RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 STK11IPQ8N1F8 1099 aa7.69□□□□□ -1.18
CCDC38-206ENST00000548771 FAM181AQ8N9Y4 354 aa7.69□□□□□ -1.18
CCDC38-206ENST00000548771 AGBL5Q8NDL9 886 aa7.69□□□□□ -1.18
CCDC38-206ENST00000548771 KRTAP4-11Q9BYQ6 195 aa7.69□□□□□ -1.18
CCDC38-206ENST00000548771 RNF19AQ9NV58 838 aa7.69□□□□□ -1.18
CCDC38-206ENST00000548771 SLC5A6Q9Y289 635 aa7.69□□□□□ -1.18
CCDC38-206ENST00000548771 AK5Q9Y6K8 562 aa7.69□□□□□ -1.18
CCDC38-206ENST00000548771 PRPF40AO75400 957 aaKnown RBP7.68□□□□□ -1.18
CCDC38-206ENST00000548771 INPP5AQ14642 412 aa7.68□□□□□ -1.18
CCDC38-206ENST00000548771 SND1Q7KZF4 910 aaKnown RBP eCLIP7.68□□□□□ -1.18
CCDC38-206ENST00000548771 CYFIP1Q7L576 1253 aa7.68□□□□□ -1.18
CCDC38-206ENST00000548771 GAL3ST3Q96A11 431 aa7.68□□□□□ -1.18
CCDC38-206ENST00000548771 ACSBG1Q96GR2 724 aa7.68□□□□□ -1.18
CCDC38-206ENST00000548771 TNKS2Q9H2K2 1166 aa7.68□□□□□ -1.18
CCDC38-206ENST00000548771 VAV3Q9UKW4 847 aa7.68□□□□□ -1.18
CCDC38-206ENST00000548771 CSADQ9Y600 493 aa7.68□□□□□ -1.18
CCDC38-206ENST00000548771 IGF2BP3O00425 579 aaKnown RBP eCLIP7.67□□□□□ -1.18
CCDC38-206ENST00000548771 BNIP3Q12983 259 aa7.67□□□□□ -1.18
CCDC38-206ENST00000548771 FBLN7Q53RD9 439 aa7.67□□□□□ -1.18
CCDC38-206ENST00000548771 PCDHA4Q9UN74 947 aa7.67□□□□□ -1.18
CCDC38-206ENST00000548771 KRTAP9-7A8MTY7 169 aa7.66□□□□□ -1.18
CCDC38-206ENST00000548771 PRKCQQ04759 706 aa7.66□□□□□ -1.18
CCDC38-206ENST00000548771 IFI16Q16666 785 aaKnown RBP7.66□□□□□ -1.18
CCDC38-206ENST00000548771 DNAJC14Q6Y2X3 702 aaPredicted RBP7.66□□□□□ -1.18
CCDC38-206ENST00000548771 TOP6BLQ8N6T0 577 aa7.66□□□□□ -1.18
CCDC38-206ENST00000548771 SSU72Q9NP77 194 aaKnown RBP7.66□□□□□ -1.18
CCDC38-206ENST00000548771 ANKRD33BA6NCL7 494 aa7.65□□□□□ -1.18
CCDC38-206ENST00000548771 CEACAM5P06731 702 aa7.65□□□□□ -1.18
CCDC38-206ENST00000548771 CD8BP10966 210 aa7.65□□□□□ -1.18
CCDC38-206ENST00000548771 EIF4BP23588 611 aaKnown RBP7.65□□□□□ -1.18
CCDC38-206ENST00000548771 PLCL1Q15111 1095 aa7.65□□□□□ -1.18
CCDC38-206ENST00000548771 ZNF792Q3KQV3 632 aa7.65□□□□□ -1.18
CCDC38-206ENST00000548771 LRFN4Q6PJG9 635 aa7.65□□□□□ -1.18
CCDC38-206ENST00000548771 PRDM10Q9NQV6 1147 aa7.65□□□□□ -1.18
CCDC38-206ENST00000548771 DBX1A6NMT0 343 aa7.64□□□□□ -1.19
CCDC38-206ENST00000548771 EOMESO95936 686 aa7.64□□□□□ -1.19
CCDC38-206ENST00000548771 FUT4P22083 530 aa7.64□□□□□ -1.19
CCDC38-206ENST00000548771 CAP2P40123 477 aa7.64□□□□□ -1.19
CCDC38-206ENST00000548771 RPS26P62854 115 aaKnown RBP7.64□□□□□ -1.19
CCDC38-206ENST00000548771 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.64□□□□□ -1.19
CCDC38-206ENST00000548771 NPAS4Q8IUM7 802 aa7.64□□□□□ -1.19
CCDC38-206ENST00000548771 KCT2Q8NC54 265 aa7.64□□□□□ -1.19
CCDC38-206ENST00000548771 DUSP9Q99956 384 aaKnown RBP7.64□□□□□ -1.19
CCDC38-206ENST00000548771 TTF2Q9UNY4 1162 aaKnown RBP7.64□□□□□ -1.19
CCDC38-206ENST00000548771 SNX11Q9Y5W9 270 aa7.64□□□□□ -1.19
CCDC38-206ENST00000548771 CDK8P49336 464 aa7.63□□□□□ -1.19
CCDC38-206ENST00000548771 FGD1P98174 961 aa7.63□□□□□ -1.19
CCDC38-206ENST00000548771 SLBPQ14493 270 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCDC38-206ENST00000548771 TTBK2Q6IQ55 1244 aa7.63□□□□□ -1.19
CCDC38-206ENST00000548771 PLPPR2Q96GM1 343 aa7.63□□□□□ -1.19
CCDC38-206ENST00000548771 SNCAIPQ9Y6H5 919 aa7.63□□□□□ -1.19
CCDC38-206ENST00000548771 TMEM265A0A087WTH1 108 aa7.62□□□□□ -1.19
CCDC38-206ENST00000548771 GFRA2O00451 464 aa7.62□□□□□ -1.19
CCDC38-206ENST00000548771 NKPD1Q17RQ9 610 aa7.62□□□□□ -1.19
CCDC38-206ENST00000548771 EAPPQ56P03 285 aaPredicted RBP7.62□□□□□ -1.19
CCDC38-206ENST00000548771 AGMOQ6ZNB7 445 aa7.62□□□□□ -1.19
CCDC38-206ENST00000548771 ZNF507Q8TCN5 953 aa7.62□□□□□ -1.19
CCDC38-206ENST00000548771 WNT10AQ9GZT5 417 aa7.62□□□□□ -1.19
CCDC38-206ENST00000548771 FBRSQ9HAH7 460 aa7.62□□□□□ -1.19
CCDC38-206ENST00000548771 PCDHB5Q9Y5E4 795 aa7.62□□□□□ -1.19
CCDC38-206ENST00000548771 CNTNAP4Q9C0A0 1308 aa7.61□□□□□ -1.19
CCDC38-206ENST00000548771 LRIG2O94898 1065 aa7.61□□□□□ -1.19
CCDC38-206ENST00000548771 CD96P40200 585 aa7.61□□□□□ -1.19
CCDC38-206ENST00000548771 DAB2P98082 770 aa7.61□□□□□ -1.19
CCDC38-206ENST00000548771 AOC3Q16853 763 aa7.61□□□□□ -1.19
CCDC38-206ENST00000548771 SPACA3Q8IXA5 215 aa7.61□□□□□ -1.19
CCDC38-206ENST00000548771 ELMO3Q96BJ8 720 aa7.61□□□□□ -1.19
CCDC38-206ENST00000548771 GTF2IRD1Q9UHL9 959 aa7.61□□□□□ -1.19
CCDC38-206ENST00000548771 SLITRK5O94991 958 aa7.6□□□□□ -1.19
CCDC38-206ENST00000548771 NKG7Q16617 165 aa7.6□□□□□ -1.19
CCDC38-206ENST00000548771 ARMCX6Q7L4S7 300 aa7.6□□□□□ -1.19
CCDC38-206ENST00000548771 HDXQ7Z353 690 aa7.6□□□□□ -1.19
CCDC38-206ENST00000548771 FBXO33Q7Z6M2 555 aa7.6□□□□□ -1.19
CCDC38-206ENST00000548771 HRASLS5Q96KN8 279 aa7.6□□□□□ -1.19
CCDC38-206ENST00000548771 MBNL3Q9NUK0 354 aaKnown RBP7.6□□□□□ -1.19
CCDC38-206ENST00000548771 PARP2Q9UGN5 583 aa7.6□□□□□ -1.19
CCDC38-206ENST00000548771 ADAMTS6Q9UKP5 1117 aa7.6□□□□□ -1.19
CCDC38-206ENST00000548771 USP31Q70CQ4 1352 aa7.59□□□□□ -1.19
CCDC38-206ENST00000548771 RNASE1P07998 156 aaKnown RBP7.59□□□□□ -1.19
CCDC38-206ENST00000548771 CTSHP09668 335 aa7.59□□□□□ -1.19
CCDC38-206ENST00000548771 CCDC85BQ15834 202 aaPredicted RBP7.59□□□□□ -1.19
CCDC38-206ENST00000548771 MEI1Q5TIA1 1274 aa7.59□□□□□ -1.19
CCDC38-206ENST00000548771 C22orf34Q6ZV56 151 aa7.59□□□□□ -1.19
CCDC38-206ENST00000548771 CDC37L1Q7L3B6 337 aa7.59□□□□□ -1.19
CCDC38-206ENST00000548771 AEBP1Q8IUX7 1158 aa7.59□□□□□ -1.19
CCDC38-206ENST00000548771 FAM168AQ92567 244 aa7.59□□□□□ -1.19
CCDC38-206ENST00000548771 FOXQ1Q9C009 403 aa7.59□□□□□ -1.19
CCDC38-206ENST00000548771 TACC3Q9Y6A5 838 aa7.59□□□□□ -1.19
CCDC38-206ENST00000548771 FARP2O94887 1054 aaPredicted RBP7.58□□□□□ -1.2
CCDC38-206ENST00000548771 LIG3P49916 1009 aa7.58□□□□□ -1.2
CCDC38-206ENST00000548771 WIPI1Q5MNZ9 446 aaPredicted RBP7.58□□□□□ -1.2
CCDC38-206ENST00000548771 KRTAP4-5Q9BYR2 181 aa7.58□□□□□ -1.2
CCDC38-206ENST00000548771 PICK1Q9NRD5 415 aa7.58□□□□□ -1.2
CCDC38-206ENST00000548771 MAPK8IP1Q9UQF2 711 aa7.58□□□□□ -1.2
CCDC38-206ENST00000548771 PRAMEF27A3QJZ7 478 aa7.57□□□□□ -1.2
CCDC38-206ENST00000548771 BIN1O00499 593 aa7.57□□□□□ -1.2
CCDC38-206ENST00000548771 PDIA4P13667 645 aaKnown RBP7.57□□□□□ -1.2
CCDC38-206ENST00000548771 TFE3P19532 575 aaPredicted RBP7.57□□□□□ -1.2
CCDC38-206ENST00000548771 ST13P50502 369 aaKnown RBP7.57□□□□□ -1.2
CCDC38-206ENST00000548771 TMC4Q7Z404 712 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms