RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 WWC3Q9ULE0 1092 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 SNX11Q9Y5W9 270 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 PNMA6FA0A0J9YX94 578 aa7.02□□□□□ -1.29
SCAF11-210ENST00000547654 XRCC5P13010 732 aaKnown RBP7.02□□□□□ -1.29
SCAF11-210ENST00000547654 ERVK-24P63145 666 aa7.02□□□□□ -1.29
SCAF11-210ENST00000547654 FBLN7Q53RD9 439 aa7.02□□□□□ -1.29
SCAF11-210ENST00000547654 TMCO4Q5TGY1 634 aa7.02□□□□□ -1.29
SCAF11-210ENST00000547654 SPOCD1Q6ZMY3 1216 aa7.02□□□□□ -1.29
SCAF11-210ENST00000547654 RNF214Q8ND24 703 aa7.02□□□□□ -1.29
SCAF11-210ENST00000547654 STK35Q8TDR2 534 aa7.02□□□□□ -1.29
SCAF11-210ENST00000547654 BCO2Q9BYV7 579 aa7.02□□□□□ -1.29
SCAF11-210ENST00000547654 TNKS2Q9H2K2 1166 aa7.02□□□□□ -1.29
SCAF11-210ENST00000547654 FAM53CQ9NYF3 392 aa7.02□□□□□ -1.29
SCAF11-210ENST00000547654 P4HBP07237 508 aaKnown RBP7.01□□□□□ -1.29
SCAF11-210ENST00000547654 ZP2Q05996 745 aa7.01□□□□□ -1.29
SCAF11-210ENST00000547654 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.01□□□□□ -1.29
SCAF11-210ENST00000547654 ZC3H12AQ5D1E8 599 aaKnown RBP7.01□□□□□ -1.29
SCAF11-210ENST00000547654 EMILIN2Q9BXX0 1053 aa7.01□□□□□ -1.29
SCAF11-210ENST00000547654 CBX8Q9HC52 389 aa7.01□□□□□ -1.29
SCAF11-210ENST00000547654 AKAP2Q9Y2D5 859 aa7.01□□□□□ -1.29
SCAF11-210ENST00000547654 GNAT3A8MTJ3 354 aa7□□□□□ -1.29
SCAF11-210ENST00000547654 ARNTP27540 789 aa7□□□□□ -1.29
SCAF11-210ENST00000547654 MLANAQ16655 118 aa7□□□□□ -1.29
SCAF11-210ENST00000547654 NXPE4Q6UWF7 544 aa7□□□□□ -1.29
SCAF11-210ENST00000547654 FBF1Q8TES7 1133 aa7□□□□□ -1.29
SCAF11-210ENST00000547654 HEXIM2Q96MH2 286 aaKnown RBP7□□□□□ -1.29
SCAF11-210ENST00000547654 NME2P22392 152 aa6.99□□□□□ -1.29
SCAF11-210ENST00000547654 BHLHE22Q8NFJ8 381 aaPredicted RBP6.99□□□□□ -1.29
SCAF11-210ENST00000547654 GPBAR1Q8TDU6 330 aa6.99□□□□□ -1.29
SCAF11-210ENST00000547654 PRDM10Q9NQV6 1147 aa6.99□□□□□ -1.29
SCAF11-210ENST00000547654 RNF19AQ9NV58 838 aa6.99□□□□□ -1.29
SCAF11-210ENST00000547654 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.99□□□□□ -1.292e-7■□□□□ 11.1
SCAF11-210ENST00000547654 CLCN7P51798 805 aa6.98□□□□□ -1.29
SCAF11-210ENST00000547654 ZNF252P-AS1Q0IIN9 211 aa6.98□□□□□ -1.29
SCAF11-210ENST00000547654 MESP2Q0VG99 397 aa6.98□□□□□ -1.29
SCAF11-210ENST00000547654 RASIP1Q5U651 963 aa6.98□□□□□ -1.29
SCAF11-210ENST00000547654 SND1Q7KZF4 910 aaKnown RBP eCLIP6.98□□□□□ -1.29
SCAF11-210ENST00000547654 SPACA3Q8IXA5 215 aa6.98□□□□□ -1.29
SCAF11-210ENST00000547654 IGF2BP3O00425 579 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCAF11-210ENST00000547654 RAP1GAPP47736 663 aa6.97□□□□□ -1.29
SCAF11-210ENST00000547654 PPM1JQ5JR12 505 aa6.97□□□□□ -1.29
SCAF11-210ENST00000547654 TOX2Q96NM4 488 aa6.97□□□□□ -1.29
SCAF11-210ENST00000547654 PPP1R16BQ96T49 567 aa6.97□□□□□ -1.29
SCAF11-210ENST00000547654 CTNND2Q9UQB3 1225 aa6.97□□□□□ -1.29
SCAF11-210ENST00000547654 CSADQ9Y600 493 aa6.97□□□□□ -1.29
SCAF11-210ENST00000547654 ZNF503-AS2A6NEH8 195 aa6.96□□□□□ -1.3
SCAF11-210ENST00000547654 AFMP43652 599 aa6.96□□□□□ -1.3
SCAF11-210ENST00000547654 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
SCAF11-210ENST00000547654 MPZL3Q6UWV2 235 aa6.96□□□□□ -1.3
SCAF11-210ENST00000547654 CDC37L1Q7L3B6 337 aa6.96□□□□□ -1.3
SCAF11-210ENST00000547654 NPAS4Q8IUM7 802 aa6.96□□□□□ -1.3
SCAF11-210ENST00000547654 NECAB3Q96P71 396 aaPredicted RBP6.96□□□□□ -1.3
SCAF11-210ENST00000547654 PRDM5Q9NQX1 630 aaPredicted RBP6.96□□□□□ -1.3
SCAF11-210ENST00000547654 SAMM50Q9Y512 469 aa6.96□□□□□ -1.3
SCAF11-210ENST00000547654 PITPNM2Q9BZ72 1349 aa6.96□□□□□ -1.3
SCAF11-210ENST00000547654 PATL2C9JE40 543 aaKnown RBP6.95□□□□□ -1.3
SCAF11-210ENST00000547654 ENC1O14682 589 aa6.95□□□□□ -1.3
SCAF11-210ENST00000547654 BMP6P22004 513 aa6.95□□□□□ -1.3
SCAF11-210ENST00000547654 ZSCAN29Q8IWY8 852 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-210ENST00000547654 LIN37Q96GY3 246 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-210ENST00000547654 FOXQ1Q9C009 403 aa6.95□□□□□ -1.3
SCAF11-210ENST00000547654 DCDC2CA8MYV0 355 aa6.94□□□□□ -1.3
SCAF11-210ENST00000547654 PAGE1O75459 146 aa6.94□□□□□ -1.3
SCAF11-210ENST00000547654 TSPAN15O95858 294 aa6.94□□□□□ -1.3
SCAF11-210ENST00000547654 MFAP1P55081 439 aaKnown RBP6.94□□□□□ -1.3
SCAF11-210ENST00000547654 NKPD1Q17RQ9 610 aa6.94□□□□□ -1.3
SCAF11-210ENST00000547654 FAM214BQ7L5A3 538 aa6.94□□□□□ -1.3
SCAF11-210ENST00000547654 FBXO33Q7Z6M2 555 aa6.94□□□□□ -1.3
SCAF11-210ENST00000547654 ZSCAN18Q8TBC5 510 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-210ENST00000547654 GZF1Q9H116 711 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-210ENST00000547654 MAPK8IP1Q9UQF2 711 aa6.94□□□□□ -1.3
SCAF11-210ENST00000547654 FAM155AB1AL88 458 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-210ENST00000547654 FANCGO15287 622 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 GLI1P08151 1106 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 ZBTB37Q5TC79 503 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 ALG1LQ6GMV1 187 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 MPRIPQ6WCQ1 1025 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 TPTE2Q6XPS3 522 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 ARMCX6Q7L4S7 300 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 UBE3DQ7Z6J8 389 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 KCT2Q8NC54 265 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 ELMO3Q96BJ8 720 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 KIRREL1Q96J84 757 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 CEP44Q9C0F1 390 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 SRCIN1Q9C0H9 1055 aa6.93□□□□□ -1.3
SCAF11-210ENST00000547654 CARS2Q9HA77 564 aaKnown RBP6.93□□□□□ -1.3
SCAF11-210ENST00000547654 GIPC1O14908 333 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 TRIM37O94972 964 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 NTF4P34130 210 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 MAPK8P45983 427 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 RING1Q06587 406 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 FYB2Q5VWT5 728 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 LLGL2Q6P1M3 1020 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 CYFIP1Q7L576 1253 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 C12orf40Q86WS4 652 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 RGS22Q8NE09 1264 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 LMCD1Q9NZU5 365 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 PCDHA4Q9UN74 947 aa6.92□□□□□ -1.3
SCAF11-210ENST00000547654 ANKRD33BA6NCL7 494 aa6.91□□□□□ -1.3
SCAF11-210ENST00000547654 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms