP16.18■□□□□ 0.18
RAPGEF3-218ENST00000548919 PATL2C9JE40 543 aaKnown RBP16.18■□□□□ 0.18
RAPGEF3-218ENST00000548919 LIFRP42702 1097 aa16.18■□□□□ 0.18
RAPGEF3-218ENST00000548919 SAFBQ15424 915 aaKnown RBP eCLIP16.18■□□□□ 0.18
RAPGEF3-218ENST00000548919 TRMT112Q9UI30 125 aaKnown RBP16.18■□□□□ 0.18
RAPGEF3-218ENST00000548919 MAP3K15Q6ZN16 1313 aa16.18■□□□□ 0.18
RAPGEF3-218ENST00000548919 A0A0U1RQJ8 604 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 SASH3O75995 380 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 IFNAR1P17181 557 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 PTPREP23469 700 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 CASP1P29466 404 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 MAP3K9P80192 1104 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 MORC3Q14149 939 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 ATRIPQ8WXE1 791 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 TEX13AQ9BXU3 409 aaPredicted RBP16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 HOOK1Q9UJC3 728 aaKnown RBP16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 FAM205CA6NFA0 338 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 STX10O60499 249 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 ARID4AP29374 1257 aaPredicted RBP16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 SARSP49591 514 aaKnown RBP16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 PPP2R3AQ06190 1150 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 NUP133Q8WUM0 1156 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 ZNF512BQ96KM6 892 aaPredicted RBP16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 MPHOSPH8Q99549 860 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 ZSWIM4Q9H7M6 989 aa16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 MRPL44Q9H9J2 332 aaKnown RBP16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 ZCCHC17Q9NP64 241 aaKnown RBP16.17■□□□□ 0.18
RAPGEF3-218ENST00000548919 STK36Q9NRP7 1315 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 GSG1L2A8MUP6 293 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 ZBTB22O15209 634 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 TEX33O43247 280 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 MYO1BO43795 1136 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 RTN1Q16799 776 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 AKNAD1Q5T1N1 836 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 KLHL10Q6JEL2 608 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 MFSD6Q6ZSS7 791 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 SPATA5Q8NB90 893 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 CPLX3Q8WVH0 158 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 PIGBQ92521 554 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 KIFC2Q96AC6 838 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 DHX58Q96C10 678 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 CCDC34Q96HJ3 373 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 MRFAP1Q9Y605 127 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 KAT6BQ8WYB5 2073 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 SOWAHDA6NJG2 315 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 STX17P56962 302 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 RASGRF1Q13972 1273 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 MLKLQ8NB16 471 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 ENOX1Q8TC92 643 aaKnown RBP16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 ZBTB9Q96C00 473 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 CABP5Q9NP86 173 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 RAI14Q9P0K7 980 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 CHD4Q14839 1912 aa16.16■□□□□ 0.18
RAPGEF3-218ENST00000548919 ACTN4O43707 911 aaKnown RBP16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 NT5DC1Q5TFE4 455 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 TRIM22Q8IYM9 498 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 LZTFL1Q9NQ48 299 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 CDHR2Q9BYE9 1310 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 hCG_1642624A0A1W2PR95 340 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 TBC1D8O95759 1140 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 AFMP43652 599 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 WTAPQ15007 396 aa16.15■□□□□ 0.18
RAPGEF3-218ENST00000548919 TAF3Q5VWG9 929 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms