RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 CDC37L1Q7L3B6 337 aa9.53□□□□□ -0.88
CCDC65-203ENST00000547861 CHST3Q7LGC8 479 aa9.53□□□□□ -0.88
CCDC65-203ENST00000547861 JDP2Q8WYK2 163 aa9.53□□□□□ -0.88
CCDC65-203ENST00000547861 RBM17Q96I25 401 aaKnown RBP9.53□□□□□ -0.88
CCDC65-203ENST00000547861 STRBPQ96SI9 672 aaKnown RBP9.53□□□□□ -0.88
CCDC65-203ENST00000547861 PSMD1Q99460 953 aa9.53□□□□□ -0.88
CCDC65-203ENST00000547861 CNPY2Q9Y2B0 182 aa9.53□□□□□ -0.88
CCDC65-203ENST00000547861 WDR19Q8NEZ3 1342 aa9.52□□□□□ -0.88
CCDC65-203ENST00000547861 PASKQ96RG2 1323 aa9.52□□□□□ -0.88
CCDC65-203ENST00000547861 SNED1Q8TER0 1413 aa9.52□□□□□ -0.88
CCDC65-203ENST00000547861 ZNF646O15015 1829 aaPredicted RBP9.52□□□□□ -0.89
CCDC65-203ENST00000547861 ZNF213O14771 459 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 ITGBL1O95965 494 aaPredicted RBP9.52□□□□□ -0.89
CCDC65-203ENST00000547861 MBD3O95983 291 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 PDCP20941 246 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 ALX1Q15699 326 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 GPC2Q8N158 579 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 LCORLQ8N3X6 602 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 FBXL16Q8N461 479 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 NCOA7Q8NI08 942 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 ARMT1Q9H993 441 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 GDPD2Q9HCC8 539 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 GNL3LQ9NVN8 582 aaKnown RBP9.52□□□□□ -0.89
CCDC65-203ENST00000547861 RBM27Q9P2N5 1060 aaKnown RBP9.52□□□□□ -0.89
CCDC65-203ENST00000547861 ISY1Q9ULR0 285 aaKnown RBP9.52□□□□□ -0.89
CCDC65-203ENST00000547861 NSFL1CQ9UNZ2 370 aaKnown RBP9.52□□□□□ -0.89
CCDC65-203ENST00000547861 GJA3Q9Y6H8 435 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 IRS2Q9Y4H2 1338 aa9.52□□□□□ -0.89
CCDC65-203ENST00000547861 COL4A5P29400 1685 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 RIOK3O14730 519 aaKnown RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 PPEF1O14829 653 aaPredicted RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 PRC1O43663 620 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 NCLP19338 710 aaKnown RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 EIF6P56537 245 aaKnown RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 LARP1BQ659C4 914 aaKnown RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 RALYLQ86SE5 291 aaKnown RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 LARGE2Q8N3Y3 721 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 NSUN7Q8NE18 718 aaKnown RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 SMARCC2Q8TAQ2 1214 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 MS4A4AQ96JQ5 239 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 FAM84BQ96KN1 310 aaPredicted RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 CRAMP1Q96RY5 1269 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 ANKRD2Q9GZV1 360 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 GPHNQ9NQX3 736 aaPredicted RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 ATP6V1DQ9Y5K8 247 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 NEDD4P46934 1319 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 PDS5AQ29RF7 1337 aaKnown RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 SALL1Q9NSC2 1324 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 ADAMTSL1Q8N6G6 1762 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 CNTNAP1P78357 1384 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 TMEM88BA6NKF7 163 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 GADD45BO75293 160 aaPredicted RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 CTDNEP1O95476 244 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 APPP05067 770 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 MCM5P33992 734 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 GRAPQ13588 217 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 ZSCAN23Q3MJ62 389 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 CAVIN4Q5BKX8 364 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 MAP1SQ66K74 1059 aaPredicted RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 FBXO33Q7Z6M2 555 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 ADGRA1Q86SQ6 560 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 USP48Q86UV5 1035 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 PNMA8AQ86V59 439 aaPredicted RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 GAS2L3Q86XJ1 694 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 GRAPLQ8TC17 118 aaPredicted RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 RNF166Q96A37 237 aaPredicted RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 ZNF274Q96GC6 653 aaPredicted RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 LLPHQ9BRT6 129 aaKnown RBP9.51□□□□□ -0.89
CCDC65-203ENST00000547861 TMEM63CQ9P1W3 806 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 LRP2BPQ9P2M1 347 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 DENND2AQ9ULE3 1009 aa9.51□□□□□ -0.89
CCDC65-203ENST00000547861 PTPDC1A2A3K4 754 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 GSG1L2A8MUP6 293 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 SEMA3EO15041 775 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 FIBPO43427 364 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 PDIA3P30101 505 aaKnown RBP9.5□□□□□ -0.89
CCDC65-203ENST00000547861 EVCP57679 992 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 ZNF445P59923 1031 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 VPS37DQ86XT2 251 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 IFNL3Q8IZI9 196 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 ZNF687Q8N1G0 1237 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 NKX2-3Q8TAU0 364 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 NAPBQ9H115 298 aa9.5□□□□□ -0.89
CCDC65-203ENST00000547861 NCOA5Q9HCD5 579 aaKnown RBP9.5□□□□□ -0.89
CCDC65-203ENST00000547861 GOLGA8BA8MQT2 603 aa9.49□□□□□ -0.89
CCDC65-203ENST00000547861 PATL2C9JE40 543 aaKnown RBP9.49□□□□□ -0.89
CCDC65-203ENST00000547861 PRKAB2O43741 272 aa9.49□□□□□ -0.89
CCDC65-203ENST00000547861 XRCC6P12956 609 aaKnown RBP eCLIP9.49□□□□□ -0.89
CCDC65-203ENST00000547861 GNAT2P19087 354 aa9.49□□□□□ -0.89
CCDC65-203ENST00000547861 CYP7A1P22680 504 aa9.49□□□□□ -0.89
CCDC65-203ENST00000547861 LMOD1P29536 600 aaPredicted RBP9.49□□□□□ -0.89
CCDC65-203ENST00000547861 VEGFBP49765 207 aa9.49□□□□□ -0.89
CCDC65-203ENST00000547861 CCT2P78371 535 aaKnown RBP9.49□□□□□ -0.89
CCDC65-203ENST00000547861 DNM1Q05193 864 aaKnown RBP9.49□□□□□ -0.89
CCDC65-203ENST00000547861 GRIPAP1Q4V328 841 aa9.49□□□□□ -0.89
CCDC65-203ENST00000547861 CYB5R4Q7L1T6 521 aa9.49□□□□□ -0.89
CCDC65-203ENST00000547861 FERMT3Q86UX7 667 aa9.49□□□□□ -0.89
CCDC65-203ENST00000547861 MIGA1Q8NAN2 632 aa9.49□□□□□ -0.89
CCDC65-203ENST00000547861 DDX11Q96FC9 970 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms