RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 NOL7Q9UMY1 257 aaKnown RBP14.71□□□□□ -0.05
SCAF11-209ENST00000547018 VEGFAP15692 232 aaPredicted RBP14.71□□□□□ -0.05
SCAF11-209ENST00000547018 EIF6P56537 245 aaKnown RBP14.71□□□□□ -0.05
SCAF11-209ENST00000547018 NOM1Q5C9Z4 860 aaKnown RBP14.71□□□□□ -0.05
SCAF11-209ENST00000547018 FNBP4Q8N3X1 1017 aaPredicted RBP14.71□□□□□ -0.05
SCAF11-209ENST00000547018 CRNKL1Q9BZJ0 848 aaKnown RBP14.71□□□□□ -0.05
SCAF11-209ENST00000547018 GOLGA8HP0CJ92 632 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 SLURP2P0DP57 97 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 GNAT2P19087 354 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 ATP2B2Q01814 1243 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 ARID5BQ14865 1188 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 PRR5LQ6MZQ0 368 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 CTR9Q6PD62 1173 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 RIOK1Q9BRS2 568 aaKnown RBP14.7□□□□□ -0.06
SCAF11-209ENST00000547018 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.7□□□□□ -0.06
SCAF11-209ENST00000547018 LAMA4Q16363 1823 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 USP17L3A6NCW0 530 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 USP17L4A6NCW7 530 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 ZNF202O95125 648 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 PFKFB1P16118 471 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 DOK7Q18PE1 504 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 USP17L1Q7RTZ2 530 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 CATIPQ7Z7H3 387 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 GRAMD1CQ8IYS0 662 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 SPEF2Q9C093 1822 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 SLC3A2P08195 630 aaKnown RBP14.7□□□□□ -0.06
SCAF11-209ENST00000547018 SNW1Q13573 536 aaKnown RBP14.7□□□□□ -0.06
SCAF11-209ENST00000547018 SH3RF3Q8TEJ3 882 aaPredicted RBP14.7□□□□□ -0.06
SCAF11-209ENST00000547018 PAPPAQ13219 1627 aa14.7□□□□□ -0.06
SCAF11-209ENST00000547018 FOXN1O15353 648 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 SMC2O95347 1197 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 SYKP43405 635 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 PNOCQ13519 176 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 ZNF827Q17R98 1081 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 DPCR1Q3MIW9 517 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 HOMER1Q86YM7 354 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 NOL10Q9BSC4 688 aaKnown RBP14.69□□□□□ -0.06
SCAF11-209ENST00000547018 DCP1AQ9NPI6 582 aaPredicted RBP14.69□□□□□ -0.06
SCAF11-209ENST00000547018 MYH3P11055 1940 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 LMOD1P29536 600 aaPredicted RBP14.69□□□□□ -0.06
SCAF11-209ENST00000547018 GPSM2P81274 684 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 TFAP4Q01664 338 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 NTRK3Q16288 839 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 ZNF622Q969S3 477 aaKnown RBP eCLIP14.69□□□□□ -0.061e-6■■□□□ 11.4
SCAF11-209ENST00000547018 UIMC1Q96RL1 719 aa14.69□□□□□ -0.06
SCAF11-209ENST00000547018 ZSCAN10Q96SZ4 725 aaPredicted RBP14.69□□□□□ -0.06
SCAF11-209ENST00000547018 PDIA4P13667 645 aaKnown RBP14.68□□□□□ -0.06
SCAF11-209ENST00000547018 GPKOWQ92917 476 aaPredicted RBP eCLIP14.68□□□□□ -0.064e-7■■■□□ 15.4
SCAF11-209ENST00000547018 ANKRD2Q9GZV1 360 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 PCDHB6Q9Y5E3 794 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 CNTNAP4Q9C0A0 1308 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 GTF2IP78347 998 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 ZNF174Q15697 407 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 FBXO33Q7Z6M2 555 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 RASGRP4Q8TDF6 673 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 KCNG4Q8TDN1 519 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 RTEL1Q9NZ71 1219 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 PYCARDQ9ULZ3 195 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 PLCH1Q4KWH8 1693 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 COL1A1P02452 1464 aaPredicted RBP14.68□□□□□ -0.06
SCAF11-209ENST00000547018 CASP1P29466 404 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 SCNN1DP51172 638 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 ADALQ6DHV7 355 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 USP49Q70CQ1 688 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 STAG1Q8WVM7 1258 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 ZNF592Q92610 1267 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 CLIP2Q9UDT6 1046 aa14.68□□□□□ -0.06
SCAF11-209ENST00000547018 MROH7-TTC4A0A0A0MT08 1334 aa14.67□□□□□ -0.06
SCAF11-209ENST00000547018 COBLO75128 1261 aa14.67□□□□□ -0.06
SCAF11-209ENST00000547018 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.67□□□□□ -0.06
SCAF11-209ENST00000547018 TRPC5Q9UL62 973 aaPredicted RBP14.67□□□□□ -0.06
SCAF11-209ENST00000547018 CDC25AP30304 524 aa14.67□□□□□ -0.06
SCAF11-209ENST00000547018 TM4SF1P30408 202 aa14.67□□□□□ -0.06
SCAF11-209ENST00000547018 AFMP43652 599 aa14.67□□□□□ -0.06
SCAF11-209ENST00000547018 UVSSAQ2YD98 709 aa14.67□□□□□ -0.06
SCAF11-209ENST00000547018 MFSD14BQ5SR56 506 aa14.67□□□□□ -0.06
SCAF11-209ENST00000547018 CTCFLQ8NI51 663 aaPredicted RBP14.67□□□□□ -0.06
SCAF11-209ENST00000547018 ALX1Q15699 326 aa14.67□□□□□ -0.06
SCAF11-209ENST00000547018 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
SCAF11-209ENST00000547018 BRAPQ7Z569 592 aa14.67□□□□□ -0.06
SCAF11-209ENST00000547018 CRACR2BQ8N4Y2 399 aaPredicted RBP14.67□□□□□ -0.06
SCAF11-209ENST00000547018 BAZ2AQ9UIF9 1905 aaKnown RBP14.66□□□□□ -0.06
SCAF11-209ENST00000547018 AHDC1Q5TGY3 1603 aaPredicted RBP14.66□□□□□ -0.06
SCAF11-209ENST00000547018 LTBP4Q8N2S1 1624 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 GYS1P13807 737 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 LIFRP42702 1097 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 EVCP57679 992 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 ST5P78524 1137 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 STX1AQ16623 288 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 KLHL10Q6JEL2 608 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 CLEC10AQ8IUN9 316 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 CNNM3Q8NE01 707 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 APBA3O96018 575 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 PLCD1P51178 756 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 CEP57L1Q8IYX8 460 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 PLIN2Q99541 437 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 FAM13BQ9NYF5 915 aa14.66□□□□□ -0.06
SCAF11-209ENST00000547018 POLR2DO15514 142 aaKnown RBP14.65□□□□□ -0.06
SCAF11-209ENST00000547018 GRAPQ13588 217 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 KRT27Q7Z3Y8 459 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms