RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 RXRBP28702 533 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 SLC39A14Q15043 492 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 CT47A1Q5JQC4 288 aaPredicted RBP12.18□□□□□ -0.46
NPAS3-205ENST00000547068 ADGRG1Q9Y653 693 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 ERVV-2B6SEH9 535 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 KIF28PB7ZC32 967 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 E7EWF7 191 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 KCNQ3O43525 872 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 CABP4P57796 275 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 PDE4BQ07343 736 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 SEPT12Q8IYM1 358 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 ANKRD20A12PQ8NF67 263 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.18□□□□□ -0.46
NPAS3-205ENST00000547068 RAI14Q9P0K7 980 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 HPSEQ9Y251 543 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 RFX7Q2KHR2 1363 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 A0A0U1RQJ8 604 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 AKR1B15C9JRZ8 316 aaPredicted RBP12.17□□□□□ -0.46
NPAS3-205ENST00000547068 TFRCP02786 760 aaKnown RBP12.17□□□□□ -0.46
NPAS3-205ENST00000547068 CDC27P30260 824 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 MAP2K2P36507 400 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 MNAT1P51948 309 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 CTCFLQ8NI51 663 aaPredicted RBP12.17□□□□□ -0.46
NPAS3-205ENST00000547068 ATRIPQ8WXE1 791 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 GJB4Q9NTQ9 266 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 DBNLQ9UJU6 430 aaKnown RBP12.17□□□□□ -0.46
NPAS3-205ENST00000547068 NFE2L3Q9Y4A8 694 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 CEP83Q9Y592 693 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 PCDHA5Q9Y5H7 936 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 BTBD11A6QL63 1104 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 SYF2O95926 243 aaKnown RBP12.17□□□□□ -0.46
NPAS3-205ENST00000547068 LIG3P49916 1009 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 SHC4Q6S5L8 630 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 RAD9BQ6WBX8 426 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 DDX46Q7L014 1031 aaKnown RBP12.17□□□□□ -0.46
NPAS3-205ENST00000547068 METTL16Q86W50 562 aaKnown RBP12.17□□□□□ -0.46
NPAS3-205ENST00000547068 PANX2Q96RD6 677 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 SLC52A2Q9HAB3 445 aa12.17□□□□□ -0.46
NPAS3-205ENST00000547068 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 WHAMMP3Q1A5X7 153 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 CCDC102BQ68D86 513 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 FOXP4Q8IVH2 680 aaPredicted RBP12.16□□□□□ -0.46
NPAS3-205ENST00000547068 SLC35F6Q8N357 371 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 JMYQ8N9B5 988 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 LINS1Q8NG48 757 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 KAT2BQ92831 832 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 SMARCC1Q92922 1105 aaPredicted RBP12.16□□□□□ -0.46
NPAS3-205ENST00000547068 VIPAS39Q9H9C1 493 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
NPAS3-205ENST00000547068 SHANK3Q9BYB0 1731 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 A0A0G2JLW4 131 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 PRPF6O94906 941 aaKnown RBP12.16□□□□□ -0.46
NPAS3-205ENST00000547068 BMP6P22004 513 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 AARSP49588 968 aaKnown RBP eCLIP12.16□□□□□ -0.46
NPAS3-205ENST00000547068 KIF23Q02241 960 aaPredicted RBP12.16□□□□□ -0.46
NPAS3-205ENST00000547068 WDR93Q6P2C0 686 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 MARCH10Q8NA82 808 aaPredicted RBP12.16□□□□□ -0.46
NPAS3-205ENST00000547068 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
NPAS3-205ENST00000547068 SCN11AQ9UI33 1791 aa12.16□□□□□ -0.46
NPAS3-205ENST00000547068 ZNF18P17022 549 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 ATP6V1AP38606 617 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 USP8P40818 1118 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 LONRF3Q496Y0 759 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 TNNI3KQ59H18 835 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 IGSF22Q8N9C0 903 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 NOA1Q8NC60 698 aaKnown RBP12.15□□□□□ -0.46
NPAS3-205ENST00000547068 NAPGQ99747 312 aaPredicted RBP12.15□□□□□ -0.46
NPAS3-205ENST00000547068 FPGT-TNNI3KV9GXZ4 949 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 KDM6AO15550 1401 aaPredicted RBP12.15□□□□□ -0.46
NPAS3-205ENST00000547068 UTYO14607 1347 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 SH3TC1Q8TE82 1336 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 EBAG9O00559 213 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 CPLX1O14810 134 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 PPP6R2O75170 966 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 HNRNPH1P31943 449 aaKnown RBP12.15□□□□□ -0.46
NPAS3-205ENST00000547068 CCT5P48643 541 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 PROSER3Q2NL68 480 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 PPFIBP1Q86W92 1011 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 BANK1Q8NDB2 785 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 CPLX3Q8WVH0 158 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 CLIC6Q96NY7 704 aa12.15□□□□□ -0.46
NPAS3-205ENST00000547068 RGS17Q9UGC6 210 aaPredicted RBP12.15□□□□□ -0.46
NPAS3-205ENST00000547068 AKAP17AQ02040 695 aaKnown RBP12.14□□□□□ -0.47
NPAS3-205ENST00000547068 FMR1Q06787 632 aaKnown RBP eCLIP12.14□□□□□ -0.47
NPAS3-205ENST00000547068 NR1I3Q14994 352 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 TTLL5Q6EMB2 1281 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 RASGRP2Q7LDG7 609 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 TRMT44Q8IYL2 757 aaKnown RBP12.14□□□□□ -0.47
NPAS3-205ENST00000547068 CCDC148Q8NFR7 591 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 CDC5LQ99459 802 aaKnown RBP12.14□□□□□ -0.47
NPAS3-205ENST00000547068 HAUS7Q99871 368 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 TEX13AQ9BXU3 409 aaPredicted RBP12.14□□□□□ -0.47
NPAS3-205ENST00000547068 GPHNQ9NQX3 736 aaPredicted RBP12.14□□□□□ -0.47
NPAS3-205ENST00000547068 TMOD3Q9NYL9 352 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 DONSONQ9NYP3 566 aa12.14□□□□□ -0.47
NPAS3-205ENST00000547068 HOOK1Q9UJC3 728 aaKnown RBP12.14□□□□□ -0.47
NPAS3-205ENST00000547068 FAM169AQ9Y6X4 670 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms