RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 ORC4O43929 436 aa21.64■■□□□ 1.05
VDR-204ENST00000547065 LDHBP07195 334 aaKnown RBP21.64■■□□□ 1.05
VDR-204ENST00000547065 U2AF2P26368 475 aaKnown RBP eCLIP21.64■■□□□ 1.05
VDR-204ENST00000547065 GPSM2P81274 684 aa21.64■■□□□ 1.05
VDR-204ENST00000547065 GNL2Q13823 731 aaKnown RBP21.64■■□□□ 1.05
VDR-204ENST00000547065 IQCA1Q86XH1 822 aa21.64■■□□□ 1.05
VDR-204ENST00000547065 CRACR2BQ8N4Y2 399 aaPredicted RBP21.64■■□□□ 1.05
VDR-204ENST00000547065 MRPS27Q92552 414 aaKnown RBP21.64■■□□□ 1.05
VDR-204ENST00000547065 USP25Q9UHP3 1055 aa21.64■■□□□ 1.05
VDR-204ENST00000547065 NOL7Q9UMY1 257 aaKnown RBP21.64■■□□□ 1.05
VDR-204ENST00000547065 KINO60870 393 aaKnown RBP21.63■■□□□ 1.05
VDR-204ENST00000547065 CAVIN2O95810 425 aa21.63■■□□□ 1.05
VDR-204ENST00000547065 HOXA10P31260 410 aaPredicted RBP21.63■■□□□ 1.05
VDR-204ENST00000547065 ARPP21Q9UBL0 812 aaPredicted RBP21.63■■□□□ 1.05
VDR-204ENST00000547065 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.63■■□□□ 1.05
VDR-204ENST00000547065 UBR3Q6ZT12 1888 aa21.62■■□□□ 1.05
VDR-204ENST00000547065 SMIM22K7EJ46 135 aa21.62■■□□□ 1.05
VDR-204ENST00000547065 NBPF11Q86T75 865 aa21.62■■□□□ 1.05
VDR-204ENST00000547065 ENAHQ8N8S7 591 aaPredicted RBP21.62■■□□□ 1.05
VDR-204ENST00000547065 NUP133Q8WUM0 1156 aa21.62■■□□□ 1.05
VDR-204ENST00000547065 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.62■■□□□ 1.05
VDR-204ENST00000547065 DEXIO95424 95 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 ADCY5O95622 1261 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 SLC39A14Q15043 492 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 CATIPQ7Z7H3 387 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 CRAMP1Q96RY5 1269 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 JAG2Q9Y219 1238 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 LDHCP07864 332 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 CALM1P0DP23 149 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 CALM2P0DP24 149 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 CALM3P0DP25 149 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 MSNP26038 577 aaKnown RBP21.61■■□□□ 1.05
VDR-204ENST00000547065 NT5C2P49902 561 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 SAFBQ15424 915 aaKnown RBP eCLIP21.61■■□□□ 1.05
VDR-204ENST00000547065 TXNRD1Q16881 649 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 ANO6Q4KMQ2 910 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 IFIT1BQ5T764 474 aaKnown RBP21.61■■□□□ 1.05
VDR-204ENST00000547065 FMR1NBQ8N0W7 255 aaPredicted RBP21.61■■□□□ 1.05
VDR-204ENST00000547065 GGA1Q9UJY5 639 aa21.61■■□□□ 1.05
VDR-204ENST00000547065 KLRG2A4D1S0 409 aaPredicted RBP21.6■■□□□ 1.05
VDR-204ENST00000547065 POLRMTO00411 1230 aaKnown RBP21.6■■□□□ 1.05
VDR-204ENST00000547065 UFL1O94874 794 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 BAG3O95817 575 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 PTMAP06454 111 aaKnown RBP21.59■■□□□ 1.05
VDR-204ENST00000547065 PPP4CP60510 307 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 PDE4BQ07343 736 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 DDR1Q08345 913 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 PROM2Q8N271 834 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 RBM28Q9NW13 759 aaKnown RBP21.59■■□□□ 1.05
VDR-204ENST00000547065 PODXL2Q9NZ53 605 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 DUOX1Q9NRD9 1551 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 MYH13Q9UKX3 1938 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 PPP6R2O75170 966 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 PRDM1O75626 825 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 MMP1P03956 469 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 CMA1P23946 247 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 GUCY1A2P33402 732 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 TMC4Q7Z404 712 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 JMYQ8N9B5 988 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 RNF26Q9BY78 433 aaPredicted RBP21.59■■□□□ 1.05
VDR-204ENST00000547065 CBX8Q9HC52 389 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 CD209Q9NNX6 404 aa21.59■■□□□ 1.05
VDR-204ENST00000547065 IL1R1P14778 569 aa21.58■■□□□ 1.04
VDR-204ENST00000547065 SLC51AQ86UW1 340 aa21.58■■□□□ 1.04
VDR-204ENST00000547065 CERS3Q8IU89 383 aa21.58■■□□□ 1.04
VDR-204ENST00000547065 NOL10Q9BSC4 688 aaKnown RBP21.58■■□□□ 1.04
VDR-204ENST00000547065 MAST2Q6P0Q8 1798 aa21.58■■□□□ 1.04
VDR-204ENST00000547065 DDAH1O94760 285 aa21.57■■□□□ 1.04
VDR-204ENST00000547065 AKAP17AQ02040 695 aaKnown RBP21.57■■□□□ 1.04
VDR-204ENST00000547065 AXDND1Q5T1B0 1012 aaPredicted RBP21.57■■□□□ 1.04
VDR-204ENST00000547065 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
VDR-204ENST00000547065 NOSTRINQ8IVI9 506 aa21.57■■□□□ 1.04
VDR-204ENST00000547065 FOXP1Q9H334 677 aaPredicted RBP21.57■■□□□ 1.04
VDR-204ENST00000547065 MCM9Q9NXL9 1143 aa21.57■■□□□ 1.04
VDR-204ENST00000547065 ZKSCAN5Q9Y2L8 839 aa21.57■■□□□ 1.04
VDR-204ENST00000547065 A0A1B0GVL5 298 aa21.56■■□□□ 1.04
VDR-204ENST00000547065 UBE2Q2LH0YL09 131 aa21.56■■□□□ 1.04
VDR-204ENST00000547065 USP5P45974 858 aa21.56■■□□□ 1.04
VDR-204ENST00000547065 NDUFA8P51970 172 aa21.56■■□□□ 1.04
VDR-204ENST00000547065 CCDC82Q8N4S0 544 aa21.56■■□□□ 1.04
VDR-204ENST00000547065 GPR101Q96P66 508 aaPredicted RBP21.56■■□□□ 1.04
VDR-204ENST00000547065 MAP3K14Q99558 947 aa21.56■■□□□ 1.04
VDR-204ENST00000547065 MKRN1Q9UHC7 482 aaKnown RBP21.56■■□□□ 1.04
VDR-204ENST00000547065 CYP2D6P10635 497 aa21.56■■□□□ 1.04
VDR-204ENST00000547065 PTPAQ15257 358 aa21.56■■□□□ 1.04
VDR-204ENST00000547065 STX1AQ16623 288 aa21.56■■□□□ 1.04
VDR-204ENST00000547065 CCDC88AQ3V6T2 1871 aa21.55■■□□□ 1.04
VDR-204ENST00000547065 PRPF3O43395 683 aaKnown RBP21.55■■□□□ 1.04
VDR-204ENST00000547065 XBP1P17861 261 aa21.55■■□□□ 1.04
VDR-204ENST00000547065 ZNF165P49910 485 aa21.55■■□□□ 1.04
VDR-204ENST00000547065 TROAPQ12815 778 aa21.55■■□□□ 1.04
VDR-204ENST00000547065 C12orf60Q5U649 245 aa21.55■■□□□ 1.04
VDR-204ENST00000547065 DIS3L2Q8IYB7 885 aaKnown RBP21.55■■□□□ 1.04
VDR-204ENST00000547065 SH3RF3Q8TEJ3 882 aaPredicted RBP21.55■■□□□ 1.04
VDR-204ENST00000547065 SDF4Q9BRK5 362 aa21.55■■□□□ 1.04
VDR-204ENST00000547065 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.55■■□□□ 1.04
VDR-204ENST00000547065 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.55■■□□□ 1.04
VDR-204ENST00000547065 TAOK2Q9UL54 1235 aa21.55■■□□□ 1.04
VDR-204ENST00000547065 BAZ2AQ9UIF9 1905 aaKnown RBP21.54■■□□□ 1.04
VDR-204ENST00000547065 BTBD18B2RXH4 712 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms