RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 TTC39AQ5SRH9 613 aa19.68■□□□□ 0.74
RAPGEF3-217ENST00000548434 CAP2P40123 477 aa19.67■□□□□ 0.74
RAPGEF3-217ENST00000548434 ARHGEF6Q15052 776 aa19.67■□□□□ 0.74
RAPGEF3-217ENST00000548434 NAA16Q6N069 864 aaPredicted RBP19.67■□□□□ 0.74
RAPGEF3-217ENST00000548434 FASTKD5Q7L8L6 764 aaKnown RBP19.67■□□□□ 0.74
RAPGEF3-217ENST00000548434 TEX11Q8IYF3 940 aa19.67■□□□□ 0.74
RAPGEF3-217ENST00000548434 PICK1Q9NRD5 415 aa19.67■□□□□ 0.74
RAPGEF3-217ENST00000548434 ZBTB40Q9NUA8 1239 aa19.67■□□□□ 0.74
RAPGEF3-217ENST00000548434 SRRDQ9UH36 339 aa19.67■□□□□ 0.74
RAPGEF3-217ENST00000548434 MYH1P12882 1939 aa19.66■□□□□ 0.74
RAPGEF3-217ENST00000548434 OSBPP22059 807 aa19.66■□□□□ 0.74
RAPGEF3-217ENST00000548434 PSMC4P43686 418 aa19.66■□□□□ 0.74
RAPGEF3-217ENST00000548434 PRMT2P55345 433 aa19.66■□□□□ 0.74
RAPGEF3-217ENST00000548434 PRPF38BQ5VTL8 546 aaKnown RBP19.66■□□□□ 0.74
RAPGEF3-217ENST00000548434 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.66■□□□□ 0.74
RAPGEF3-217ENST00000548434 AATFQ9NY61 560 aaKnown RBP eCLIP19.66■□□□□ 0.74
RAPGEF3-217ENST00000548434 EXOC6BQ9Y2D4 811 aa19.66■□□□□ 0.74
RAPGEF3-217ENST00000548434 ANTXR1Q9H6X2 564 aa19.65■□□□□ 0.74
RAPGEF3-217ENST00000548434 NDUFB9Q9Y6M9 179 aa19.65■□□□□ 0.74
RAPGEF3-217ENST00000548434 DYNLL1P63167 89 aaKnown RBP19.64■□□□□ 0.73
RAPGEF3-217ENST00000548434 OS9Q13438 667 aaPredicted RBP19.64■□□□□ 0.73
RAPGEF3-217ENST00000548434 SLC9C1Q4G0N8 1177 aa19.64■□□□□ 0.73
RAPGEF3-217ENST00000548434 SH3D19Q5HYK7 790 aa19.64■□□□□ 0.73
RAPGEF3-217ENST00000548434 TREML2Q5T2D2 321 aa19.64■□□□□ 0.73
RAPGEF3-217ENST00000548434 SH3TC2Q8TF17 1288 aa19.64■□□□□ 0.73
RAPGEF3-217ENST00000548434 PARK7Q99497 189 aaKnown RBP19.64■□□□□ 0.73
RAPGEF3-217ENST00000548434 PI4KBQ9UBF8 816 aa19.64■□□□□ 0.73
RAPGEF3-217ENST00000548434 HERC5Q9UII4 1024 aaKnown RBP19.64■□□□□ 0.73
RAPGEF3-217ENST00000548434 FLT1P17948 1338 aa19.64■□□□□ 0.73
RAPGEF3-217ENST00000548434 SHROOM1Q2M3G4 852 aaPredicted RBP19.63■□□□□ 0.73
RAPGEF3-217ENST00000548434 TGFBRAP1Q8WUH2 860 aa19.63■□□□□ 0.73
RAPGEF3-217ENST00000548434 DHX36Q9H2U1 1008 aaKnown RBP19.63■□□□□ 0.73
RAPGEF3-217ENST00000548434 AGTPBP1Q9UPW5 1226 aa19.63■□□□□ 0.73
RAPGEF3-217ENST00000548434 DDX60LQ5H9U9 1706 aaKnown RBP19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 CEP290O15078 2479 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 TRIM75PA6NK02 468 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 BAG3O95817 575 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 PLCG2P16885 1265 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 SPP2Q13103 211 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 KIF22Q14807 665 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 GADL1Q6ZQY3 521 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 NBPF11Q86T75 865 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 FOXP4Q8IVH2 680 aaPredicted RBP19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 MAPKAPK5Q8IW41 473 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 PROCA1Q8NCQ7 364 aaPredicted RBP19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 ZNF280CQ8ND82 737 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 RHPN1Q8TCX5 695 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 WDR18Q9BV38 432 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 PALD1Q9ULE6 856 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 GABRQQ9UN88 632 aa19.62■□□□□ 0.73
RAPGEF3-217ENST00000548434 PLXNB2O15031 1838 aa19.61■□□□□ 0.73
RAPGEF3-217ENST00000548434 RPAP2Q8IXW5 612 aaPredicted RBP19.61■□□□□ 0.73
RAPGEF3-217ENST00000548434 TBC1D2Q9BYX2 928 aa19.61■□□□□ 0.73
RAPGEF3-217ENST00000548434 USP17L5A8MUK1 530 aa19.6■□□□□ 0.73
RAPGEF3-217ENST00000548434 CYP7A1P22680 504 aa19.6■□□□□ 0.73
RAPGEF3-217ENST00000548434 MTFR1Q15390 333 aa19.6■□□□□ 0.73
RAPGEF3-217ENST00000548434 ERC1Q8IUD2 1116 aa19.6■□□□□ 0.73
RAPGEF3-217ENST00000548434 SHISA4Q96DD7 197 aa19.6■□□□□ 0.73
RAPGEF3-217ENST00000548434 COG6Q9Y2V7 657 aa19.6■□□□□ 0.73
RAPGEF3-217ENST00000548434 PRKCZQ05513 592 aa19.59■□□□□ 0.73
RAPGEF3-217ENST00000548434 TMED8Q6PL24 325 aaPredicted RBP19.59■□□□□ 0.73
RAPGEF3-217ENST00000548434 POTEEQ6S8J3 1075 aa19.59■□□□□ 0.73
RAPGEF3-217ENST00000548434 UBE2Q1Q7Z7E8 422 aa19.59■□□□□ 0.73
RAPGEF3-217ENST00000548434 AACSQ86V21 672 aa19.59■□□□□ 0.73
RAPGEF3-217ENST00000548434 RIOK1Q9BRS2 568 aaKnown RBP19.59■□□□□ 0.73
RAPGEF3-217ENST00000548434 IL1RAPL2Q9NP60 686 aa19.59■□□□□ 0.73
RAPGEF3-217ENST00000548434 ECM2O94769 699 aaPredicted RBP19.58■□□□□ 0.72
RAPGEF3-217ENST00000548434 FMNL1O95466 1100 aaPredicted RBP19.58■□□□□ 0.72
RAPGEF3-217ENST00000548434 C20orf194Q5TEA3 1177 aa19.58■□□□□ 0.72
RAPGEF3-217ENST00000548434 TATDN1Q6P1N9 297 aa19.58■□□□□ 0.72
RAPGEF3-217ENST00000548434 DDX19BQ9UMR2 479 aa19.58■□□□□ 0.72
RAPGEF3-217ENST00000548434 MYPNQ86TC9 1320 aa19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 TCRBV5S4A2TA0A5A2 114 aa19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 MS4A1P11836 297 aa19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 HOXD10P28358 340 aa19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 GRK4P32298 578 aa19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 HMGCS2P54868 508 aa19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 MAGEB6Q8N7X4 407 aa19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 MIGA1Q8NAN2 632 aa19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 TMEM106CQ9BVX2 250 aa19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 GINM1Q9NU53 330 aa19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 RCAN3Q9UKA8 241 aa19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 RANBP2P49792 3224 aaKnown RBP19.57■□□□□ 0.72
RAPGEF3-217ENST00000548434 IDH1O75874 414 aaKnown RBP19.56■□□□□ 0.72
RAPGEF3-217ENST00000548434 HOXA7P31268 230 aaPredicted RBP19.56■□□□□ 0.72
RAPGEF3-217ENST00000548434 FCGRTP55899 365 aa19.56■□□□□ 0.72
RAPGEF3-217ENST00000548434 BACE1P56817 501 aa19.56■□□□□ 0.72
RAPGEF3-217ENST00000548434 IRF5Q13568 498 aa19.56■□□□□ 0.72
RAPGEF3-217ENST00000548434 FAM110CQ1W6H9 321 aa19.56■□□□□ 0.72
RAPGEF3-217ENST00000548434 HSP90AB4PQ58FF6 505 aa19.56■□□□□ 0.72
RAPGEF3-217ENST00000548434 KIF1BPQ96EK5 621 aa19.56■□□□□ 0.72
RAPGEF3-217ENST00000548434 NOL10Q9BSC4 688 aaKnown RBP19.56■□□□□ 0.72
RAPGEF3-217ENST00000548434 ASCC2Q9H1I8 757 aaPredicted RBP19.56■□□□□ 0.72
RAPGEF3-217ENST00000548434 SAP30BPQ9UHR5 308 aaKnown RBP19.56■□□□□ 0.72
RAPGEF3-217ENST00000548434 ASNSP08243 561 aa19.55■□□□□ 0.72
RAPGEF3-217ENST00000548434 ANKRD13CQ8N6S4 541 aa19.55■□□□□ 0.72
RAPGEF3-217ENST00000548434 EHD4Q9H223 541 aa19.55■□□□□ 0.72
RAPGEF3-217ENST00000548434 GJD2Q9UKL4 321 aa19.55■□□□□ 0.72
RAPGEF3-217ENST00000548434 FLT3LGP49771 235 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms